RNA–Protein interactions for RNA: ENST00000589285.1

ZNF540-207, Transcript of zinc finger protein 540, humanhuman

Gene ZNF540, Length 3,106 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-207ENST00000589285 ANKRD30BLA7E2S9 258 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 FAM90A26D6RGX4 464 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 NDUFS8O00217 210 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 WRBO00258 174 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 SSX4O60224 188 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 GMDSO60547 372 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 UBL3O95164 117 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 IGHMP01871 453 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 MBP02144 154 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 FABP1P07148 127 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 ZNF14P17017 642 aaPredicted RBP2.71□□□□□ -1.98
ZNF540-207ENST00000589285 ARR3P36575 388 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 TALDO1P37837 337 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 SRP9P49458 86 aaKnown RBP2.71□□□□□ -1.98
ZNF540-207ENST00000589285 MFAP4P55083 255 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 SEC61BP60468 96 aaKnown RBP2.71□□□□□ -1.98
ZNF540-207ENST00000589285 LSM6P62312 80 aaKnown RBP2.71□□□□□ -1.98
ZNF540-207ENST00000589285 P2RY6Q15077 328 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 OR8G1Q15617 311 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 OR8B8Q15620 311 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 KISS1Q15726 138 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 TMEM244Q5VVB8 128 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 SLC25A24Q6NUK1 477 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 SFXN4Q6P4A7 337 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 GLDNQ6ZMI3 551 aaPredicted RBP2.71□□□□□ -1.98
ZNF540-207ENST00000589285 DPPA2Q7Z7J5 298 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 FAM219AQ8IW50 185 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 MUC15Q8N387 334 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 ZNF485Q8NCK3 441 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 OR5D14Q8NGL3 314 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 SYNPRQ8TBG9 265 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 RAB2BQ8WUD1 216 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 IL1F10Q8WWZ1 152 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 S100ZQ8WXG8 99 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 ASB17Q8WXJ9 295 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 OR2V2Q96R30 315 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 DCTN5Q9BTE1 182 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 CACNG6Q9BXT2 260 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 SLITRK2Q9H156 845 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 HMG20AQ9NP66 347 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 ZNF701Q9NV72 531 aaPredicted RBP2.71□□□□□ -1.98
ZNF540-207ENST00000589285 HAO2Q9NYQ3 351 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 PDZD2O15018 2839 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 A0A0X1KG70 313 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 LRP5LA4QPB2 252 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 TMEM212A6NML5 194 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 E7EQL1 145 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 SLC33A1O00400 549 aaPredicted RBP2.71□□□□□ -1.98
ZNF540-207ENST00000589285 PHF1O43189 567 aaPredicted RBP2.71□□□□□ -1.98
ZNF540-207ENST00000589285 DHRS3O75911 302 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 GNB3P16520 340 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 RAB3AP20336 220 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 PSMB1P20618 241 aaKnown RBP2.71□□□□□ -1.98
ZNF540-207ENST00000589285 GALP22466 123 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 CRYGSP22914 178 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 HLA-DMAP28067 261 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 HTR2CP28335 458 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 EDDM3BP56851 147 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 KLF3P57682 345 aaPredicted RBP2.71□□□□□ -1.98
ZNF540-207ENST00000589285 SPCS3P61009 180 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 GRB2P62993 217 aaKnown RBP2.71□□□□□ -1.98
ZNF540-207ENST00000589285 ZNF45Q02386 682 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 RIPPLY1Q0D2K3 151 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 TPBGQ13641 420 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 GGTLC2Q14390 218 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 ATXN7L3Q14CW9 347 aaPredicted RBP2.71□□□□□ -1.98
ZNF540-207ENST00000589285 RSU1Q15404 277 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 PYDC2Q56P42 97 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 TIMM23BQ5SRD1 257 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 ZNF684Q5T5D7 378 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 TMEM211Q6ICI0 200 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 DRAM2Q6UX65 266 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 PAMR1Q6UXH9 720 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 Q6ZR03 302 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 C6orf201Q7Z4U5 140 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 LRRTM1Q86UE6 522 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 GVQW1Q8N7I0 195 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 ZNRF1Q8ND25 227 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 STEAP2Q8NFT2 490 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 OR1M1Q8NGA1 313 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 OR4D10Q8NGI6 311 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 APOBEC3DQ96AK3 386 aaPredicted RBP2.71□□□□□ -1.98
ZNF540-207ENST00000589285 TMEM45BQ96B21 275 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 YIPF6Q96EC8 236 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 MRPL48Q96GC5 212 aaKnown RBP2.71□□□□□ -1.98
ZNF540-207ENST00000589285 LURAP1Q96LR2 239 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 ABHD1Q96SE0 405 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 TXN2Q99757 166 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 AUNIPQ9H7T9 357 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 MCUBQ9NWR8 336 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 NUFIP1Q9UHK0 495 aaKnown RBP2.71□□□□□ -1.98
ZNF540-207ENST00000589285 ZNF391Q9UJN7 358 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 RNF24Q9Y225 148 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 ZNF835Q9Y2P0 537 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 V9GY05 133 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 STAB1Q9NY15 2570 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 COL6A5A8TX70 2615 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 IGHV3OR16-10A0A075B7F0 116 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 A0A1W2PPE3 182 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 IRGMA1A4Y4 181 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms