RNA–Protein interactions for RNA: ENST00000588284.1

CHMP1B-202, Transcript of charged multivesicular body protein 1B, humanhuman

TSL 3

Gene CHMP1B, Length 435 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1B-202ENST00000588284 IGHV2-70P01814 119 aa8.72□□□□□ -1.01
CHMP1B-202ENST00000588284 LYNX1P0DP58 116 aa8.72□□□□□ -1.01
CHMP1B-202ENST00000588284 VAMP1P23763 118 aa8.72□□□□□ -1.01
CHMP1B-202ENST00000588284 CD34P28906 385 aa8.72□□□□□ -1.01
CHMP1B-202ENST00000588284 RND3P61587 244 aa8.72□□□□□ -1.01
CHMP1B-202ENST00000588284 SRSF1Q07955 248 aaKnown RBP eCLIP8.72□□□□□ -1.01
CHMP1B-202ENST00000588284 PPP1R1AQ13522 171 aa8.72□□□□□ -1.01
CHMP1B-202ENST00000588284 MSMO1Q15800 293 aa8.72□□□□□ -1.01
CHMP1B-202ENST00000588284 LIN54Q6MZP7 749 aa8.72□□□□□ -1.01
CHMP1B-202ENST00000588284 CLEC18BQ6UXF7 455 aa8.72□□□□□ -1.01
CHMP1B-202ENST00000588284 KCTD9Q7L273 389 aa8.72□□□□□ -1.01
CHMP1B-202ENST00000588284 NLRC3Q7RTR2 1065 aa8.72□□□□□ -1.01
CHMP1B-202ENST00000588284 TPRX1Q8N7U7 411 aa8.72□□□□□ -1.01
CHMP1B-202ENST00000588284 UXS1Q8NBZ7 420 aa8.72□□□□□ -1.01
CHMP1B-202ENST00000588284 CLEC18CQ8NCF0 446 aa8.72□□□□□ -1.01
CHMP1B-202ENST00000588284 OR2AK2Q8NG84 335 aa8.72□□□□□ -1.01
CHMP1B-202ENST00000588284 OR10V1Q8NGI7 309 aa8.72□□□□□ -1.01
CHMP1B-202ENST00000588284 OR1L1Q8NH94 360 aa8.72□□□□□ -1.01
CHMP1B-202ENST00000588284 MITD1Q8WV92 249 aa8.72□□□□□ -1.01
CHMP1B-202ENST00000588284 EDARADDQ8WWZ3 215 aa8.72□□□□□ -1.01
CHMP1B-202ENST00000588284 ASB13Q8WXK3 278 aa8.72□□□□□ -1.01
CHMP1B-202ENST00000588284 RAB39BQ96DA2 213 aa8.72□□□□□ -1.01
CHMP1B-202ENST00000588284 FXYD6Q9H0Q3 95 aa8.72□□□□□ -1.01
CHMP1B-202ENST00000588284 GAL3ST2Q9H3Q3 398 aa8.72□□□□□ -1.01
CHMP1B-202ENST00000588284 PLEKHF2Q9H8W4 249 aa8.72□□□□□ -1.01
CHMP1B-202ENST00000588284 OR2S2Q9NQN1 319 aa8.72□□□□□ -1.01
CHMP1B-202ENST00000588284 RDH8Q9NYR8 311 aa8.72□□□□□ -1.01
CHMP1B-202ENST00000588284 CLN8Q9UBY8 286 aa8.72□□□□□ -1.01
CHMP1B-202ENST00000588284 JPT1Q9UK76 154 aa8.72□□□□□ -1.01
CHMP1B-202ENST00000588284 LINC00312Q9Y6C7 94 aa8.72□□□□□ -1.01
CHMP1B-202ENST00000588284 TEX15Q9BXT5 2789 aa8.72□□□□□ -1.01
CHMP1B-202ENST00000588284 DOPEY2Q9Y3R5 2298 aa8.71□□□□□ -1.01
CHMP1B-202ENST00000588284 TRBV23-1A0A0A0MS06 115 aa8.71□□□□□ -1.02
CHMP1B-202ENST00000588284 A0A1W2PPH5 198 aa8.71□□□□□ -1.02
CHMP1B-202ENST00000588284 CRYM-AS1A6NIL9 109 aa8.71□□□□□ -1.02
CHMP1B-202ENST00000588284 F2RL2O00254 374 aa8.71□□□□□ -1.02
CHMP1B-202ENST00000588284 DVL1O14640 695 aa8.71□□□□□ -1.02
CHMP1B-202ENST00000588284 ITGB1BP1O14713 200 aa8.71□□□□□ -1.02
CHMP1B-202ENST00000588284 YPEL1O60688 119 aa8.71□□□□□ -1.02
CHMP1B-202ENST00000588284 B3GALNT1O75752 331 aa8.71□□□□□ -1.02
CHMP1B-202ENST00000588284 IFNA2P01563 188 aa8.71□□□□□ -1.02
CHMP1B-202ENST00000588284 RNF224P0DH78 156 aa8.71□□□□□ -1.02
CHMP1B-202ENST00000588284 HLA-GP17693 338 aa8.71□□□□□ -1.02
CHMP1B-202ENST00000588284 PI3P19957 117 aa8.71□□□□□ -1.02
CHMP1B-202ENST00000588284 GNRHRP30968 328 aa8.71□□□□□ -1.02
CHMP1B-202ENST00000588284 RBMXP38159 391 aaKnown RBP8.71□□□□□ -1.02
CHMP1B-202ENST00000588284 PIGPP57054 158 aa8.71□□□□□ -1.02
CHMP1B-202ENST00000588284 RPL31P62899 125 aaKnown RBP8.71□□□□□ -1.02
CHMP1B-202ENST00000588284 BAMBIQ13145 260 aa8.71□□□□□ -1.02
CHMP1B-202ENST00000588284 C11orf91Q3C1V1 193 aa8.71□□□□□ -1.02
CHMP1B-202ENST00000588284 LY6G6FQ5SQ64 297 aa8.71□□□□□ -1.02
CHMP1B-202ENST00000588284 LYPD2Q6UXB3 125 aa8.71□□□□□ -1.02
CHMP1B-202ENST00000588284 C5orf24Q7Z6I8 188 aa8.71□□□□□ -1.02
CHMP1B-202ENST00000588284 OR52B4Q8NGK2 314 aa8.71□□□□□ -1.02
CHMP1B-202ENST00000588284 OR52M1Q8NGK5 317 aa8.71□□□□□ -1.02
CHMP1B-202ENST00000588284 RFESDQ8TAC1 157 aa8.71□□□□□ -1.02
CHMP1B-202ENST00000588284 SECTM1Q8WVN6 248 aa8.71□□□□□ -1.02
CHMP1B-202ENST00000588284 RTN4IP1Q8WWV3 396 aaPredicted RBP8.71□□□□□ -1.02
CHMP1B-202ENST00000588284 TMEM230Q96A57 120 aa8.71□□□□□ -1.02
CHMP1B-202ENST00000588284 NEIL1Q96FI4 390 aaPredicted RBP8.71□□□□□ -1.02
CHMP1B-202ENST00000588284 GALNT14Q96FL9 552 aa8.71□□□□□ -1.02
CHMP1B-202ENST00000588284 ST6GAL2Q96JF0 529 aa8.71□□□□□ -1.02
CHMP1B-202ENST00000588284 YPEL2Q96QA6 119 aa8.71□□□□□ -1.02
CHMP1B-202ENST00000588284 SUCNR1Q9BXA5 334 aa8.71□□□□□ -1.02
CHMP1B-202ENST00000588284 LINC00574Q9H8X3 128 aa8.71□□□□□ -1.02
CHMP1B-202ENST00000588284 CALYQ9NYX4 217 aa8.71□□□□□ -1.02
CHMP1B-202ENST00000588284 MGAT4CQ9UBM8 478 aa8.71□□□□□ -1.02
CHMP1B-202ENST00000588284 SPTBN1Q01082 2364 aaKnown RBP8.7□□□□□ -1.02
CHMP1B-202ENST00000588284 MPPED1O15442 326 aa8.7□□□□□ -1.02
CHMP1B-202ENST00000588284 SNAPC5O75971 98 aa8.7□□□□□ -1.02
CHMP1B-202ENST00000588284 WNT2P09544 360 aa8.7□□□□□ -1.02
CHMP1B-202ENST00000588284 SELLP14151 372 aa8.7□□□□□ -1.02
CHMP1B-202ENST00000588284 CDKN1AP38936 164 aa8.7□□□□□ -1.02
CHMP1B-202ENST00000588284 GPR6P46095 362 aaPredicted RBP8.7□□□□□ -1.02
CHMP1B-202ENST00000588284 SRPXP78539 464 aa8.7□□□□□ -1.02
CHMP1B-202ENST00000588284 CD83Q01151 205 aa8.7□□□□□ -1.02
CHMP1B-202ENST00000588284 TCTE3Q8IZS6 198 aa8.7□□□□□ -1.02
CHMP1B-202ENST00000588284 BVESQ8NE79 360 aa8.7□□□□□ -1.02
CHMP1B-202ENST00000588284 OR11H7Q8NGC8 314 aa8.7□□□□□ -1.02
CHMP1B-202ENST00000588284 OR8B3Q8NGG8 313 aa8.7□□□□□ -1.02
CHMP1B-202ENST00000588284 OR52L2PQ8NGH6 319 aa8.7□□□□□ -1.02
CHMP1B-202ENST00000588284 CASTOR1Q8WTX7 329 aa8.7□□□□□ -1.02
CHMP1B-202ENST00000588284 OR8B2Q96RD0 313 aa8.7□□□□□ -1.02
CHMP1B-202ENST00000588284 DCTN5Q9BTE1 182 aa8.7□□□□□ -1.02
CHMP1B-202ENST00000588284 ZNF436Q9C0F3 470 aaPredicted RBP8.7□□□□□ -1.02
CHMP1B-202ENST00000588284 NAA60Q9H7X0 242 aa8.7□□□□□ -1.02
CHMP1B-202ENST00000588284 BARX1Q9HBU1 254 aaPredicted RBP8.7□□□□□ -1.02
CHMP1B-202ENST00000588284 CCL28Q9NRJ3 127 aa8.7□□□□□ -1.02
CHMP1B-202ENST00000588284 SLC2A9Q9NRM0 540 aa8.7□□□□□ -1.02
CHMP1B-202ENST00000588284 IDI2-AS1Q9NZ38 188 aa8.7□□□□□ -1.02
CHMP1B-202ENST00000588284 OR1A1Q9P1Q5 309 aa8.7□□□□□ -1.02
CHMP1B-202ENST00000588284 GNG12Q9UBI6 72 aa8.7□□□□□ -1.02
CHMP1B-202ENST00000588284 CACNA1DQ01668 2161 aa8.7□□□□□ -1.02
CHMP1B-202ENST00000588284 ROS1P08922 2347 aa8.7□□□□□ -1.02
CHMP1B-202ENST00000588284 SPENQ96T58 3664 aaKnown RBP8.69□□□□□ -1.02
CHMP1B-202ENST00000588284 A0A1B0GW55 424 aa8.69□□□□□ -1.02
CHMP1B-202ENST00000588284 RNF212BA8MTL3 300 aa8.69□□□□□ -1.02
CHMP1B-202ENST00000588284 OR2A4O95047 310 aa8.69□□□□□ -1.02
CHMP1B-202ENST00000588284 GIPP09681 153 aaPredicted RBP8.69□□□□□ -1.02
CHMP1B-202ENST00000588284 OR8U9P0C7N5 309 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms