RNA–Protein interactions for RNA: ENST00000589990.1

PRKCSH-210, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-210ENST00000589990 MRPL28Q13084 256 aaKnown RBP9.8□□□□□ -0.84
PRKCSH-210ENST00000589990 ALKBH1Q13686 389 aaKnown RBP9.8□□□□□ -0.84
PRKCSH-210ENST00000589990 PAN3Q58A45 887 aaKnown RBP9.8□□□□□ -0.84
PRKCSH-210ENST00000589990 RBM48Q5RL73 367 aaKnown RBP9.8□□□□□ -0.84
PRKCSH-210ENST00000589990 TMEM65Q6PI78 240 aa9.8□□□□□ -0.84
PRKCSH-210ENST00000589990 ZNF565Q8N9K5 539 aa9.8□□□□□ -0.84
PRKCSH-210ENST00000589990 OR10AC1Q8NH08 325 aa9.8□□□□□ -0.84
PRKCSH-210ENST00000589990 LINC00476Q8WZB0 136 aa9.8□□□□□ -0.84
PRKCSH-210ENST00000589990 RITA1Q96K30 269 aa9.8□□□□□ -0.84
PRKCSH-210ENST00000589990 OPALINQ96PE5 141 aa9.8□□□□□ -0.84
PRKCSH-210ENST00000589990 NR1H4Q96RI1 486 aaPredicted RBP9.8□□□□□ -0.84
PRKCSH-210ENST00000589990 TOLLIPQ9H0E2 274 aa9.8□□□□□ -0.84
PRKCSH-210ENST00000589990 OR51J1Q9H342 316 aa9.8□□□□□ -0.84
PRKCSH-210ENST00000589990 DUSP21Q9H596 190 aa9.8□□□□□ -0.84
PRKCSH-210ENST00000589990 FKBP14Q9NWM8 211 aa9.8□□□□□ -0.84
PRKCSH-210ENST00000589990 FRRS1LQ9P0K9 344 aa9.8□□□□□ -0.84
PRKCSH-210ENST00000589990 BLOC1S6Q9UL45 172 aa9.8□□□□□ -0.84
PRKCSH-210ENST00000589990 ERGIC3Q9Y282 383 aa9.8□□□□□ -0.84
PRKCSH-210ENST00000589990 IGHV3-43A0A0B4J1X8 118 aa9.79□□□□□ -0.84
PRKCSH-210ENST00000589990 FAM90A10PA6NDY2 464 aa9.79□□□□□ -0.84
PRKCSH-210ENST00000589990 E9PI62 339 aa9.79□□□□□ -0.84
PRKCSH-210ENST00000589990 IGHV3-43DP0DP04 118 aa9.79□□□□□ -0.84
PRKCSH-210ENST00000589990 CRHBPP24387 322 aa9.79□□□□□ -0.84
PRKCSH-210ENST00000589990 CD1BP29016 333 aa9.79□□□□□ -0.84
PRKCSH-210ENST00000589990 MTNR1BP49286 362 aa9.79□□□□□ -0.84
PRKCSH-210ENST00000589990 CCR9P51686 369 aa9.79□□□□□ -0.84
PRKCSH-210ENST00000589990 GTF2A1P52655 376 aaPredicted RBP9.79□□□□□ -0.84
PRKCSH-210ENST00000589990 TMEM244Q5VVB8 128 aa9.79□□□□□ -0.84
PRKCSH-210ENST00000589990 FDX2Q6P4F2 183 aa9.79□□□□□ -0.84
PRKCSH-210ENST00000589990 LYPD6Q86Y78 171 aa9.79□□□□□ -0.84
PRKCSH-210ENST00000589990 NANOGP1Q8N7R0 232 aa9.79□□□□□ -0.84
PRKCSH-210ENST00000589990 CHST4Q8NCG5 386 aa9.79□□□□□ -0.84
PRKCSH-210ENST00000589990 OR52N1Q8NH53 320 aa9.79□□□□□ -0.84
PRKCSH-210ENST00000589990 PP6455Q8WZ26 134 aa9.79□□□□□ -0.84
PRKCSH-210ENST00000589990 NEK6Q9HC98 313 aa9.79□□□□□ -0.84
PRKCSH-210ENST00000589990 PARP11Q9NR21 331 aa9.79□□□□□ -0.84
PRKCSH-210ENST00000589990 PAK1IP1Q9NWT1 392 aaPredicted RBP9.79□□□□□ -0.84
PRKCSH-210ENST00000589990 BABAM2Q9NXR7 383 aa9.79□□□□□ -0.84
PRKCSH-210ENST00000589990 ZNF580Q9UK33 172 aa9.79□□□□□ -0.84
PRKCSH-210ENST00000589990 FBXO7Q9Y3I1 522 aa9.79□□□□□ -0.84
PRKCSH-210ENST00000589990 HECTD4Q9Y4D8 3996 aa9.79□□□□□ -0.84
PRKCSH-210ENST00000589990 OR4C45A6NMZ5 311 aa9.78□□□□□ -0.84
PRKCSH-210ENST00000589990 IGLV1-51P01701 117 aa9.78□□□□□ -0.84
PRKCSH-210ENST00000589990 IGHV3-11P01762 117 aa9.78□□□□□ -0.84
PRKCSH-210ENST00000589990 MT-ND2P03891 347 aa9.78□□□□□ -0.84
PRKCSH-210ENST00000589990 OR8U9P0C7N5 309 aa9.78□□□□□ -0.84
PRKCSH-210ENST00000589990 UBCP0CG48 685 aaKnown RBP9.78□□□□□ -0.84
PRKCSH-210ENST00000589990 PRKACBP22694 351 aa9.78□□□□□ -0.84
PRKCSH-210ENST00000589990 NDPQ00604 133 aa9.78□□□□□ -0.84
PRKCSH-210ENST00000589990 RPL22L1Q6P5R6 122 aaKnown RBP9.78□□□□□ -0.84
PRKCSH-210ENST00000589990 UTS2BQ765I0 119 aa9.78□□□□□ -0.84
PRKCSH-210ENST00000589990 SGPP2Q8IWX5 399 aa9.78□□□□□ -0.84
PRKCSH-210ENST00000589990 OR51A4Q8NGJ6 313 aa9.78□□□□□ -0.84
PRKCSH-210ENST00000589990 OR13C9Q8NGT0 318 aa9.78□□□□□ -0.84
PRKCSH-210ENST00000589990 OR5AK2Q8NH90 309 aa9.78□□□□□ -0.84
PRKCSH-210ENST00000589990 NABP2Q9BQ15 211 aa9.78□□□□□ -0.84
PRKCSH-210ENST00000589990 MND1Q9BWT6 205 aa9.78□□□□□ -0.84
PRKCSH-210ENST00000589990 GHITMQ9H3K2 345 aa9.78□□□□□ -0.84
PRKCSH-210ENST00000589990 ZCCHC4Q9H5U6 513 aa9.78□□□□□ -0.84
PRKCSH-210ENST00000589990 LRRC42Q9Y546 428 aa9.78□□□□□ -0.84
PRKCSH-210ENST00000589990 IGHV7-81A0A0B4J1V7 117 aa9.77□□□□□ -0.85
PRKCSH-210ENST00000589990 TRAV41A0A0B4J266 112 aa9.77□□□□□ -0.85
PRKCSH-210ENST00000589990 C12orf77C9JDV5 145 aa9.77□□□□□ -0.85
PRKCSH-210ENST00000589990 C15orf65H3BRN8 121 aa9.77□□□□□ -0.85
PRKCSH-210ENST00000589990 HSPA12AO43301 675 aa9.77□□□□□ -0.85
PRKCSH-210ENST00000589990 LY6G6CO95867 125 aa9.77□□□□□ -0.85
PRKCSH-210ENST00000589990 IFNA6P05013 189 aa9.77□□□□□ -0.85
PRKCSH-210ENST00000589990 OR5H8P0DN80 308 aa9.77□□□□□ -0.85
PRKCSH-210ENST00000589990 BLVRBP30043 206 aaPredicted RBP9.77□□□□□ -0.85
PRKCSH-210ENST00000589990 WNT4P56705 351 aa9.77□□□□□ -0.85
PRKCSH-210ENST00000589990 PITPNAQ00169 270 aa9.77□□□□□ -0.85
PRKCSH-210ENST00000589990 MED22Q15528 200 aa9.77□□□□□ -0.85
PRKCSH-210ENST00000589990 CCDC58Q4VC31 144 aa9.77□□□□□ -0.85
PRKCSH-210ENST00000589990 RNLSQ5VYX0 342 aa9.77□□□□□ -0.85
PRKCSH-210ENST00000589990 XAF1Q6GPH4 301 aa9.77□□□□□ -0.85
PRKCSH-210ENST00000589990 ZFP41Q8N8Y5 198 aa9.77□□□□□ -0.85
PRKCSH-210ENST00000589990 CCDC54Q8NEL0 328 aa9.77□□□□□ -0.85
PRKCSH-210ENST00000589990 SPSB1Q96BD6 273 aa9.77□□□□□ -0.85
PRKCSH-210ENST00000589990 OR4C12Q96R67 309 aa9.77□□□□□ -0.85
PRKCSH-210ENST00000589990 PDCD1LG2Q9BQ51 273 aa9.77□□□□□ -0.85
PRKCSH-210ENST00000589990 RSRP1Q9BUV0 290 aa9.77□□□□□ -0.85
PRKCSH-210ENST00000589990 YTHDF1Q9BYJ9 559 aaKnown RBP9.77□□□□□ -0.85
PRKCSH-210ENST00000589990 HIPK2Q9H2X6 1198 aa9.77□□□□□ -0.85
PRKCSH-210ENST00000589990 PNMA8CA0A1B0GUJ8 204 aa9.76□□□□□ -0.85
PRKCSH-210ENST00000589990 TMEM212A6NML5 194 aa9.76□□□□□ -0.85
PRKCSH-210ENST00000589990 OGG1O15527 345 aa9.76□□□□□ -0.85
PRKCSH-210ENST00000589990 BRI3O95415 125 aa9.76□□□□□ -0.85
PRKCSH-210ENST00000589990 LALBAP00709 142 aa9.76□□□□□ -0.85
PRKCSH-210ENST00000589990 ISG15P05161 165 aa9.76□□□□□ -0.85
PRKCSH-210ENST00000589990 RPSAP08865 295 aaKnown RBP9.76□□□□□ -0.85
PRKCSH-210ENST00000589990 LGALS1P09382 135 aaKnown RBP9.76□□□□□ -0.85
PRKCSH-210ENST00000589990 ZNF20P17024 532 aa9.76□□□□□ -0.85
PRKCSH-210ENST00000589990 ZNF134P52741 427 aa9.76□□□□□ -0.85
PRKCSH-210ENST00000589990 MMDQ15546 238 aa9.76□□□□□ -0.85
PRKCSH-210ENST00000589990 ECSCRQ19T08 205 aa9.76□□□□□ -0.85
PRKCSH-210ENST00000589990 PIGYQ3MUY2 71 aa9.76□□□□□ -0.85
PRKCSH-210ENST00000589990 C19orf54Q5BKX5 351 aa9.76□□□□□ -0.85
PRKCSH-210ENST00000589990 SLC16A12Q6ZSM3 486 aa9.76□□□□□ -0.85
PRKCSH-210ENST00000589990 PRSS48Q7RTY5 328 aa9.76□□□□□ -0.85
PRKCSH-210ENST00000589990 RPP25LQ8N5L8 163 aaKnown RBP9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms