RNA–Protein interactions for RNA: ENST00000592299.5

SPHK1-210, Transcript of sphingosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPHK1, Length 1,821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-210ENST00000592299 NEIL1Q96FI4 390 aaPredicted RBP18.83■□□□□ 0.6
SPHK1-210ENST00000592299 RAB9BQ9NP90 201 aa18.83■□□□□ 0.6
SPHK1-210ENST00000592299 CLN8Q9UBY8 286 aa18.83■□□□□ 0.6
SPHK1-210ENST00000592299 ARID1AO14497 2285 aa18.83■□□□□ 0.6
SPHK1-210ENST00000592299 CTSDP07339 412 aaPredicted RBP18.82■□□□□ 0.6
SPHK1-210ENST00000592299 CGB3P0DN86 165 aa18.82■□□□□ 0.6
SPHK1-210ENST00000592299 CGB7P0DN87 165 aa18.82■□□□□ 0.6
SPHK1-210ENST00000592299 UCP3P55916 312 aa18.82■□□□□ 0.6
SPHK1-210ENST00000592299 ZNF273Q14593 569 aa18.82■□□□□ 0.6
SPHK1-210ENST00000592299 C17orf58Q2M2W7 97 aa18.82■□□□□ 0.6
SPHK1-210ENST00000592299 ABCA11PQ4W5N1 156 aa18.82■□□□□ 0.6
SPHK1-210ENST00000592299 ZNF841Q6ZN19 808 aa18.82■□□□□ 0.6
SPHK1-210ENST00000592299 SLC38A6Q8IZM9 456 aa18.82■□□□□ 0.6
SPHK1-210ENST00000592299 CORO2AQ92828 525 aa18.82■□□□□ 0.6
SPHK1-210ENST00000592299 SLC5A7Q9GZV3 580 aa18.82■□□□□ 0.6
SPHK1-210ENST00000592299 ZNF221Q9UK13 617 aa18.82■□□□□ 0.6
SPHK1-210ENST00000592299 ZNF729A6NN14 1252 aaPredicted RBP18.81■□□□□ 0.6
SPHK1-210ENST00000592299 SSNA1O43805 119 aa18.81■□□□□ 0.6
SPHK1-210ENST00000592299 HLA-AP01891 365 aaKnown RBP18.81■□□□□ 0.6
SPHK1-210ENST00000592299 WNT2P09544 360 aa18.81■□□□□ 0.6
SPHK1-210ENST00000592299 VAMP1P23763 118 aa18.81■□□□□ 0.6
SPHK1-210ENST00000592299 PPP1CCP36873 323 aaKnown RBP18.81■□□□□ 0.6
SPHK1-210ENST00000592299 HTD2P86397 168 aa18.81■□□□□ 0.6
SPHK1-210ENST00000592299 PPP1R1AQ13522 171 aa18.81■□□□□ 0.6
SPHK1-210ENST00000592299 TMEM128Q5BJH2 165 aa18.81■□□□□ 0.6
SPHK1-210ENST00000592299 TMEM200BQ69YZ2 307 aa18.81■□□□□ 0.6
SPHK1-210ENST00000592299 PARP12Q9H0J9 701 aaKnown RBP18.81■□□□□ 0.6
SPHK1-210ENST00000592299 GNG12Q9UBI6 72 aa18.81■□□□□ 0.6
SPHK1-210ENST00000592299 LPAR3Q9UBY5 353 aa18.81■□□□□ 0.6
SPHK1-210ENST00000592299 UBE2J1Q9Y385 318 aaPredicted RBP18.81■□□□□ 0.6
SPHK1-210ENST00000592299 CELSR2Q9HCU4 2923 aa18.81■□□□□ 0.6
SPHK1-210ENST00000592299 SSTR2P30874 369 aa18.81■□□□□ 0.6
SPHK1-210ENST00000592299 PDLIM4P50479 330 aa18.81■□□□□ 0.6
SPHK1-210ENST00000592299 DHRS2Q13268 280 aa18.81■□□□□ 0.6
SPHK1-210ENST00000592299 PHLDA2Q53GA4 152 aa18.81■□□□□ 0.6
SPHK1-210ENST00000592299 ZNF626Q68DY1 528 aa18.81■□□□□ 0.6
SPHK1-210ENST00000592299 LPCAT3Q6P1A2 487 aa18.81■□□□□ 0.6
SPHK1-210ENST00000592299 TMEM230Q96A57 120 aa18.81■□□□□ 0.6
SPHK1-210ENST00000592299 MARVELD3Q96A59 401 aa18.81■□□□□ 0.6
SPHK1-210ENST00000592299 MED28Q9H204 178 aa18.81■□□□□ 0.6
SPHK1-210ENST00000592299 MALRD1Q5VYJ5 2156 aa18.8■□□□□ 0.6
SPHK1-210ENST00000592299 SNRPGP15A8MWD9 76 aa18.8■□□□□ 0.6
SPHK1-210ENST00000592299 LUMP51884 338 aaPredicted RBP18.8■□□□□ 0.6
SPHK1-210ENST00000592299 PIGPP57054 158 aa18.8■□□□□ 0.6
SPHK1-210ENST00000592299 RRAS2P62070 204 aaPredicted RBP18.8■□□□□ 0.6
SPHK1-210ENST00000592299 FAHD2BQ6P2I3 314 aaPredicted RBP18.8■□□□□ 0.6
SPHK1-210ENST00000592299 PERPQ96FX8 193 aa18.8■□□□□ 0.6
SPHK1-210ENST00000592299 FAHD2AQ96GK7 314 aa18.8■□□□□ 0.6
SPHK1-210ENST00000592299 BPESC1Q9GZL8 116 aa18.8■□□□□ 0.6
SPHK1-210ENST00000592299 GAL3ST2Q9H3Q3 398 aa18.8■□□□□ 0.6
SPHK1-210ENST00000592299 PATZ1Q9HBE1 687 aaKnown RBP18.8■□□□□ 0.6
SPHK1-210ENST00000592299 TAS2R3Q9NYW6 316 aa18.8■□□□□ 0.6
SPHK1-210ENST00000592299 F2RL2O00254 374 aa18.79■□□□□ 0.6
SPHK1-210ENST00000592299 HSD17B6O14756 317 aa18.79■□□□□ 0.6
SPHK1-210ENST00000592299 CCNKO75909 580 aa18.79■□□□□ 0.6
SPHK1-210ENST00000592299 OR8U9P0C7N5 309 aa18.79■□□□□ 0.6
SPHK1-210ENST00000592299 GNRHRP30968 328 aa18.79■□□□□ 0.6
SPHK1-210ENST00000592299 WDR25Q64LD2 544 aaPredicted RBP18.79■□□□□ 0.6
SPHK1-210ENST00000592299 UXS1Q8NBZ7 420 aa18.79■□□□□ 0.6
SPHK1-210ENST00000592299 OR8U1Q8NH10 309 aa18.79■□□□□ 0.6
SPHK1-210ENST00000592299 ZNF431Q8TF32 576 aaPredicted RBP18.79■□□□□ 0.6
SPHK1-210ENST00000592299 ZNF714Q96N38 554 aa18.79■□□□□ 0.6
SPHK1-210ENST00000592299 RSRP1Q9BUV0 290 aa18.79■□□□□ 0.6
SPHK1-210ENST00000592299 CCL28Q9NRJ3 127 aa18.79■□□□□ 0.6
SPHK1-210ENST00000592299 JPT1Q9UK76 154 aa18.79■□□□□ 0.6
SPHK1-210ENST00000592299 CCL3L1P16619 93 aa18.79■□□□□ 0.6
SPHK1-210ENST00000592299 UBE2MP61081 183 aaKnown RBP18.79■□□□□ 0.6
SPHK1-210ENST00000592299 LYG2Q86SG7 212 aa18.79■□□□□ 0.6
SPHK1-210ENST00000592299 LDLRAD3Q86YD5 345 aa18.79■□□□□ 0.6
SPHK1-210ENST00000592299 CASTOR1Q8WTX7 329 aa18.79■□□□□ 0.6
SPHK1-210ENST00000592299 BARX1Q9HBU1 254 aaPredicted RBP18.79■□□□□ 0.6
SPHK1-210ENST00000592299 SLC2A9Q9NRM0 540 aa18.79■□□□□ 0.6
SPHK1-210ENST00000592299 FBN2P35556 2912 aa18.78■□□□□ 0.6
SPHK1-210ENST00000592299 CENPEQ02224 2701 aa18.78■□□□□ 0.6
SPHK1-210ENST00000592299 TRBV23-1A0A0A0MS06 115 aa18.78■□□□□ 0.6
SPHK1-210ENST00000592299 C9orf170A2RU37 121 aa18.78■□□□□ 0.6
SPHK1-210ENST00000592299 GPR37O15354 613 aa18.78■□□□□ 0.6
SPHK1-210ENST00000592299 NFYBP25208 207 aa18.78■□□□□ 0.6
SPHK1-210ENST00000592299 LOXL3P58215 753 aa18.78■□□□□ 0.6
SPHK1-210ENST00000592299 KRTAP10-9P60411 292 aa18.78■□□□□ 0.6
SPHK1-210ENST00000592299 GNB2P62879 340 aa18.78■□□□□ 0.6
SPHK1-210ENST00000592299 ZNF818PQ6ZRF7 136 aa18.78■□□□□ 0.6
SPHK1-210ENST00000592299 IDI2-AS1Q9NZ38 188 aa18.78■□□□□ 0.6
SPHK1-210ENST00000592299 KCNS2Q9ULS6 477 aa18.78■□□□□ 0.6
SPHK1-210ENST00000592299 TEX13DA0A0J9YY54 714 aaPredicted RBP18.77■□□□□ 0.6
SPHK1-210ENST00000592299 PHF1O43189 567 aaPredicted RBP18.77■□□□□ 0.6
SPHK1-210ENST00000592299 IGHV3-7P01780 117 aa18.77■□□□□ 0.6
SPHK1-210ENST00000592299 PRAMEF5Q5TYX0 476 aa18.77■□□□□ 0.6
SPHK1-210ENST00000592299 HIST2H2BCQ6DN03 193 aa18.77■□□□□ 0.6
SPHK1-210ENST00000592299 RTN4IP1Q8WWV3 396 aaPredicted RBP18.77■□□□□ 0.6
SPHK1-210ENST00000592299 FAM168AQ92567 244 aa18.77■□□□□ 0.6
SPHK1-210ENST00000592299 ZNF486Q96H40 463 aaPredicted RBP18.77■□□□□ 0.6
SPHK1-210ENST00000592299 GPR31O00270 319 aa18.77■□□□□ 0.59
SPHK1-210ENST00000592299 ERVFRD-1P60508 538 aa18.77■□□□□ 0.59
SPHK1-210ENST00000592299 DHODHQ02127 395 aa18.77■□□□□ 0.59
SPHK1-210ENST00000592299 FCN2Q15485 313 aa18.77■□□□□ 0.59
SPHK1-210ENST00000592299 MORN2Q502X0 79 aa18.77■□□□□ 0.59
SPHK1-210ENST00000592299 SGPP2Q8IWX5 399 aa18.77■□□□□ 0.59
SPHK1-210ENST00000592299 SSBP3Q9BWW4 388 aaPredicted RBP18.77■□□□□ 0.59
SPHK1-210ENST00000592299 TOLLIPQ9H0E2 274 aa18.77■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms