RNA–Protein interactions for RNA: ENST00000589940.5

CXXC1-212, Transcript of CXXC finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene CXXC1, Length 2,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-212ENST00000589940 AKR1C4P17516 323 aa14.41□□□□□ -0.1
CXXC1-212ENST00000589940 UBE2MP61081 183 aaKnown RBP14.41□□□□□ -0.1
CXXC1-212ENST00000589940 LINC00574Q9H8X3 128 aa14.41□□□□□ -0.1
CXXC1-212ENST00000589940 BARX1Q9HBU1 254 aaPredicted RBP14.41□□□□□ -0.1
CXXC1-212ENST00000589940 TAS2R3Q9NYW6 316 aa14.41□□□□□ -0.1
CXXC1-212ENST00000589940 TRBV23-1A0A0A0MS06 115 aa14.41□□□□□ -0.1
CXXC1-212ENST00000589940 IGKV1D-13A0A0B4J2D9 117 aa14.41□□□□□ -0.1
CXXC1-212ENST00000589940 SNRPGP15A8MWD9 76 aa14.41□□□□□ -0.1
CXXC1-212ENST00000589940 PFDN1O60925 122 aa14.41□□□□□ -0.1
CXXC1-212ENST00000589940 IGKV1-13P0DP09 117 aa14.41□□□□□ -0.1
CXXC1-212ENST00000589940 LPCAT3Q6P1A2 487 aa14.41□□□□□ -0.1
CXXC1-212ENST00000589940 CHAC2Q8WUX2 184 aa14.41□□□□□ -0.1
CXXC1-212ENST00000589940 RSRP1Q9BUV0 290 aa14.41□□□□□ -0.1
CXXC1-212ENST00000589940 PATZ1Q9HBE1 687 aaKnown RBP14.41□□□□□ -0.1
CXXC1-212ENST00000589940 CREBL2O60519 120 aaPredicted RBP14.4□□□□□ -0.1
CXXC1-212ENST00000589940 PDLIM4P50479 330 aa14.4□□□□□ -0.1
CXXC1-212ENST00000589940 ATP5J2P56134 94 aa14.4□□□□□ -0.1
CXXC1-212ENST00000589940 ZNF273Q14593 569 aa14.4□□□□□ -0.1
CXXC1-212ENST00000589940 GNMTQ14749 295 aa14.4□□□□□ -0.1
CXXC1-212ENST00000589940 TMEM128Q5BJH2 165 aa14.4□□□□□ -0.1
CXXC1-212ENST00000589940 ZNF626Q68DY1 528 aa14.4□□□□□ -0.1
CXXC1-212ENST00000589940 TMEM200BQ69YZ2 307 aa14.4□□□□□ -0.1
CXXC1-212ENST00000589940 OR52B4Q8NGK2 314 aa14.4□□□□□ -0.1
CXXC1-212ENST00000589940 SECTM1Q8WVN6 248 aa14.4□□□□□ -0.1
CXXC1-212ENST00000589940 TMEM230Q96A57 120 aa14.4□□□□□ -0.1
CXXC1-212ENST00000589940 GAL3ST2Q9H3Q3 398 aa14.4□□□□□ -0.1
CXXC1-212ENST00000589940 JPT1Q9UK76 154 aa14.4□□□□□ -0.1
CXXC1-212ENST00000589940 ASH1LQ9NR48 2969 aaKnown RBP14.4□□□□□ -0.1
CXXC1-212ENST00000589940 PAX1P15863 534 aa14.39□□□□□ -0.11
CXXC1-212ENST00000589940 PPP1CCP36873 323 aaKnown RBP14.39□□□□□ -0.11
CXXC1-212ENST00000589940 DHRS2Q13268 280 aa14.39□□□□□ -0.11
CXXC1-212ENST00000589940 PPP1R1AQ13522 171 aa14.39□□□□□ -0.11
CXXC1-212ENST00000589940 WDR25Q64LD2 544 aaPredicted RBP14.39□□□□□ -0.11
CXXC1-212ENST00000589940 FAM185AQ8N0U4 392 aa14.39□□□□□ -0.11
CXXC1-212ENST00000589940 OR10V1Q8NGI7 309 aa14.39□□□□□ -0.11
CXXC1-212ENST00000589940 MARVELD3Q96A59 401 aa14.39□□□□□ -0.11
CXXC1-212ENST00000589940 ZNF486Q96H40 463 aaPredicted RBP14.39□□□□□ -0.11
CXXC1-212ENST00000589940 ZNF714Q96N38 554 aa14.39□□□□□ -0.11
CXXC1-212ENST00000589940 SLC5A7Q9GZV3 580 aa14.39□□□□□ -0.11
CXXC1-212ENST00000589940 PARP12Q9H0J9 701 aaKnown RBP14.39□□□□□ -0.11
CXXC1-212ENST00000589940 NARFLQ9H6Q4 476 aa14.39□□□□□ -0.11
CXXC1-212ENST00000589940 IGHV3-43A0A0B4J1X8 118 aa14.39□□□□□ -0.11
CXXC1-212ENST00000589940 F5H0A9 414 aaPredicted RBP14.39□□□□□ -0.11
CXXC1-212ENST00000589940 HLA-AP01891 365 aaKnown RBP14.39□□□□□ -0.11
CXXC1-212ENST00000589940 IGHV3-43DP0DP04 118 aa14.39□□□□□ -0.11
CXXC1-212ENST00000589940 OMGP23515 440 aa14.39□□□□□ -0.11
CXXC1-212ENST00000589940 GNRHRP30968 328 aa14.39□□□□□ -0.11
CXXC1-212ENST00000589940 LUMP51884 338 aaPredicted RBP14.39□□□□□ -0.11
CXXC1-212ENST00000589940 LOXL3P58215 753 aa14.39□□□□□ -0.11
CXXC1-212ENST00000589940 RRAS2P62070 204 aaPredicted RBP14.39□□□□□ -0.11
CXXC1-212ENST00000589940 DHODHQ02127 395 aa14.39□□□□□ -0.11
CXXC1-212ENST00000589940 LTC4SQ16873 150 aa14.39□□□□□ -0.11
CXXC1-212ENST00000589940 ABCA11PQ4W5N1 156 aa14.39□□□□□ -0.11
CXXC1-212ENST00000589940 LDLRAD3Q86YD5 345 aa14.39□□□□□ -0.11
CXXC1-212ENST00000589940 ZNF431Q8TF32 576 aaPredicted RBP14.39□□□□□ -0.11
CXXC1-212ENST00000589940 GNG12Q9UBI6 72 aa14.39□□□□□ -0.11
CXXC1-212ENST00000589940 HMX3A6NHT5 357 aa14.38□□□□□ -0.11
CXXC1-212ENST00000589940 SSNA1O43805 119 aa14.38□□□□□ -0.11
CXXC1-212ENST00000589940 TRAPPC2P0DI81 140 aa14.38□□□□□ -0.11
CXXC1-212ENST00000589940 TRAPPC2BP0DI82 140 aa14.38□□□□□ -0.11
CXXC1-212ENST00000589940 PIGPP57054 158 aa14.38□□□□□ -0.11
CXXC1-212ENST00000589940 TMEM30BQ3MIR4 351 aa14.38□□□□□ -0.11
CXXC1-212ENST00000589940 FAM53AQ6NSI3 398 aaPredicted RBP14.38□□□□□ -0.11
CXXC1-212ENST00000589940 LYG2Q86SG7 212 aa14.38□□□□□ -0.11
CXXC1-212ENST00000589940 BPESC1Q9GZL8 116 aa14.38□□□□□ -0.11
CXXC1-212ENST00000589940 MED28Q9H204 178 aa14.38□□□□□ -0.11
CXXC1-212ENST00000589940 SLC2A9Q9NRM0 540 aa14.38□□□□□ -0.11
CXXC1-212ENST00000589940 IDI2-AS1Q9NZ38 188 aa14.38□□□□□ -0.11
CXXC1-212ENST00000589940 MALRD1Q5VYJ5 2156 aa14.38□□□□□ -0.11
CXXC1-212ENST00000589940 ABCA12Q86UK0 2595 aa14.38□□□□□ -0.11
CXXC1-212ENST00000589940 ARID1AO14497 2285 aa14.37□□□□□ -0.11
CXXC1-212ENST00000589940 C9orf170A2RU37 121 aa14.37□□□□□ -0.11
CXXC1-212ENST00000589940 YPEL1O60688 119 aa14.37□□□□□ -0.11
CXXC1-212ENST00000589940 VAMP1P23763 118 aa14.37□□□□□ -0.11
CXXC1-212ENST00000589940 KRTAP10-9P60411 292 aa14.37□□□□□ -0.11
CXXC1-212ENST00000589940 PHLDA2Q53GA4 152 aa14.37□□□□□ -0.11
CXXC1-212ENST00000589940 CD276Q5ZPR3 534 aa14.37□□□□□ -0.11
CXXC1-212ENST00000589940 ZNF818PQ6ZRF7 136 aa14.37□□□□□ -0.11
CXXC1-212ENST00000589940 PERPQ96FX8 193 aa14.37□□□□□ -0.11
CXXC1-212ENST00000589940 YPEL2Q96QA6 119 aa14.37□□□□□ -0.11
CXXC1-212ENST00000589940 GSX2Q9BZM3 304 aa14.37□□□□□ -0.11
CXXC1-212ENST00000589940 GFOD1Q9NXC2 390 aa14.37□□□□□ -0.11
CXXC1-212ENST00000589940 RBM7Q9Y580 266 aaKnown RBP14.37□□□□□ -0.11
CXXC1-212ENST00000589940 GPR31O00270 319 aa14.37□□□□□ -0.11
CXXC1-212ENST00000589940 OR8U9P0C7N5 309 aa14.37□□□□□ -0.11
CXXC1-212ENST00000589940 CCL3L1P16619 93 aa14.37□□□□□ -0.11
CXXC1-212ENST00000589940 GNB2P62879 340 aa14.37□□□□□ -0.11
CXXC1-212ENST00000589940 MORN2Q502X0 79 aa14.37□□□□□ -0.11
CXXC1-212ENST00000589940 OR10A7Q8NGE5 316 aa14.37□□□□□ -0.11
CXXC1-212ENST00000589940 OR52M1Q8NGK5 317 aa14.37□□□□□ -0.11
CXXC1-212ENST00000589940 OR8U1Q8NH10 309 aa14.37□□□□□ -0.11
CXXC1-212ENST00000589940 EDARADDQ8WWZ3 215 aa14.37□□□□□ -0.11
CXXC1-212ENST00000589940 FAM168AQ92567 244 aa14.37□□□□□ -0.11
CXXC1-212ENST00000589940 NEURL2Q9BR09 285 aa14.37□□□□□ -0.11
CXXC1-212ENST00000589940 CCL28Q9NRJ3 127 aa14.37□□□□□ -0.11
CXXC1-212ENST00000589940 NBPF19A0A087WUL8 3843 aa14.36□□□□□ -0.11
CXXC1-212ENST00000589940 CRYM-AS1A6NIL9 109 aa14.36□□□□□ -0.11
CXXC1-212ENST00000589940 NDUFS8O00217 210 aa14.36□□□□□ -0.11
CXXC1-212ENST00000589940 RGS11O94810 467 aa14.36□□□□□ -0.11
CXXC1-212ENST00000589940 SUPT4H1P63272 117 aaKnown RBP14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms