RNA–Protein interactions for RNA: ENST00000593582.5

TRIM28-203, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-203ENST00000593582 FGF16O43320 207 aa12.14□□□□□ -0.47
TRIM28-203ENST00000593582 TXNL1O43396 289 aa12.14□□□□□ -0.47
TRIM28-203ENST00000593582 CALRP27797 417 aaKnown RBP12.14□□□□□ -0.47
TRIM28-203ENST00000593582 CHATP28329 748 aa12.14□□□□□ -0.47
TRIM28-203ENST00000593582 CD83Q01151 205 aa12.14□□□□□ -0.47
TRIM28-203ENST00000593582 UNC119Q13432 240 aa12.14□□□□□ -0.47
TRIM28-203ENST00000593582 TBCEQ15813 527 aaPredicted RBP12.14□□□□□ -0.47
TRIM28-203ENST00000593582 PDLIM3Q53GG5 364 aaPredicted RBP12.14□□□□□ -0.47
TRIM28-203ENST00000593582 C6orf201Q7Z4U5 140 aa12.14□□□□□ -0.47
TRIM28-203ENST00000593582 C5orf56Q8N8D9 126 aa12.14□□□□□ -0.47
TRIM28-203ENST00000593582 OR4X2Q8NGF9 303 aa12.14□□□□□ -0.47
TRIM28-203ENST00000593582 MRPL30Q8TCC3 161 aaKnown RBP12.14□□□□□ -0.47
TRIM28-203ENST00000593582 SULT4A1Q9BR01 284 aa12.14□□□□□ -0.47
TRIM28-203ENST00000593582 TM2D1Q9BX74 207 aa12.14□□□□□ -0.47
TRIM28-203ENST00000593582 ACOT13Q9NPJ3 140 aa12.14□□□□□ -0.47
TRIM28-203ENST00000593582 AK6Q9Y3D8 172 aaKnown RBP12.14□□□□□ -0.47
TRIM28-203ENST00000593582 IGHV3-72A0A0B4J1Y9 119 aa12.13□□□□□ -0.47
TRIM28-203ENST00000593582 TCRBV4S1A1TA0A5B7 111 aa12.13□□□□□ -0.47
TRIM28-203ENST00000593582 ADARB2-AS1A8MUL3 147 aa12.13□□□□□ -0.47
TRIM28-203ENST00000593582 TMEM14DPA8MWL7 114 aa12.13□□□□□ -0.47
TRIM28-203ENST00000593582 SLC17A2O00624 439 aa12.13□□□□□ -0.47
TRIM28-203ENST00000593582 SLC31A2O15432 143 aa12.13□□□□□ -0.47
TRIM28-203ENST00000593582 ATP6V1G2O95670 118 aa12.13□□□□□ -0.47
TRIM28-203ENST00000593582 ARSBP15848 533 aa12.13□□□□□ -0.47
TRIM28-203ENST00000593582 RANBP1P43487 201 aa12.13□□□□□ -0.47
TRIM28-203ENST00000593582 ZNF134P52741 427 aa12.13□□□□□ -0.47
TRIM28-203ENST00000593582 ZNF137PP52743 207 aa12.13□□□□□ -0.47
TRIM28-203ENST00000593582 QRFPP83859 136 aa12.13□□□□□ -0.47
TRIM28-203ENST00000593582 HTD2P86397 168 aa12.13□□□□□ -0.47
TRIM28-203ENST00000593582 FABP5Q01469 135 aa12.13□□□□□ -0.47
TRIM28-203ENST00000593582 EBI3Q14213 229 aa12.13□□□□□ -0.47
TRIM28-203ENST00000593582 CT45A1Q5HYN5 189 aa12.13□□□□□ -0.47
TRIM28-203ENST00000593582 ZNF367Q7RTV3 350 aa12.13□□□□□ -0.47
TRIM28-203ENST00000593582 C1QL4Q86Z23 238 aa12.13□□□□□ -0.47
TRIM28-203ENST00000593582 TGIF2LXQ8IUE1 241 aa12.13□□□□□ -0.47
TRIM28-203ENST00000593582 IZUMO1Q8IYV9 350 aa12.13□□□□□ -0.47
TRIM28-203ENST00000593582 ZNF439Q8NDP4 499 aa12.13□□□□□ -0.47
TRIM28-203ENST00000593582 OR2T10Q8NGZ9 312 aa12.13□□□□□ -0.47
TRIM28-203ENST00000593582 CT45A3Q8NHU0 189 aa12.13□□□□□ -0.47
TRIM28-203ENST00000593582 ST6GALNAC6Q969X2 333 aa12.13□□□□□ -0.47
TRIM28-203ENST00000593582 NICN1Q9BSH3 213 aa12.13□□□□□ -0.47
TRIM28-203ENST00000593582 URM1Q9BTM9 101 aaKnown RBP12.13□□□□□ -0.47
TRIM28-203ENST00000593582 FAAP24Q9BTP7 215 aa12.13□□□□□ -0.47
TRIM28-203ENST00000593582 KCNK15Q9H427 330 aa12.13□□□□□ -0.47
TRIM28-203ENST00000593582 PLEKHJ1Q9NW61 149 aa12.13□□□□□ -0.47
TRIM28-203ENST00000593582 LRRC42Q9Y546 428 aa12.13□□□□□ -0.47
TRIM28-203ENST00000593582 A0A1W2PRX2 142 aa12.12□□□□□ -0.47
TRIM28-203ENST00000593582 NCBP2LA6PVI3 153 aaKnown RBP12.12□□□□□ -0.47
TRIM28-203ENST00000593582 CD1BP29016 333 aa12.12□□□□□ -0.47
TRIM28-203ENST00000593582 BLVRBP30043 206 aaPredicted RBP12.12□□□□□ -0.47
TRIM28-203ENST00000593582 PSMD7P51665 324 aa12.12□□□□□ -0.47
TRIM28-203ENST00000593582 P2RY14Q15391 338 aa12.12□□□□□ -0.47
TRIM28-203ENST00000593582 RAB11BQ15907 218 aa12.12□□□□□ -0.47
TRIM28-203ENST00000593582 MORN2Q502X0 79 aa12.12□□□□□ -0.47
TRIM28-203ENST00000593582 OR2W3Q7Z3T1 314 aa12.12□□□□□ -0.47
TRIM28-203ENST00000593582 GALMQ96C23 342 aa12.12□□□□□ -0.47
TRIM28-203ENST00000593582 CYYR1Q96J86 154 aa12.12□□□□□ -0.47
TRIM28-203ENST00000593582 EAF1Q96JC9 268 aaPredicted RBP12.12□□□□□ -0.47
TRIM28-203ENST00000593582 GFI1Q99684 422 aa12.12□□□□□ -0.47
TRIM28-203ENST00000593582 CHMP1AQ9HD42 196 aaPredicted RBP12.12□□□□□ -0.47
TRIM28-203ENST00000593582 ABRACLQ9P1F3 81 aa12.12□□□□□ -0.47
TRIM28-203ENST00000593582 JPT1Q9UK76 154 aa12.12□□□□□ -0.47
TRIM28-203ENST00000593582 TSSC4Q9Y5U2 329 aaPredicted RBP12.12□□□□□ -0.47
TRIM28-203ENST00000593582 RGS11O94810 467 aa12.11□□□□□ -0.47
TRIM28-203ENST00000593582 PF4V1P10720 104 aa12.11□□□□□ -0.47
TRIM28-203ENST00000593582 PPP1CCP36873 323 aaKnown RBP12.11□□□□□ -0.47
TRIM28-203ENST00000593582 TCTEX1D4Q5JR98 221 aa12.11□□□□□ -0.47
TRIM28-203ENST00000593582 OR52L2PQ8NGH6 319 aa12.11□□□□□ -0.47
TRIM28-203ENST00000593582 ABHD14AQ9BUJ0 271 aa12.11□□□□□ -0.47
TRIM28-203ENST00000593582 LPAR5Q9H1C0 372 aa12.11□□□□□ -0.47
TRIM28-203ENST00000593582 RIMS4Q9H426 269 aaPredicted RBP12.11□□□□□ -0.47
TRIM28-203ENST00000593582 A0A0A6YYD4 124 aa12.1□□□□□ -0.47
TRIM28-203ENST00000593582 PSMB11A5LHX3 300 aa12.1□□□□□ -0.47
TRIM28-203ENST00000593582 SERPINE3A8MV23 424 aa12.1□□□□□ -0.47
TRIM28-203ENST00000593582 G3V4G9 280 aa12.1□□□□□ -0.47
TRIM28-203ENST00000593582 LANCL1O43813 399 aa12.1□□□□□ -0.47
TRIM28-203ENST00000593582 YPEL1O60688 119 aa12.1□□□□□ -0.47
TRIM28-203ENST00000593582 NAPSAO96009 420 aa12.1□□□□□ -0.47
TRIM28-203ENST00000593582 MOSP00540 346 aa12.1□□□□□ -0.47
TRIM28-203ENST00000593582 GNMTQ14749 295 aa12.1□□□□□ -0.47
TRIM28-203ENST00000593582 HMGN3Q15651 99 aa12.1□□□□□ -0.47
TRIM28-203ENST00000593582 KHDC1LQ5JSQ8 128 aa12.1□□□□□ -0.47
TRIM28-203ENST00000593582 SLC35E3Q7Z769 313 aa12.1□□□□□ -0.47
TRIM28-203ENST00000593582 FOXRED2Q8IWF2 684 aa12.1□□□□□ -0.47
TRIM28-203ENST00000593582 FAM89BQ8N5H3 189 aa12.1□□□□□ -0.47
TRIM28-203ENST00000593582 Q8N6K4 173 aa12.1□□□□□ -0.47
TRIM28-203ENST00000593582 OR2AK2Q8NG84 335 aa12.1□□□□□ -0.47
TRIM28-203ENST00000593582 OR8H1Q8NGG4 311 aa12.1□□□□□ -0.47
TRIM28-203ENST00000593582 CHPT1Q8WUD6 406 aa12.1□□□□□ -0.47
TRIM28-203ENST00000593582 IL1F10Q8WWZ1 152 aa12.1□□□□□ -0.47
TRIM28-203ENST00000593582 YPEL2Q96QA6 119 aa12.1□□□□□ -0.47
TRIM28-203ENST00000593582 Q9H521 79 aa12.1□□□□□ -0.47
TRIM28-203ENST00000593582 STEAP1Q9UHE8 339 aa12.1□□□□□ -0.47
TRIM28-203ENST00000593582 V9GY05 133 aa12.1□□□□□ -0.47
TRIM28-203ENST00000593582 ZNF736B4DX44 427 aaPredicted RBP12.09□□□□□ -0.47
TRIM28-203ENST00000593582 SOCS1O15524 211 aa12.09□□□□□ -0.47
TRIM28-203ENST00000593582 MRPS14O60783 128 aaKnown RBP12.09□□□□□ -0.47
TRIM28-203ENST00000593582 IGHG2P01859 326 aa12.09□□□□□ -0.47
TRIM28-203ENST00000593582 CLDN12P56749 244 aa12.09□□□□□ -0.47
TRIM28-203ENST00000593582 GABARAPL2P60520 117 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms