RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 TOR1AO14656 332 aa11.12□□□□□ -0.63
VMP1-210ENST00000589823 BET1O15155 118 aa11.12□□□□□ -0.63
VMP1-210ENST00000589823 IGHV1-69P01742 117 aa11.12□□□□□ -0.63
VMP1-210ENST00000589823 FCER2P06734 321 aa11.12□□□□□ -0.63
VMP1-210ENST00000589823 CTXN2P0C2S0 81 aa11.12□□□□□ -0.63
VMP1-210ENST00000589823 IGHV4-38-2P0DP08 117 aa11.12□□□□□ -0.63
VMP1-210ENST00000589823 ZBTB25P24278 435 aa11.12□□□□□ -0.63
VMP1-210ENST00000589823 CD34P28906 385 aa11.12□□□□□ -0.63
VMP1-210ENST00000589823 PRRX1P54821 245 aa11.12□□□□□ -0.63
VMP1-210ENST00000589823 LOXL3P58215 753 aa11.12□□□□□ -0.63
VMP1-210ENST00000589823 BPIFB3P59826 476 aa11.12□□□□□ -0.63
VMP1-210ENST00000589823 ACTBP60709 375 aa11.12□□□□□ -0.63
VMP1-210ENST00000589823 ACTG1P63261 375 aa11.12□□□□□ -0.63
VMP1-210ENST00000589823 DGCR2P98153 550 aa11.12□□□□□ -0.63
VMP1-210ENST00000589823 CHRFAM7AQ494W8 412 aa11.12□□□□□ -0.63
VMP1-210ENST00000589823 KLF17Q5JT82 389 aaPredicted RBP11.12□□□□□ -0.63
VMP1-210ENST00000589823 HCP5Q6MZN7 132 aa11.12□□□□□ -0.63
VMP1-210ENST00000589823 OR52L2PQ8NGH6 319 aa11.12□□□□□ -0.63
VMP1-210ENST00000589823 OR10V1Q8NGI7 309 aa11.12□□□□□ -0.63
VMP1-210ENST00000589823 OR9G1Q8NH87 305 aa11.12□□□□□ -0.63
VMP1-210ENST00000589823 SMIM4Q8WVI0 70 aa11.12□□□□□ -0.63
VMP1-210ENST00000589823 LEAP2Q969E1 77 aa11.12□□□□□ -0.63
VMP1-210ENST00000589823 CABLES2Q9BTV7 478 aa11.12□□□□□ -0.63
VMP1-210ENST00000589823 BEX2Q9BXY8 128 aa11.12□□□□□ -0.63
VMP1-210ENST00000589823 NUP50Q9UKX7 468 aa11.12□□□□□ -0.63
VMP1-210ENST00000589823 ANAPC10Q9UM13 185 aa11.12□□□□□ -0.63
VMP1-210ENST00000589823 V9GYH0 126 aa11.12□□□□□ -0.63
VMP1-210ENST00000589823 IGKV1D-8A0A087WSZ0 117 aa11.11□□□□□ -0.63
VMP1-210ENST00000589823 A0A1W2PRD5 423 aa11.11□□□□□ -0.63
VMP1-210ENST00000589823 A0A1W2PRF3 423 aa11.11□□□□□ -0.63
VMP1-210ENST00000589823 A0A1W2PRM7 423 aa11.11□□□□□ -0.63
VMP1-210ENST00000589823 INAFM1C9JVW0 142 aa11.11□□□□□ -0.63
VMP1-210ENST00000589823 GSTZ1O43708 216 aaPredicted RBP11.11□□□□□ -0.63
VMP1-210ENST00000589823 YPEL1O60688 119 aa11.11□□□□□ -0.63
VMP1-210ENST00000589823 DIRAS3O95661 229 aa11.11□□□□□ -0.63
VMP1-210ENST00000589823 FSHBP01225 129 aa11.11□□□□□ -0.63
VMP1-210ENST00000589823 IGHV3-7P01780 117 aa11.11□□□□□ -0.63
VMP1-210ENST00000589823 ARG1P05089 322 aa11.11□□□□□ -0.63
VMP1-210ENST00000589823 NAT1P18440 290 aa11.11□□□□□ -0.63
VMP1-210ENST00000589823 PPP1CCP36873 323 aaKnown RBP11.11□□□□□ -0.63
VMP1-210ENST00000589823 GNG10P50151 68 aa11.11□□□□□ -0.63
VMP1-210ENST00000589823 LGALS4P56470 323 aa11.11□□□□□ -0.63
VMP1-210ENST00000589823 ZNF45Q02386 682 aa11.11□□□□□ -0.63
VMP1-210ENST00000589823 GNMTQ14749 295 aa11.11□□□□□ -0.63
VMP1-210ENST00000589823 Q3ZCU0 254 aa11.11□□□□□ -0.63
VMP1-210ENST00000589823 IGSF11Q5DX21 431 aa11.11□□□□□ -0.63
VMP1-210ENST00000589823 OR11H6Q8NGC7 330 aa11.11□□□□□ -0.63
VMP1-210ENST00000589823 OR10J5Q8NHC4 309 aa11.11□□□□□ -0.63
VMP1-210ENST00000589823 ZNF596Q8TC21 504 aa11.11□□□□□ -0.63
VMP1-210ENST00000589823 YPEL2Q96QA6 119 aa11.11□□□□□ -0.63
VMP1-210ENST00000589823 GINS4Q9BRT9 223 aa11.11□□□□□ -0.63
VMP1-210ENST00000589823 MS4A7Q9GZW8 240 aaPredicted RBP11.11□□□□□ -0.63
VMP1-210ENST00000589823 KLK11Q9UBX7 282 aa11.11□□□□□ -0.63
VMP1-210ENST00000589823 MTFP1Q9UDX5 166 aa11.11□□□□□ -0.63
VMP1-210ENST00000589823 PSG11Q9UQ72 335 aa11.11□□□□□ -0.63
VMP1-210ENST00000589823 SVEP1Q4LDE5 3571 aa11.1□□□□□ -0.63
VMP1-210ENST00000589823 IGKV1-6A0A0C4DH72 117 aa11.1□□□□□ -0.63
VMP1-210ENST00000589823 NPFFO15130 113 aa11.1□□□□□ -0.63
VMP1-210ENST00000589823 CEACAM6P40199 344 aa11.1□□□□□ -0.63
VMP1-210ENST00000589823 OR3A3P47888 321 aa11.1□□□□□ -0.63
VMP1-210ENST00000589823 TAS2R46P59540 309 aa11.1□□□□□ -0.63
VMP1-210ENST00000589823 SSBP1Q04837 148 aaKnown RBP11.1□□□□□ -0.63
VMP1-210ENST00000589823 SCGB2A2Q13296 93 aa11.1□□□□□ -0.63
VMP1-210ENST00000589823 HERPUD1Q15011 391 aa11.1□□□□□ -0.63
VMP1-210ENST00000589823 MORN2Q502X0 79 aa11.1□□□□□ -0.63
VMP1-210ENST00000589823 MIDNQ504T8 468 aa11.1□□□□□ -0.63
VMP1-210ENST00000589823 ZNF626Q68DY1 528 aa11.1□□□□□ -0.63
VMP1-210ENST00000589823 BRD3OSQ6XYD6 125 aa11.1□□□□□ -0.63
VMP1-210ENST00000589823 OR5AP2Q8NGF4 316 aa11.1□□□□□ -0.63
VMP1-210ENST00000589823 OR5H2Q8NGV7 314 aa11.1□□□□□ -0.63
VMP1-210ENST00000589823 S100ZQ8WXG8 99 aa11.1□□□□□ -0.63
VMP1-210ENST00000589823 SNAPC3Q92966 411 aa11.1□□□□□ -0.63
VMP1-210ENST00000589823 NECAP2Q9NVZ3 263 aa11.1□□□□□ -0.63
VMP1-210ENST00000589823 OR1A1Q9P1Q5 309 aa11.1□□□□□ -0.63
VMP1-210ENST00000589823 ZNF69Q9UC07 566 aa11.1□□□□□ -0.63
VMP1-210ENST00000589823 AMMECR1Q9Y4X0 333 aaPredicted RBP11.1□□□□□ -0.63
VMP1-210ENST00000589823 TLN2Q9Y4G6 2542 aa11.1□□□□□ -0.63
VMP1-210ENST00000589823 HIVEP2P31629 2446 aa11.09□□□□□ -0.63
VMP1-210ENST00000589823 TRBV6-7A0A0A0MS04 114 aa11.09□□□□□ -0.63
VMP1-210ENST00000589823 ODF3BA8MYP8 253 aa11.09□□□□□ -0.63
VMP1-210ENST00000589823 J3QR06 171 aa11.09□□□□□ -0.63
VMP1-210ENST00000589823 SRD5A1P18405 259 aa11.09□□□□□ -0.63
VMP1-210ENST00000589823 HLA-DMAP28067 261 aa11.09□□□□□ -0.63
VMP1-210ENST00000589823 CDK10Q15131 360 aa11.09□□□□□ -0.63
VMP1-210ENST00000589823 ZNF79Q15937 498 aa11.09□□□□□ -0.63
VMP1-210ENST00000589823 HLA-DRB5Q30154 266 aa11.09□□□□□ -0.63
VMP1-210ENST00000589823 ACTBL2Q562R1 376 aa11.09□□□□□ -0.63
VMP1-210ENST00000589823 LY6G6FQ5SQ64 297 aa11.09□□□□□ -0.63
VMP1-210ENST00000589823 RUSC1-AS1Q66K80 236 aa11.09□□□□□ -0.63
VMP1-210ENST00000589823 FAM53AQ6NSI3 398 aaPredicted RBP11.09□□□□□ -0.63
VMP1-210ENST00000589823 Q8N402 240 aa11.09□□□□□ -0.63
VMP1-210ENST00000589823 GDPD1Q8N9F7 314 aa11.09□□□□□ -0.63
VMP1-210ENST00000589823 C8orf31Q8N9H6 132 aa11.09□□□□□ -0.63
VMP1-210ENST00000589823 BEND2Q8NDZ0 799 aa11.09□□□□□ -0.63
VMP1-210ENST00000589823 OR2AK2Q8NG84 335 aa11.09□□□□□ -0.63
VMP1-210ENST00000589823 OR10X1Q8NGY0 326 aa11.09□□□□□ -0.63
VMP1-210ENST00000589823 EDARADDQ8WWZ3 215 aa11.09□□□□□ -0.63
VMP1-210ENST00000589823 CREB3L1Q96BA8 519 aa11.09□□□□□ -0.63
VMP1-210ENST00000589823 MMP28Q9H239 520 aa11.09□□□□□ -0.63
VMP1-210ENST00000589823 RDH8Q9NYR8 311 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms