RNA–Protein interactions for RNA: ENST00000593641.3

SSBP4-203, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-203ENST00000593641 ZNF256Q9Y2P7 627 aaPredicted RBP17.69■□□□□ 0.42
SSBP4-203ENST00000593641 MRPS28Q9Y2Q9 187 aaKnown RBP17.69■□□□□ 0.42
SSBP4-203ENST00000593641 TRBV5-5A0A0J9YX44 114 aa17.68■□□□□ 0.42
SSBP4-203ENST00000593641 CA11O75493 328 aa17.68■□□□□ 0.42
SSBP4-203ENST00000593641 WBP4O75554 376 aaKnown RBP17.68■□□□□ 0.42
SSBP4-203ENST00000593641 OR8U8P0C7N1 319 aa17.68■□□□□ 0.42
SSBP4-203ENST00000593641 YIF1BQ5BJH7 314 aa17.68■□□□□ 0.42
SSBP4-203ENST00000593641 AWAT2Q6E213 333 aa17.68■□□□□ 0.42
SSBP4-203ENST00000593641 TMEM65Q6PI78 240 aa17.68■□□□□ 0.42
SSBP4-203ENST00000593641 GLIPR1L1Q6UWM5 242 aa17.68■□□□□ 0.42
SSBP4-203ENST00000593641 OR2S2Q9NQN1 319 aa17.68■□□□□ 0.42
SSBP4-203ENST00000593641 CHCHD3Q9NX63 227 aaKnown RBP17.68■□□□□ 0.42
SSBP4-203ENST00000593641 EXOSC1Q9Y3B2 195 aaKnown RBP17.68■□□□□ 0.42
SSBP4-203ENST00000593641 PEX16Q9Y5Y5 336 aa17.68■□□□□ 0.42
SSBP4-203ENST00000593641 LANCL1O43813 399 aa17.67■□□□□ 0.42
SSBP4-203ENST00000593641 GPX5O75715 221 aa17.67■□□□□ 0.42
SSBP4-203ENST00000593641 LY86O95711 162 aa17.67■□□□□ 0.42
SSBP4-203ENST00000593641 FSTP19883 344 aa17.67■□□□□ 0.42
SSBP4-203ENST00000593641 VHLP40337 213 aa17.67■□□□□ 0.42
SSBP4-203ENST00000593641 MED21Q13503 144 aa17.67■□□□□ 0.42
SSBP4-203ENST00000593641 NKAPLQ5M9Q1 402 aa17.67■□□□□ 0.42
SSBP4-203ENST00000593641 RBMXL1Q96E39 390 aaKnown RBP17.67■□□□□ 0.42
SSBP4-203ENST00000593641 UBE2E2Q96LR5 201 aa17.67■□□□□ 0.42
SSBP4-203ENST00000593641 ASCL2Q99929 193 aa17.67■□□□□ 0.42
SSBP4-203ENST00000593641 LALBAP00709 142 aa17.66■□□□□ 0.42
SSBP4-203ENST00000593641 RCC1P18754 421 aaPredicted RBP17.66■□□□□ 0.42
SSBP4-203ENST00000593641 INSL3P51460 131 aa17.66■□□□□ 0.42
SSBP4-203ENST00000593641 GAPTQ8N292 157 aa17.66■□□□□ 0.42
SSBP4-203ENST00000593641 MYOZ3Q8TDC0 251 aa17.66■□□□□ 0.42
SSBP4-203ENST00000593641 ABHD14AQ9BUJ0 271 aa17.66■□□□□ 0.42
SSBP4-203ENST00000593641 SELENOIQ9C0D9 397 aa17.66■□□□□ 0.42
SSBP4-203ENST00000593641 KCNIP1Q9NZI2 227 aa17.66■□□□□ 0.42
SSBP4-203ENST00000593641 DIMT1Q9UNQ2 313 aaKnown RBP17.66■□□□□ 0.42
SSBP4-203ENST00000593641 VSIG4Q9Y279 399 aa17.66■□□□□ 0.42
SSBP4-203ENST00000593641 HUWE1Q7Z6Z7 4374 aaKnown RBP17.65■□□□□ 0.42
SSBP4-203ENST00000593641 TRAV8-7A0A075B6U6 113 aa17.65■□□□□ 0.42
SSBP4-203ENST00000593641 FAM90A10PA6NDY2 464 aa17.65■□□□□ 0.42
SSBP4-203ENST00000593641 FAM90A7PA6NKC0 464 aa17.65■□□□□ 0.42
SSBP4-203ENST00000593641 FAM90A23PA8MXZ1 464 aa17.65■□□□□ 0.42
SSBP4-203ENST00000593641 ZNF616Q08AN1 781 aa17.65■□□□□ 0.42
SSBP4-203ENST00000593641 MORN2Q502X0 79 aa17.65■□□□□ 0.42
SSBP4-203ENST00000593641 DMKNQ6E0U4 476 aaPredicted RBP17.65■□□□□ 0.42
SSBP4-203ENST00000593641 PQLC1Q8N2U9 271 aa17.65■□□□□ 0.42
SSBP4-203ENST00000593641 OR1N2Q8NGR9 330 aa17.65■□□□□ 0.42
SSBP4-203ENST00000593641 RDH12Q96NR8 316 aa17.65■□□□□ 0.42
SSBP4-203ENST00000593641 ZNF251Q9BRH9 671 aa17.65■□□□□ 0.42
SSBP4-203ENST00000593641 BANF2Q9H503 90 aa17.65■□□□□ 0.42
SSBP4-203ENST00000593641 TAF9BQ9HBM6 251 aa17.65■□□□□ 0.42
SSBP4-203ENST00000593641 S100A14Q9HCY8 104 aa17.65■□□□□ 0.42
SSBP4-203ENST00000593641 SMPD3Q9NY59 655 aaPredicted RBP17.65■□□□□ 0.42
SSBP4-203ENST00000593641 JPT1Q9UK76 154 aa17.65■□□□□ 0.42
SSBP4-203ENST00000593641 WSB1Q9Y6I7 421 aa17.65■□□□□ 0.42
SSBP4-203ENST00000593641 C3orf84H3BNL1 204 aa17.64■□□□□ 0.41
SSBP4-203ENST00000593641 CRTAPO75718 401 aaPredicted RBP17.64■□□□□ 0.41
SSBP4-203ENST00000593641 SC5DO75845 299 aa17.64■□□□□ 0.41
SSBP4-203ENST00000593641 MGMTP16455 207 aa17.64■□□□□ 0.41
SSBP4-203ENST00000593641 CHATP28329 748 aa17.64■□□□□ 0.41
SSBP4-203ENST00000593641 ACTBP60709 375 aa17.64■□□□□ 0.41
SSBP4-203ENST00000593641 ADARB1P78563 741 aaKnown RBP17.64■□□□□ 0.41
SSBP4-203ENST00000593641 ZFP41Q8N8Y5 198 aa17.64■□□□□ 0.41
SSBP4-203ENST00000593641 PGLYRP3Q96LB9 341 aa17.64■□□□□ 0.41
SSBP4-203ENST00000593641 OR14A2Q96R54 314 aa17.64■□□□□ 0.41
SSBP4-203ENST00000593641 GNB4Q9HAV0 340 aa17.64■□□□□ 0.41
SSBP4-203ENST00000593641 PARP11Q9NR21 331 aa17.64■□□□□ 0.41
SSBP4-203ENST00000593641 CLEC2DQ9UHP7 191 aa17.64■□□□□ 0.41
SSBP4-203ENST00000593641 A0A1W2PPK0 400 aa17.63■□□□□ 0.41
SSBP4-203ENST00000593641 UBE2QL1A1L167 161 aa17.63■□□□□ 0.41
SSBP4-203ENST00000593641 G3V318 75 aa17.63■□□□□ 0.41
SSBP4-203ENST00000593641 ATP6V0E1O15342 81 aa17.63■□□□□ 0.41
SSBP4-203ENST00000593641 HLA-DRB1P01911 266 aa17.63■□□□□ 0.41
SSBP4-203ENST00000593641 MAS1P04201 325 aa17.63■□□□□ 0.41
SSBP4-203ENST00000593641 GLAP06280 429 aa17.63■□□□□ 0.41
SSBP4-203ENST00000593641 FUT3P21217 361 aa17.63■□□□□ 0.41
SSBP4-203ENST00000593641 PPIFP30405 207 aaKnown RBP17.63■□□□□ 0.41
SSBP4-203ENST00000593641 RPS11P62280 158 aaKnown RBP eCLIP17.63■□□□□ 0.41
SSBP4-203ENST00000593641 RUNX1Q01196 453 aa17.63■□□□□ 0.41
SSBP4-203ENST00000593641 FAM27D1Q5T7N8 215 aa17.63■□□□□ 0.41
SSBP4-203ENST00000593641 ZNF554Q86TJ5 538 aa17.63■□□□□ 0.41
SSBP4-203ENST00000593641 CDH26Q8IXH8 852 aa17.63■□□□□ 0.41
SSBP4-203ENST00000593641 ZNF491Q8N8L2 437 aa17.63■□□□□ 0.41
SSBP4-203ENST00000593641 OR5B12Q96R08 314 aa17.63■□□□□ 0.41
SSBP4-203ENST00000593641 MRPL20Q9BYC9 149 aaKnown RBP17.63■□□□□ 0.41
SSBP4-203ENST00000593641 KLK15Q9H2R5 256 aa17.63■□□□□ 0.41
SSBP4-203ENST00000593641 OR51J1Q9H342 316 aa17.63■□□□□ 0.41
SSBP4-203ENST00000593641 MBNL3Q9NUK0 354 aaKnown RBP17.63■□□□□ 0.41
SSBP4-203ENST00000593641 SMAD5-AS1Q9Y6J3 95 aa17.63■□□□□ 0.41
SSBP4-203ENST00000593641 I3L521 148 aa17.62■□□□□ 0.41
SSBP4-203ENST00000593641 NBR2O15453 112 aa17.62■□□□□ 0.41
SSBP4-203ENST00000593641 RGS11O94810 467 aa17.62■□□□□ 0.41
SSBP4-203ENST00000593641 CAPGP40121 348 aa17.62■□□□□ 0.41
SSBP4-203ENST00000593641 GNMTQ14749 295 aa17.62■□□□□ 0.41
SSBP4-203ENST00000593641 OR52L2PQ8NGH6 319 aa17.62■□□□□ 0.41
SSBP4-203ENST00000593641 TMEM80Q96HE8 168 aa17.62■□□□□ 0.41
SSBP4-203ENST00000593641 Q96M66 194 aa17.62■□□□□ 0.41
SSBP4-203ENST00000593641 KIAA1456Q9P272 454 aa17.62■□□□□ 0.41
SSBP4-203ENST00000593641 TRBV5-7A0A0A0MS05 114 aa17.61■□□□□ 0.41
SSBP4-203ENST00000593641 TRAV41A0A0B4J266 112 aa17.61■□□□□ 0.41
SSBP4-203ENST00000593641 PPP1CCP36873 323 aaKnown RBP17.61■□□□□ 0.41
SSBP4-203ENST00000593641 TAS2R43P59537 309 aa17.61■□□□□ 0.41
SSBP4-203ENST00000593641 ZNF429Q86V71 674 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms