RNA–Protein interactions for RNA: ENST00000589219.1

VPS25-202, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-202ENST00000589219 VDAC1P21796 283 aa8.4□□□□□ -1.06
VPS25-202ENST00000589219 CA7P43166 264 aa8.4□□□□□ -1.06
VPS25-202ENST00000589219 RPS23P62266 143 aaKnown RBP8.4□□□□□ -1.06
VPS25-202ENST00000589219 MSMO1Q15800 293 aa8.4□□□□□ -1.06
VPS25-202ENST00000589219 SMIM21Q3B7S5 101 aa8.4□□□□□ -1.06
VPS25-202ENST00000589219 ALKBH6Q3KRA9 238 aa8.4□□□□□ -1.06
VPS25-202ENST00000589219 SEM1Q6ZVN7 128 aa8.4□□□□□ -1.06
VPS25-202ENST00000589219 SELENOHQ8IZQ5 122 aaKnown RBP8.4□□□□□ -1.06
VPS25-202ENST00000589219 UBAC2Q8NBM4 344 aa8.4□□□□□ -1.06
VPS25-202ENST00000589219 PLPPR1Q8TBJ4 325 aa8.4□□□□□ -1.06
VPS25-202ENST00000589219 TMED6Q8WW62 240 aa8.4□□□□□ -1.06
VPS25-202ENST00000589219 MARC2Q969Z3 335 aa8.4□□□□□ -1.06
VPS25-202ENST00000589219 NARFLQ9H6Q4 476 aa8.4□□□□□ -1.06
VPS25-202ENST00000589219 TAF9BQ9HBM6 251 aa8.4□□□□□ -1.06
VPS25-202ENST00000589219 OR2S2Q9NQN1 319 aa8.4□□□□□ -1.06
VPS25-202ENST00000589219 MMP26Q9NRE1 261 aa8.4□□□□□ -1.06
VPS25-202ENST00000589219 LIN7CQ9NUP9 197 aaKnown RBP8.4□□□□□ -1.06
VPS25-202ENST00000589219 TAS2R3Q9NYW6 316 aa8.4□□□□□ -1.06
VPS25-202ENST00000589219 LPAR3Q9UBY5 353 aa8.4□□□□□ -1.06
VPS25-202ENST00000589219 TINAGQ9UJW2 476 aa8.4□□□□□ -1.06
VPS25-202ENST00000589219 TRAPPC2LQ9UL33 140 aa8.4□□□□□ -1.06
VPS25-202ENST00000589219 RCL1Q9Y2P8 373 aaKnown RBP8.4□□□□□ -1.06
VPS25-202ENST00000589219 SPEF1Q9Y4P9 236 aa8.4□□□□□ -1.06
VPS25-202ENST00000589219 KLF2Q9Y5W3 355 aaPredicted RBP8.4□□□□□ -1.06
VPS25-202ENST00000589219 A6NLC8 198 aa8.39□□□□□ -1.07
VPS25-202ENST00000589219 RNF212BA8MTL3 300 aa8.39□□□□□ -1.07
VPS25-202ENST00000589219 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.39□□□□□ -1.07
VPS25-202ENST00000589219 IFNL4K9M1U5 179 aa8.39□□□□□ -1.07
VPS25-202ENST00000589219 PGLYRP1O75594 196 aaPredicted RBP8.39□□□□□ -1.07
VPS25-202ENST00000589219 WISP2O76076 250 aa8.39□□□□□ -1.07
VPS25-202ENST00000589219 GRPP07492 148 aa8.39□□□□□ -1.07
VPS25-202ENST00000589219 F2RP25116 425 aa8.39□□□□□ -1.07
VPS25-202ENST00000589219 LMO1P25800 156 aa8.39□□□□□ -1.07
VPS25-202ENST00000589219 CD200P41217 278 aa8.39□□□□□ -1.07
VPS25-202ENST00000589219 NKX2-1P43699 371 aaPredicted RBP8.39□□□□□ -1.07
VPS25-202ENST00000589219 SULT1A2P50226 295 aa8.39□□□□□ -1.07
VPS25-202ENST00000589219 TMEM33P57088 247 aa8.39□□□□□ -1.07
VPS25-202ENST00000589219 BLOC1S1P78537 153 aa8.39□□□□□ -1.07
VPS25-202ENST00000589219 NMSQ5H8A3 153 aa8.39□□□□□ -1.07
VPS25-202ENST00000589219 RPL7L1Q6DKI1 246 aaKnown RBP8.39□□□□□ -1.07
VPS25-202ENST00000589219 SLC35E4Q6ICL7 350 aa8.39□□□□□ -1.07
VPS25-202ENST00000589219 TRAT1Q6PIZ9 186 aa8.39□□□□□ -1.07
VPS25-202ENST00000589219 ACP7Q6ZNF0 438 aa8.39□□□□□ -1.07
VPS25-202ENST00000589219 C20orf204Q6ZNR8 217 aa8.39□□□□□ -1.07
VPS25-202ENST00000589219 FAM90A1Q86YD7 464 aa8.39□□□□□ -1.07
VPS25-202ENST00000589219 ZNF808Q8N4W9 903 aaPredicted RBP8.39□□□□□ -1.07
VPS25-202ENST00000589219 OR1S2Q8NGQ3 325 aa8.39□□□□□ -1.07
VPS25-202ENST00000589219 OR10Z1Q8NGY1 313 aa8.39□□□□□ -1.07
VPS25-202ENST00000589219 FAM57AQ8TBR7 257 aa8.39□□□□□ -1.07
VPS25-202ENST00000589219 FAM216AQ8WUB2 273 aa8.39□□□□□ -1.07
VPS25-202ENST00000589219 ITLN2Q8WWU7 325 aaPredicted RBP8.39□□□□□ -1.07
VPS25-202ENST00000589219 USB1Q9BQ65 265 aaKnown RBP8.39□□□□□ -1.07
VPS25-202ENST00000589219 C1QTNF6Q9BXI9 259 aa8.39□□□□□ -1.07
VPS25-202ENST00000589219 ARV1Q9H2C2 271 aa8.39□□□□□ -1.07
VPS25-202ENST00000589219 SEBOXQ9HB31 216 aaPredicted RBP8.39□□□□□ -1.07
VPS25-202ENST00000589219 CCL28Q9NRJ3 127 aa8.39□□□□□ -1.07
VPS25-202ENST00000589219 KCNIP1Q9NZI2 227 aa8.39□□□□□ -1.07
VPS25-202ENST00000589219 FAM215AQ9Y5M1 114 aa8.39□□□□□ -1.07
VPS25-202ENST00000589219 FREM1Q5H8C1 2179 aa8.39□□□□□ -1.07
VPS25-202ENST00000589219 GTF3C1Q12789 2109 aa8.39□□□□□ -1.07
VPS25-202ENST00000589219 NKX2-6A6NCS4 301 aa8.38□□□□□ -1.07
VPS25-202ENST00000589219 OOEPA6NGQ2 149 aa8.38□□□□□ -1.07
VPS25-202ENST00000589219 ZNF705EA8MWA4 302 aaPredicted RBP8.38□□□□□ -1.07
VPS25-202ENST00000589219 H0YL77 283 aa8.38□□□□□ -1.07
VPS25-202ENST00000589219 HSPA12AO43301 675 aa8.38□□□□□ -1.07
VPS25-202ENST00000589219 ADAM20O43506 726 aa8.38□□□□□ -1.07
VPS25-202ENST00000589219 PITX3O75364 302 aa8.38□□□□□ -1.07
VPS25-202ENST00000589219 PTBP3O95758 552 aaKnown RBP8.38□□□□□ -1.07
VPS25-202ENST00000589219 RCC1P18754 421 aaPredicted RBP8.38□□□□□ -1.07
VPS25-202ENST00000589219 CEACAM8P31997 349 aaPredicted RBP8.38□□□□□ -1.07
VPS25-202ENST00000589219 VAMP2P63027 116 aa8.38□□□□□ -1.07
VPS25-202ENST00000589219 PAX5Q02548 391 aa8.38□□□□□ -1.07
VPS25-202ENST00000589219 BAXQ07812 192 aa8.38□□□□□ -1.07
VPS25-202ENST00000589219 WDR82Q6UXN9 313 aa8.38□□□□□ -1.07
VPS25-202ENST00000589219 MRGPRGQ86SM5 289 aa8.38□□□□□ -1.07
VPS25-202ENST00000589219 ZBTB34Q8NCN2 500 aa8.38□□□□□ -1.07
VPS25-202ENST00000589219 OR52M1Q8NGK5 317 aa8.38□□□□□ -1.07
VPS25-202ENST00000589219 SMIM8Q96KF7 97 aa8.38□□□□□ -1.07
VPS25-202ENST00000589219 SLC25A31Q9H0C2 315 aa8.38□□□□□ -1.07
VPS25-202ENST00000589219 TOLLIPQ9H0E2 274 aa8.38□□□□□ -1.07
VPS25-202ENST00000589219 C11orf1Q9H5F2 150 aa8.38□□□□□ -1.07
VPS25-202ENST00000589219 PARP11Q9NR21 331 aa8.38□□□□□ -1.07
VPS25-202ENST00000589219 PLA2G2EQ9NZK7 142 aa8.38□□□□□ -1.07
VPS25-202ENST00000589219 DNAJC13O75165 2243 aa8.37□□□□□ -1.07
VPS25-202ENST00000589219 A0A1B0GU03 582 aa8.37□□□□□ -1.07
VPS25-202ENST00000589219 SERPINE2P07093 398 aa8.37□□□□□ -1.07
VPS25-202ENST00000589219 SEC11BP0C7V7 166 aa8.37□□□□□ -1.07
VPS25-202ENST00000589219 FAM157CP0CG43 387 aa8.37□□□□□ -1.07
VPS25-202ENST00000589219 AGAP20933 346 aa8.37□□□□□ -1.07
VPS25-202ENST00000589219 RAB5CP51148 216 aa8.37□□□□□ -1.07
VPS25-202ENST00000589219 EWSR1Q01844 656 aaKnown RBP eCLIP8.37□□□□□ -1.07
VPS25-202ENST00000589219 PJVKQ0ZLH3 352 aa8.37□□□□□ -1.07
VPS25-202ENST00000589219 ZNF266Q14584 549 aa8.37□□□□□ -1.07
VPS25-202ENST00000589219 TESK1Q15569 626 aa8.37□□□□□ -1.07
VPS25-202ENST00000589219 SWI5Q1ZZU3 235 aa8.37□□□□□ -1.07
VPS25-202ENST00000589219 Q6ZR03 302 aa8.37□□□□□ -1.07
VPS25-202ENST00000589219 SSX8Q7RTT4 187 aa8.37□□□□□ -1.07
VPS25-202ENST00000589219 MED12LQ86YW9 2145 aa8.37□□□□□ -1.07
VPS25-202ENST00000589219 FAM219AQ8IW50 185 aa8.37□□□□□ -1.07
VPS25-202ENST00000589219 C11orf53Q8IXP5 236 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms