RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 CHST1O43916 411 aa6.28□□□□□ -1.4
ZNF540-206ENST00000589117 HBE1P02100 147 aa6.28□□□□□ -1.4
ZNF540-206ENST00000589117 ACAA1P09110 424 aaPredicted RBP6.28□□□□□ -1.4
ZNF540-206ENST00000589117 IGKV1-13P0DP09 117 aa6.28□□□□□ -1.4
ZNF540-206ENST00000589117 ZNF14P17017 642 aaPredicted RBP6.28□□□□□ -1.4
ZNF540-206ENST00000589117 OMGP23515 440 aa6.28□□□□□ -1.4
ZNF540-206ENST00000589117 PAX6P26367 422 aa6.28□□□□□ -1.4
ZNF540-206ENST00000589117 NPBWR1P48145 328 aa6.28□□□□□ -1.4
ZNF540-206ENST00000589117 TNFSF10P50591 281 aa6.28□□□□□ -1.4
ZNF540-206ENST00000589117 MZT1Q08AG7 82 aa6.28□□□□□ -1.4
ZNF540-206ENST00000589117 AKR1C8PQ5T2L2 129 aa6.28□□□□□ -1.4
ZNF540-206ENST00000589117 ZNF324BQ6AW86 544 aaPredicted RBP6.28□□□□□ -1.4
ZNF540-206ENST00000589117 PCSK4Q6UW60 755 aa6.28□□□□□ -1.4
ZNF540-206ENST00000589117 CLEC9AQ6UXN8 241 aa6.28□□□□□ -1.4
ZNF540-206ENST00000589117 Q6ZT83 130 aa6.28□□□□□ -1.4
ZNF540-206ENST00000589117 CBLN2Q8IUK8 224 aa6.28□□□□□ -1.4
ZNF540-206ENST00000589117 C15orf54Q8N8G6 183 aa6.28□□□□□ -1.4
ZNF540-206ENST00000589117 OR5C1Q8NGR4 320 aa6.28□□□□□ -1.4
ZNF540-206ENST00000589117 LSM10Q969L4 123 aaKnown RBP6.28□□□□□ -1.4
ZNF540-206ENST00000589117 RAX2Q96IS3 184 aa6.28□□□□□ -1.4
ZNF540-206ENST00000589117 PARP12Q9H0J9 701 aaKnown RBP6.28□□□□□ -1.4
ZNF540-206ENST00000589117 WFDC1Q9HC57 220 aa6.28□□□□□ -1.4
ZNF540-206ENST00000589117 BIN3Q9NQY0 253 aa6.28□□□□□ -1.4
ZNF540-206ENST00000589117 IL36RNQ9UBH0 155 aa6.28□□□□□ -1.4
ZNF540-206ENST00000589117 COL27A1Q8IZC6 1860 aaPredicted RBP6.28□□□□□ -1.4
ZNF540-206ENST00000589117 TECTAO75443 2155 aa6.28□□□□□ -1.4
ZNF540-206ENST00000589117 IGKV1-6A0A0C4DH72 117 aa6.27□□□□□ -1.41
ZNF540-206ENST00000589117 M0R036 132 aa6.27□□□□□ -1.41
ZNF540-206ENST00000589117 HBG1P69891 147 aa6.27□□□□□ -1.41
ZNF540-206ENST00000589117 HBG2P69892 147 aa6.27□□□□□ -1.41
ZNF540-206ENST00000589117 ZNF146Q15072 292 aa6.27□□□□□ -1.41
ZNF540-206ENST00000589117 HFEQ30201 348 aa6.27□□□□□ -1.41
ZNF540-206ENST00000589117 CXorf66Q5JRM2 361 aaPredicted RBP6.27□□□□□ -1.41
ZNF540-206ENST00000589117 SPATA46Q5T0L3 261 aa6.27□□□□□ -1.41
ZNF540-206ENST00000589117 ZNF497Q6ZNH5 498 aa6.27□□□□□ -1.41
ZNF540-206ENST00000589117 TMEM182Q6ZP80 229 aaPredicted RBP6.27□□□□□ -1.41
ZNF540-206ENST00000589117 RNF152Q8N8N0 203 aa6.27□□□□□ -1.41
ZNF540-206ENST00000589117 SCCPDHQ8NBX0 429 aa6.27□□□□□ -1.41
ZNF540-206ENST00000589117 SCGB1C1Q8TD33 95 aa6.27□□□□□ -1.41
ZNF540-206ENST00000589117 RBMXL1Q96E39 390 aaKnown RBP6.27□□□□□ -1.41
ZNF540-206ENST00000589117 ZNF488Q96MN9 340 aa6.27□□□□□ -1.41
ZNF540-206ENST00000589117 ADAT1Q9BUB4 502 aaKnown RBP6.27□□□□□ -1.41
ZNF540-206ENST00000589117 OR2J1Q9GZK6 312 aa6.27□□□□□ -1.41
ZNF540-206ENST00000589117 RPS10P5Q9NQ39 176 aa6.27□□□□□ -1.41
ZNF540-206ENST00000589117 RNF150Q9ULK6 438 aa6.27□□□□□ -1.41
ZNF540-206ENST00000589117 LIPGQ9Y5X9 500 aa6.27□□□□□ -1.41
ZNF540-206ENST00000589117 WSB1Q9Y6I7 421 aa6.27□□□□□ -1.41
ZNF540-206ENST00000589117 TNRC6AQ8NDV7 1962 aaKnown RBP6.27□□□□□ -1.41
ZNF540-206ENST00000589117 VPS13AQ96RL7 3174 aa6.27□□□□□ -1.41
ZNF540-206ENST00000589117 IQCF6A8MYZ5 107 aa6.27□□□□□ -1.41
ZNF540-206ENST00000589117 TNFSF12O43508 249 aa6.27□□□□□ -1.41
ZNF540-206ENST00000589117 SMPD2O60906 423 aa6.27□□□□□ -1.41
ZNF540-206ENST00000589117 OR2H2O95918 312 aa6.27□□□□□ -1.41
ZNF540-206ENST00000589117 ATP6V0CP27449 155 aa6.27□□□□□ -1.41
ZNF540-206ENST00000589117 RAB13P51153 203 aa6.27□□□□□ -1.41
ZNF540-206ENST00000589117 IDH3GP51553 393 aaPredicted RBP6.27□□□□□ -1.41
ZNF540-206ENST00000589117 RAB5BP61020 215 aa6.27□□□□□ -1.41
ZNF540-206ENST00000589117 RHEBQ15382 184 aa6.27□□□□□ -1.41
ZNF540-206ENST00000589117 TGIF1Q15583 401 aa6.27□□□□□ -1.41
ZNF540-206ENST00000589117 SOHLH1Q5JUK2 328 aa6.27□□□□□ -1.41
ZNF540-206ENST00000589117 OR1J1Q8NGS3 322 aa6.27□□□□□ -1.41
ZNF540-206ENST00000589117 OR51H1Q8NH63 302 aa6.27□□□□□ -1.41
ZNF540-206ENST00000589117 SARAFQ96BY9 339 aa6.27□□□□□ -1.41
ZNF540-206ENST00000589117 GALMQ96C23 342 aa6.27□□□□□ -1.41
ZNF540-206ENST00000589117 ATP5SQ99766 215 aa6.27□□□□□ -1.41
ZNF540-206ENST00000589117 MAGT1Q9H0U3 335 aa6.27□□□□□ -1.41
ZNF540-206ENST00000589117 TUBA4BQ9H853 241 aa6.27□□□□□ -1.41
ZNF540-206ENST00000589117 OBP2BQ9NPH6 170 aa6.27□□□□□ -1.41
ZNF540-206ENST00000589117 SPRR3Q9UBC9 169 aa6.27□□□□□ -1.41
ZNF540-206ENST00000589117 R4GN57 208 aa6.27□□□□□ -1.41
ZNF540-206ENST00000589117 PCSK5Q92824 1860 aa6.26□□□□□ -1.41
ZNF540-206ENST00000589117 TRAV17A0A0B4J275 112 aa6.26□□□□□ -1.41
ZNF540-206ENST00000589117 IGSF23A1L1A6 192 aa6.26□□□□□ -1.41
ZNF540-206ENST00000589117 PROB1E7EW31 1015 aa6.26□□□□□ -1.41
ZNF540-206ENST00000589117 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.26□□□□□ -1.41
ZNF540-206ENST00000589117 SLC33A1O00400 549 aaPredicted RBP6.26□□□□□ -1.41
ZNF540-206ENST00000589117 RHBDL1O75783 438 aa6.26□□□□□ -1.41
ZNF540-206ENST00000589117 IGHG3P01860 377 aa6.26□□□□□ -1.41
ZNF540-206ENST00000589117 MT-ND4LP03901 98 aa6.26□□□□□ -1.41
ZNF540-206ENST00000589117 PGA5P0DJD9 388 aa6.26□□□□□ -1.41
ZNF540-206ENST00000589117 CEACAM1P13688 526 aa6.26□□□□□ -1.41
ZNF540-206ENST00000589117 CBR1P16152 277 aa6.26□□□□□ -1.41
ZNF540-206ENST00000589117 SULT1A1P50225 295 aa6.26□□□□□ -1.41
ZNF540-206ENST00000589117 CCL11P51671 97 aa6.26□□□□□ -1.41
ZNF540-206ENST00000589117 DYNLT3P51808 116 aa6.26□□□□□ -1.41
ZNF540-206ENST00000589117 ERVK11-1P61568 191 aa6.26□□□□□ -1.41
ZNF540-206ENST00000589117 Q6P435 159 aa6.26□□□□□ -1.41
ZNF540-206ENST00000589117 C17orf78Q8N4C9 275 aa6.26□□□□□ -1.41
ZNF540-206ENST00000589117 CD300LFQ8TDQ1 290 aa6.26□□□□□ -1.41
ZNF540-206ENST00000589117 BSCL2Q96G97 398 aaPredicted RBP6.26□□□□□ -1.41
ZNF540-206ENST00000589117 TRIB1Q96RU8 372 aa6.26□□□□□ -1.41
ZNF540-206ENST00000589117 SH3BGRL3Q9H299 93 aa6.26□□□□□ -1.41
ZNF540-206ENST00000589117 SAV1Q9H4B6 383 aaPredicted RBP6.26□□□□□ -1.41
ZNF540-206ENST00000589117 C11orf1Q9H5F2 150 aa6.26□□□□□ -1.41
ZNF540-206ENST00000589117 ZDHHC8Q9ULC8 765 aa6.26□□□□□ -1.41
ZNF540-206ENST00000589117 KCNS2Q9ULS6 477 aa6.26□□□□□ -1.41
ZNF540-206ENST00000589117 KMT2EQ8IZD2 1858 aa6.26□□□□□ -1.41
ZNF540-206ENST00000589117 AHCTF1Q8WYP5 2266 aa6.26□□□□□ -1.41
ZNF540-206ENST00000589117 TMEM30CPA0ZSE6 113 aa6.26□□□□□ -1.41
ZNF540-206ENST00000589117 RBFOX3A6NFN3 312 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms