RNA–Protein interactions for RNA: ENST00000591548.5

TUBD1-211, Transcript of tubulin delta 1, humanhuman

TSL 1 (best)

Gene TUBD1, Length 1,577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-211ENST00000591548 ZNF841Q6ZN19 808 aa9.41□□□□□ -0.9
TUBD1-211ENST00000591548 SECTM1Q8WVN6 248 aa9.41□□□□□ -0.9
TUBD1-211ENST00000591548 RAB1CQ92928 201 aa9.41□□□□□ -0.9
TUBD1-211ENST00000591548 SLC5A7Q9GZV3 580 aa9.41□□□□□ -0.9
TUBD1-211ENST00000591548 TOLLIPQ9H0E2 274 aa9.41□□□□□ -0.9
TUBD1-211ENST00000591548 RANGRFQ9HD47 186 aaPredicted RBP9.41□□□□□ -0.9
TUBD1-211ENST00000591548 CALYQ9NYX4 217 aa9.41□□□□□ -0.9
TUBD1-211ENST00000591548 USF3Q68DE3 2245 aa9.41□□□□□ -0.9
TUBD1-211ENST00000591548 USP9YO00507 2555 aaPredicted RBP9.41□□□□□ -0.9
TUBD1-211ENST00000591548 TRGV10A0A0A0MS01 117 aa9.41□□□□□ -0.9
TUBD1-211ENST00000591548 IGHV3-43A0A0B4J1X8 118 aa9.41□□□□□ -0.9
TUBD1-211ENST00000591548 KBTBD11-OT1A0A1B0GTJ5 212 aa9.41□□□□□ -0.9
TUBD1-211ENST00000591548 BOLA2-SMG1P6H3BVE0 249 aa9.41□□□□□ -0.9
TUBD1-211ENST00000591548 F2RL2O00254 374 aa9.41□□□□□ -0.9
TUBD1-211ENST00000591548 IGHV3-43DP0DP04 118 aa9.41□□□□□ -0.9
TUBD1-211ENST00000591548 OMGP23515 440 aa9.41□□□□□ -0.9
TUBD1-211ENST00000591548 COL8A1P27658 744 aa9.41□□□□□ -0.9
TUBD1-211ENST00000591548 PPP1CCP36873 323 aaKnown RBP9.41□□□□□ -0.9
TUBD1-211ENST00000591548 PIGPP57054 158 aa9.41□□□□□ -0.9
TUBD1-211ENST00000591548 LOXL3P58215 753 aa9.41□□□□□ -0.9
TUBD1-211ENST00000591548 RPL31P62899 125 aaKnown RBP9.41□□□□□ -0.9
TUBD1-211ENST00000591548 CD83Q01151 205 aa9.41□□□□□ -0.9
TUBD1-211ENST00000591548 MEF2CQ06413 473 aaPredicted RBP9.41□□□□□ -0.9
TUBD1-211ENST00000591548 PHLDA2Q53GA4 152 aa9.41□□□□□ -0.9
TUBD1-211ENST00000591548 LPCAT3Q6P1A2 487 aa9.41□□□□□ -0.9
TUBD1-211ENST00000591548 ZNF818PQ6ZRF7 136 aa9.41□□□□□ -0.9
TUBD1-211ENST00000591548 C12orf45Q8N5I9 185 aaPredicted RBP9.41□□□□□ -0.9
TUBD1-211ENST00000591548 MITD1Q8WV92 249 aa9.41□□□□□ -0.9
TUBD1-211ENST00000591548 PPP1R14BQ96C90 147 aa9.41□□□□□ -0.9
TUBD1-211ENST00000591548 TIMD4Q96H15 378 aa9.41□□□□□ -0.9
TUBD1-211ENST00000591548 FYTTD1Q96QD9 318 aaKnown RBP9.41□□□□□ -0.9
TUBD1-211ENST00000591548 LINC00574Q9H8X3 128 aa9.41□□□□□ -0.9
TUBD1-211ENST00000591548 OR2S2Q9NQN1 319 aa9.41□□□□□ -0.9
TUBD1-211ENST00000591548 CCL28Q9NRJ3 127 aa9.41□□□□□ -0.9
TUBD1-211ENST00000591548 SLC2A9Q9NRM0 540 aa9.41□□□□□ -0.9
TUBD1-211ENST00000591548 CLN8Q9UBY8 286 aa9.41□□□□□ -0.9
TUBD1-211ENST00000591548 DSCAML1Q8TD84 2053 aa9.41□□□□□ -0.9
TUBD1-211ENST00000591548 hADV38S2A0JD32 116 aa9.4□□□□□ -0.9
TUBD1-211ENST00000591548 CRYM-AS1A6NIL9 109 aa9.4□□□□□ -0.9
TUBD1-211ENST00000591548 SFT2D2O95562 160 aa9.4□□□□□ -0.9
TUBD1-211ENST00000591548 DUS4LO95620 317 aaKnown RBP9.4□□□□□ -0.9
TUBD1-211ENST00000591548 IGLV2-14P01704 120 aa9.4□□□□□ -0.9
TUBD1-211ENST00000591548 IGHV4-39P01824 125 aa9.4□□□□□ -0.9
TUBD1-211ENST00000591548 OR8U9P0C7N5 309 aa9.4□□□□□ -0.9
TUBD1-211ENST00000591548 LUMP51884 338 aaPredicted RBP9.4□□□□□ -0.9
TUBD1-211ENST00000591548 ZNF273Q14593 569 aa9.4□□□□□ -0.9
TUBD1-211ENST00000591548 LTC4SQ16873 150 aa9.4□□□□□ -0.9
TUBD1-211ENST00000591548 ABCA11PQ4W5N1 156 aa9.4□□□□□ -0.9
TUBD1-211ENST00000591548 TMEM155Q4W5P6 130 aa9.4□□□□□ -0.9
TUBD1-211ENST00000591548 UTF1Q5T230 341 aa9.4□□□□□ -0.9
TUBD1-211ENST00000591548 TMEM200BQ69YZ2 307 aa9.4□□□□□ -0.9
TUBD1-211ENST00000591548 SPICQ8N5J4 248 aa9.4□□□□□ -0.9
TUBD1-211ENST00000591548 UXS1Q8NBZ7 420 aa9.4□□□□□ -0.9
TUBD1-211ENST00000591548 OR2AK2Q8NG84 335 aa9.4□□□□□ -0.9
TUBD1-211ENST00000591548 OR10V1Q8NGI7 309 aa9.4□□□□□ -0.9
TUBD1-211ENST00000591548 OR8U1Q8NH10 309 aa9.4□□□□□ -0.9
TUBD1-211ENST00000591548 CASTOR1Q8WTX7 329 aa9.4□□□□□ -0.9
TUBD1-211ENST00000591548 RTN4IP1Q8WWV3 396 aaPredicted RBP9.4□□□□□ -0.9
TUBD1-211ENST00000591548 H1FXQ92522 213 aaKnown RBP9.4□□□□□ -0.9
TUBD1-211ENST00000591548 ZNF486Q96H40 463 aaPredicted RBP9.4□□□□□ -0.9
TUBD1-211ENST00000591548 CCL19Q99731 98 aa9.4□□□□□ -0.9
TUBD1-211ENST00000591548 PRR13Q9NZ81 148 aa9.4□□□□□ -0.9
TUBD1-211ENST00000591548 UBE2J1Q9Y385 318 aaPredicted RBP9.4□□□□□ -0.9
TUBD1-211ENST00000591548 LINC00312Q9Y6C7 94 aa9.4□□□□□ -0.9
TUBD1-211ENST00000591548 FBN2P35556 2912 aa9.39□□□□□ -0.91
TUBD1-211ENST00000591548 ZNF729A6NN14 1252 aaPredicted RBP9.39□□□□□ -0.91
TUBD1-211ENST00000591548 GPR31O00270 319 aa9.39□□□□□ -0.91
TUBD1-211ENST00000591548 HSD17B6O14756 317 aa9.39□□□□□ -0.91
TUBD1-211ENST00000591548 GPR37O15354 613 aa9.39□□□□□ -0.91
TUBD1-211ENST00000591548 HNRNPCP07910 306 aaKnown RBP eCLIP9.39□□□□□ -0.91
TUBD1-211ENST00000591548 WNT2P09544 360 aa9.39□□□□□ -0.91
TUBD1-211ENST00000591548 SLC9A3R2Q15599 337 aa9.39□□□□□ -0.91
TUBD1-211ENST00000591548 ANKRD55Q3KP44 614 aa9.39□□□□□ -0.91
TUBD1-211ENST00000591548 DMRTA1Q5VZB9 504 aa9.39□□□□□ -0.91
TUBD1-211ENST00000591548 LIN54Q6MZP7 749 aa9.39□□□□□ -0.91
TUBD1-211ENST00000591548 SGPP2Q8IWX5 399 aa9.39□□□□□ -0.91
TUBD1-211ENST00000591548 ZNF525Q8N782 197 aa9.39□□□□□ -0.91
TUBD1-211ENST00000591548 NINJ1Q92982 152 aa9.39□□□□□ -0.91
TUBD1-211ENST00000591548 GPHA2Q96T91 129 aa9.39□□□□□ -0.91
TUBD1-211ENST00000591548 MGAT4CQ9UBM8 478 aa9.39□□□□□ -0.91
TUBD1-211ENST00000591548 JPT1Q9UK76 154 aa9.39□□□□□ -0.91
TUBD1-211ENST00000591548 AKAP6Q13023 2319 aa9.38□□□□□ -0.91
TUBD1-211ENST00000591548 TEX13DA0A0J9YY54 714 aaPredicted RBP9.38□□□□□ -0.91
TUBD1-211ENST00000591548 DBX1A6NMT0 343 aa9.38□□□□□ -0.91
TUBD1-211ENST00000591548 MPPED1O15442 326 aa9.38□□□□□ -0.91
TUBD1-211ENST00000591548 MMP23AO75900 390 aa9.38□□□□□ -0.91
TUBD1-211ENST00000591548 CCL3L1P16619 93 aa9.38□□□□□ -0.91
TUBD1-211ENST00000591548 CD34P28906 385 aa9.38□□□□□ -0.91
TUBD1-211ENST00000591548 GPR6P46095 362 aaPredicted RBP9.38□□□□□ -0.91
TUBD1-211ENST00000591548 ERVFRD-1P60508 538 aa9.38□□□□□ -0.91
TUBD1-211ENST00000591548 RND3P61587 244 aa9.38□□□□□ -0.91
TUBD1-211ENST00000591548 MORN2Q502X0 79 aa9.38□□□□□ -0.91
TUBD1-211ENST00000591548 BVESQ8NE79 360 aa9.38□□□□□ -0.91
TUBD1-211ENST00000591548 NRGNQ92686 78 aa9.38□□□□□ -0.91
TUBD1-211ENST00000591548 PHB2Q99623 299 aa9.38□□□□□ -0.91
TUBD1-211ENST00000591548 AGMATQ9BSE5 352 aa9.38□□□□□ -0.91
TUBD1-211ENST00000591548 NAA60Q9H7X0 242 aa9.38□□□□□ -0.91
TUBD1-211ENST00000591548 TAS2R3Q9NYW6 316 aa9.38□□□□□ -0.91
TUBD1-211ENST00000591548 GNG12Q9UBI6 72 aa9.38□□□□□ -0.91
TUBD1-211ENST00000591548 MIOXQ9UGB7 285 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms