RNA–Protein interactions for RNA: ENST00000589797.5

RETREG3-208, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 4,149 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-208ENST00000589797 CLN8Q9UBY8 286 aa12.47□□□□□ -0.41
RETREG3-208ENST00000589797 PRR33A8MZF0 331 aa12.47□□□□□ -0.41
RETREG3-208ENST00000589797 ZP3P21754 424 aa12.47□□□□□ -0.41
RETREG3-208ENST00000589797 FGF7P21781 194 aa12.47□□□□□ -0.41
RETREG3-208ENST00000589797 IGHV1-2P23083 117 aa12.47□□□□□ -0.41
RETREG3-208ENST00000589797 PRDX2P32119 198 aa12.47□□□□□ -0.41
RETREG3-208ENST00000589797 TAS2R30P59541 319 aa12.47□□□□□ -0.41
RETREG3-208ENST00000589797 RPP30P78346 268 aaKnown RBP12.47□□□□□ -0.41
RETREG3-208ENST00000589797 S100PBPQ96BU1 408 aa12.47□□□□□ -0.41
RETREG3-208ENST00000589797 MARS2Q96GW9 593 aaKnown RBP12.47□□□□□ -0.41
RETREG3-208ENST00000589797 TRAV14DV4A0A0A6YYC5 116 aa12.46□□□□□ -0.41
RETREG3-208ENST00000589797 ANOS1P23352 680 aa12.46□□□□□ -0.41
RETREG3-208ENST00000589797 F2RP25116 425 aa12.46□□□□□ -0.41
RETREG3-208ENST00000589797 SSTR5P35346 364 aa12.46□□□□□ -0.41
RETREG3-208ENST00000589797 GUCA2BQ16661 112 aa12.46□□□□□ -0.41
RETREG3-208ENST00000589797 UBAC2Q8NBM4 344 aa12.46□□□□□ -0.41
RETREG3-208ENST00000589797 ASB13Q8WXK3 278 aa12.46□□□□□ -0.41
RETREG3-208ENST00000589797 GLRX2Q9NS18 164 aa12.46□□□□□ -0.41
RETREG3-208ENST00000589797 UQCC1Q9NVA1 299 aa12.46□□□□□ -0.41
RETREG3-208ENST00000589797 LPAR3Q9UBY5 353 aa12.46□□□□□ -0.41
RETREG3-208ENST00000589797 TMEM218A2RU14 115 aa12.46□□□□□ -0.41
RETREG3-208ENST00000589797 TRIM77I1YAP6 450 aa12.46□□□□□ -0.41
RETREG3-208ENST00000589797 GALR2O43603 387 aaPredicted RBP12.46□□□□□ -0.41
RETREG3-208ENST00000589797 CNIH1O95406 144 aa12.46□□□□□ -0.41
RETREG3-208ENST00000589797 MPV17P39210 176 aa12.46□□□□□ -0.41
RETREG3-208ENST00000589797 HBZP02008 142 aa12.46□□□□□ -0.42
RETREG3-208ENST00000589797 FAM87AP0C7U9 286 aa12.46□□□□□ -0.42
RETREG3-208ENST00000589797 COX7A1P24310 79 aa12.46□□□□□ -0.42
RETREG3-208ENST00000589797 STUMQ69YW2 141 aa12.46□□□□□ -0.42
RETREG3-208ENST00000589797 TVP23CQ96ET8 276 aa12.46□□□□□ -0.42
RETREG3-208ENST00000589797 ACY3Q96HD9 319 aa12.46□□□□□ -0.42
RETREG3-208ENST00000589797 COMMD5Q9GZQ3 224 aa12.46□□□□□ -0.42
RETREG3-208ENST00000589797 CLDN14O95500 239 aa12.45□□□□□ -0.42
RETREG3-208ENST00000589797 CECR9P0C854 216 aa12.45□□□□□ -0.42
RETREG3-208ENST00000589797 SLC38A11Q08AI6 406 aa12.45□□□□□ -0.42
RETREG3-208ENST00000589797 FAM166AQ6J272 317 aa12.45□□□□□ -0.42
RETREG3-208ENST00000589797 FAM24BQ8N5W8 94 aa12.45□□□□□ -0.42
RETREG3-208ENST00000589797 RSG1Q9BU20 258 aa12.45□□□□□ -0.42
RETREG3-208ENST00000589797 ADAMTS9Q9P2N4 1935 aa12.45□□□□□ -0.42
RETREG3-208ENST00000589797 KPTNQ9Y664 436 aa12.45□□□□□ -0.42
RETREG3-208ENST00000589797 OR2C1O95371 312 aa12.45□□□□□ -0.42
RETREG3-208ENST00000589797 SLC25A6P12236 298 aa12.45□□□□□ -0.42
RETREG3-208ENST00000589797 ATP6V0CP27449 155 aa12.45□□□□□ -0.42
RETREG3-208ENST00000589797 GFRA1P56159 465 aa12.45□□□□□ -0.42
RETREG3-208ENST00000589797 NHLRC3Q5JS37 347 aa12.45□□□□□ -0.42
RETREG3-208ENST00000589797 AVPI1Q5T686 147 aa12.45□□□□□ -0.42
RETREG3-208ENST00000589797 RBMS3Q6XE24 437 aaKnown RBP12.45□□□□□ -0.42
RETREG3-208ENST00000589797 CA5BP1Q8WTZ4 195 aa12.45□□□□□ -0.42
RETREG3-208ENST00000589797 POM121L2Q96KW2 1035 aa12.45□□□□□ -0.42
RETREG3-208ENST00000589797 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.45□□□□□ -0.42
RETREG3-208ENST00000589797 ZNF355PQ9NSJ1 428 aa12.45□□□□□ -0.42
RETREG3-208ENST00000589797 LAMA1P25391 3075 aa12.45□□□□□ -0.42
RETREG3-208ENST00000589797 SLC25A4P12235 298 aa12.45□□□□□ -0.42
RETREG3-208ENST00000589797 B3GALT5-AS1P59052 145 aa12.45□□□□□ -0.42
RETREG3-208ENST00000589797 VKORC1L1Q8N0U8 176 aa12.45□□□□□ -0.42
RETREG3-208ENST00000589797 HS3ST6Q96QI5 342 aa12.45□□□□□ -0.42
RETREG3-208ENST00000589797 SH3BGRL3Q9H299 93 aa12.45□□□□□ -0.42
RETREG3-208ENST00000589797 CCDC168Q8NDH2 2452 aa12.45□□□□□ -0.42
RETREG3-208ENST00000589797 CRYM-AS1A6NIL9 109 aa12.44□□□□□ -0.42
RETREG3-208ENST00000589797 GYPAP02724 150 aa12.44□□□□□ -0.42
RETREG3-208ENST00000589797 TNFRSF1AP19438 455 aa12.44□□□□□ -0.42
RETREG3-208ENST00000589797 PSMB3P49720 205 aa12.44□□□□□ -0.42
RETREG3-208ENST00000589797 NDUFA6P56556 154 aa12.44□□□□□ -0.42
RETREG3-208ENST00000589797 ARSJQ5FYB0 599 aaPredicted RBP12.44□□□□□ -0.42
RETREG3-208ENST00000589797 ABLIM2Q6H8Q1 611 aa12.44□□□□□ -0.42
RETREG3-208ENST00000589797 TMEM65Q6PI78 240 aa12.44□□□□□ -0.42
RETREG3-208ENST00000589797 ABHD17AQ96GS6 310 aa12.44□□□□□ -0.42
RETREG3-208ENST00000589797 AURKAIP1Q9NWT8 199 aaPredicted RBP12.44□□□□□ -0.42
RETREG3-208ENST00000589797 C16orf97H3BN30 126 aa12.44□□□□□ -0.42
RETREG3-208ENST00000589797 IL13RA2Q14627 380 aa12.44□□□□□ -0.42
RETREG3-208ENST00000589797 TMEM252Q8N6L7 170 aa12.44□□□□□ -0.42
RETREG3-208ENST00000589797 OSGIN2Q9Y236 505 aa12.44□□□□□ -0.42
RETREG3-208ENST00000589797 LOC390937A0A1W2PQ73 354 aa12.44□□□□□ -0.42
RETREG3-208ENST00000589797 H0YIZ8 118 aa12.44□□□□□ -0.42
RETREG3-208ENST00000589797 PGLYRP1O75594 196 aaPredicted RBP12.44□□□□□ -0.42
RETREG3-208ENST00000589797 APOA2P02652 100 aa12.44□□□□□ -0.42
RETREG3-208ENST00000589797 PRB3Q04118 309 aaPredicted RBP12.44□□□□□ -0.42
RETREG3-208ENST00000589797 C1orf87Q8N0U7 546 aa12.44□□□□□ -0.42
RETREG3-208ENST00000589797 PRR7Q8TB68 274 aa12.44□□□□□ -0.42
RETREG3-208ENST00000589797 MOB3AQ96BX8 217 aa12.44□□□□□ -0.42
RETREG3-208ENST00000589797 SAP30LQ9HAJ7 183 aa12.44□□□□□ -0.42
RETREG3-208ENST00000589797 MMP26Q9NRE1 261 aa12.44□□□□□ -0.42
RETREG3-208ENST00000589797 GAB2Q9UQC2 676 aa12.44□□□□□ -0.42
RETREG3-208ENST00000589797 PTPRSQ13332 1948 aa12.43□□□□□ -0.42
RETREG3-208ENST00000589797 CYB5R3P00387 301 aaPredicted RBP12.43□□□□□ -0.42
RETREG3-208ENST00000589797 MT-CO2P00403 227 aa12.43□□□□□ -0.42
RETREG3-208ENST00000589797 CRYGSP22914 178 aa12.43□□□□□ -0.42
RETREG3-208ENST00000589797 Q6ZT83 130 aa12.43□□□□□ -0.42
RETREG3-208ENST00000589797 OR5P3Q8WZ94 311 aa12.43□□□□□ -0.42
RETREG3-208ENST00000589797 TMEM230Q96A57 120 aa12.43□□□□□ -0.42
RETREG3-208ENST00000589797 TMEM68Q96MH6 324 aa12.43□□□□□ -0.42
RETREG3-208ENST00000589797 C1QTNF5Q9BXJ0 243 aa12.43□□□□□ -0.42
RETREG3-208ENST00000589797 Q9N2K0 584 aa12.43□□□□□ -0.42
RETREG3-208ENST00000589797 WSB1Q9Y6I7 421 aa12.43□□□□□ -0.42
RETREG3-208ENST00000589797 C17orf112F2Z3M2 114 aa12.43□□□□□ -0.42
RETREG3-208ENST00000589797 DEFA4P12838 97 aa12.43□□□□□ -0.42
RETREG3-208ENST00000589797 CD82P27701 267 aa12.43□□□□□ -0.42
RETREG3-208ENST00000589797 RAB39BQ96DA2 213 aa12.43□□□□□ -0.42
RETREG3-208ENST00000589797 LRFN3Q9BTN0 628 aa12.43□□□□□ -0.42
RETREG3-208ENST00000589797 SLC2A8Q9NY64 477 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms