RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 RND3P61587 244 aa12.39□□□□□ -0.43
CCDC43-203ENST00000588210 EWSR1Q01844 656 aaKnown RBP eCLIP12.39□□□□□ -0.43
CCDC43-203ENST00000588210 GNMTQ14749 295 aa12.39□□□□□ -0.43
CCDC43-203ENST00000588210 TIMM23BQ5SRD1 257 aa12.39□□□□□ -0.43
CCDC43-203ENST00000588210 SLC25A26Q70HW3 274 aa12.39□□□□□ -0.43
CCDC43-203ENST00000588210 ZNF295-AS1Q8N0V1 137 aa12.39□□□□□ -0.43
CCDC43-203ENST00000588210 C17orf78Q8N4C9 275 aa12.39□□□□□ -0.43
CCDC43-203ENST00000588210 TMEM222Q9H0R3 208 aa12.39□□□□□ -0.43
CCDC43-203ENST00000588210 SH3BGRL3Q9H299 93 aa12.39□□□□□ -0.43
CCDC43-203ENST00000588210 OR5H1A6NKK0 313 aa12.39□□□□□ -0.43
CCDC43-203ENST00000588210 K7N7A8 449 aa12.39□□□□□ -0.43
CCDC43-203ENST00000588210 NHLH2Q02577 135 aa12.39□□□□□ -0.43
CCDC43-203ENST00000588210 HABP2Q14520 560 aaPredicted RBP12.39□□□□□ -0.43
CCDC43-203ENST00000588210 PDCD1Q15116 288 aa12.39□□□□□ -0.43
CCDC43-203ENST00000588210 AWAT1Q58HT5 328 aa12.39□□□□□ -0.43
CCDC43-203ENST00000588210 C9orf135Q5VTT2 229 aa12.39□□□□□ -0.43
CCDC43-203ENST00000588210 ETV3LQ6ZN32 361 aa12.39□□□□□ -0.43
CCDC43-203ENST00000588210 DPPA2Q7Z7J5 298 aa12.39□□□□□ -0.43
CCDC43-203ENST00000588210 LFNGQ8NES3 379 aa12.39□□□□□ -0.43
CCDC43-203ENST00000588210 C2CD4CQ8TF44 421 aa12.39□□□□□ -0.43
CCDC43-203ENST00000588210 ABHD14BQ96IU4 210 aa12.39□□□□□ -0.43
CCDC43-203ENST00000588210 TMEM56Q96MV1 263 aa12.39□□□□□ -0.43
CCDC43-203ENST00000588210 CLCC1Q96S66 551 aa12.39□□□□□ -0.43
CCDC43-203ENST00000588210 C12orf57Q99622 126 aa12.39□□□□□ -0.43
CCDC43-203ENST00000588210 SPIN2AQ99865 258 aa12.39□□□□□ -0.43
CCDC43-203ENST00000588210 SPIN2BQ9BPZ2 258 aa12.39□□□□□ -0.43
CCDC43-203ENST00000588210 TUBA4BQ9H853 241 aa12.39□□□□□ -0.43
CCDC43-203ENST00000588210 TMEM56-RWDD3S4R434 201 aa12.39□□□□□ -0.43
CCDC43-203ENST00000588210 A0A1B0GW64 132 aa12.38□□□□□ -0.43
CCDC43-203ENST00000588210 PCP4L1A6NKN8 68 aa12.38□□□□□ -0.43
CCDC43-203ENST00000588210 THBDP07204 575 aa12.38□□□□□ -0.43
CCDC43-203ENST00000588210 PTAFRP25105 342 aa12.38□□□□□ -0.43
CCDC43-203ENST00000588210 NPBWR2P48146 333 aa12.38□□□□□ -0.43
CCDC43-203ENST00000588210 RNF212Q495C1 297 aa12.38□□□□□ -0.43
CCDC43-203ENST00000588210 IGSF11Q5DX21 431 aa12.38□□□□□ -0.43
CCDC43-203ENST00000588210 SAXO1Q8IYX7 474 aa12.38□□□□□ -0.43
CCDC43-203ENST00000588210 CPEB3Q8NE35 698 aaKnown RBP12.38□□□□□ -0.43
CCDC43-203ENST00000588210 SFT2D1Q8WV19 159 aa12.38□□□□□ -0.43
CCDC43-203ENST00000588210 HIST1H2BAQ96A08 127 aa12.38□□□□□ -0.43
CCDC43-203ENST00000588210 MUCL1Q96DR8 90 aa12.38□□□□□ -0.43
CCDC43-203ENST00000588210 A6NNC1 897 aa12.38□□□□□ -0.43
CCDC43-203ENST00000588210 PITX3O75364 302 aa12.38□□□□□ -0.43
CCDC43-203ENST00000588210 PRH1P02810 166 aa12.38□□□□□ -0.43
CCDC43-203ENST00000588210 GNRHRP30968 328 aa12.38□□□□□ -0.43
CCDC43-203ENST00000588210 FHITP49789 147 aa12.38□□□□□ -0.43
CCDC43-203ENST00000588210 ZFP82Q8N141 532 aa12.38□□□□□ -0.43
CCDC43-203ENST00000588210 OR2C3Q8N628 320 aa12.38□□□□□ -0.43
CCDC43-203ENST00000588210 HSD17B11Q8NBQ5 300 aa12.38□□□□□ -0.43
CCDC43-203ENST00000588210 OR1K1Q8NGR3 316 aa12.38□□□□□ -0.43
CCDC43-203ENST00000588210 PBDC1Q9BVG4 233 aa12.38□□□□□ -0.43
CCDC43-203ENST00000588210 SPACA1Q9HBV2 294 aa12.38□□□□□ -0.43
CCDC43-203ENST00000588210 RPS10P5Q9NQ39 176 aa12.38□□□□□ -0.43
CCDC43-203ENST00000588210 ANKHD1Q8IWZ3 2542 aaKnown RBP12.37□□□□□ -0.43
CCDC43-203ENST00000588210 DUXBA0A1W2PPF3 345 aa12.37□□□□□ -0.43
CCDC43-203ENST00000588210 C7orf77A4D0Y5 90 aa12.37□□□□□ -0.43
CCDC43-203ENST00000588210 NAPSAO96009 420 aa12.37□□□□□ -0.43
CCDC43-203ENST00000588210 HOXC12P31275 282 aa12.37□□□□□ -0.43
CCDC43-203ENST00000588210 FGF12P61328 243 aa12.37□□□□□ -0.43
CCDC43-203ENST00000588210 ZNF266Q14584 549 aa12.37□□□□□ -0.43
CCDC43-203ENST00000588210 TBC1D26Q86UD7 250 aa12.37□□□□□ -0.43
CCDC43-203ENST00000588210 OR8G5Q8NG78 346 aa12.37□□□□□ -0.43
CCDC43-203ENST00000588210 OR56B2PQ8NGI1 322 aa12.37□□□□□ -0.43
CCDC43-203ENST00000588210 EIF5A2Q9GZV4 153 aaKnown RBP12.37□□□□□ -0.43
CCDC43-203ENST00000588210 Q9N2K0 584 aa12.37□□□□□ -0.43
CCDC43-203ENST00000588210 NGBQ9NPG2 151 aa12.37□□□□□ -0.43
CCDC43-203ENST00000588210 C1orf196B1AJZ1 125 aa12.36□□□□□ -0.43
CCDC43-203ENST00000588210 MT-ND4LP03901 98 aa12.36□□□□□ -0.43
CCDC43-203ENST00000588210 HOXB1P14653 301 aaPredicted RBP12.36□□□□□ -0.43
CCDC43-203ENST00000588210 BCL3P20749 454 aa12.36□□□□□ -0.43
CCDC43-203ENST00000588210 NKX2-1P43699 371 aaPredicted RBP12.36□□□□□ -0.43
CCDC43-203ENST00000588210 ARF1P84077 181 aaKnown RBP12.36□□□□□ -0.43
CCDC43-203ENST00000588210 TLE4Q04727 773 aa12.36□□□□□ -0.43
CCDC43-203ENST00000588210 AKIRIN2Q53H80 203 aa12.36□□□□□ -0.43
CCDC43-203ENST00000588210 BCL2L2Q92843 193 aaPredicted RBP12.36□□□□□ -0.43
CCDC43-203ENST00000588210 REPIN1Q9BWE0 567 aaKnown RBP12.36□□□□□ -0.43
CCDC43-203ENST00000588210 PAPOLGQ9BWT3 736 aaKnown RBP12.36□□□□□ -0.43
CCDC43-203ENST00000588210 OBP2BQ9NPH6 170 aa12.36□□□□□ -0.43
CCDC43-203ENST00000588210 CRYBG3Q68DQ2 2970 aa12.36□□□□□ -0.43
CCDC43-203ENST00000588210 IGSF23A1L1A6 192 aa12.36□□□□□ -0.43
CCDC43-203ENST00000588210 TK1P04183 234 aa12.36□□□□□ -0.43
CCDC43-203ENST00000588210 ZNF44P15621 663 aa12.36□□□□□ -0.43
CCDC43-203ENST00000588210 AKR1C3P42330 323 aa12.36□□□□□ -0.43
CCDC43-203ENST00000588210 MEOX2P50222 304 aa12.36□□□□□ -0.43
CCDC43-203ENST00000588210 CTAG1AP78358 180 aa12.36□□□□□ -0.43
CCDC43-203ENST00000588210 PRDX4Q13162 271 aa12.36□□□□□ -0.43
CCDC43-203ENST00000588210 RHEBQ15382 184 aa12.36□□□□□ -0.43
CCDC43-203ENST00000588210 MPV17LQ2QL34 196 aa12.36□□□□□ -0.43
CCDC43-203ENST00000588210 TMEM182Q6ZP80 229 aaPredicted RBP12.36□□□□□ -0.43
CCDC43-203ENST00000588210 WFDC8Q8IUA0 241 aa12.36□□□□□ -0.43
CCDC43-203ENST00000588210 ZNF695Q8IW36 515 aa12.36□□□□□ -0.43
CCDC43-203ENST00000588210 SELENOHQ8IZQ5 122 aaKnown RBP12.36□□□□□ -0.43
CCDC43-203ENST00000588210 FGF23Q9GZV9 251 aaPredicted RBP12.36□□□□□ -0.43
CCDC43-203ENST00000588210 SMDT1Q9H4I9 107 aa12.36□□□□□ -0.43
CCDC43-203ENST00000588210 UBE2J1Q9Y385 318 aaPredicted RBP12.36□□□□□ -0.43
CCDC43-203ENST00000588210 SLC25A15Q9Y619 301 aa12.36□□□□□ -0.43
CCDC43-203ENST00000588210 FAM24AA6NFZ4 105 aa12.35□□□□□ -0.43
CCDC43-203ENST00000588210 UMAD1C9J7I0 102 aa12.35□□□□□ -0.43
CCDC43-203ENST00000588210 TUSC2O75896 110 aa12.35□□□□□ -0.43
CCDC43-203ENST00000588210 SNRNP70P08621 437 aaKnown RBP12.35□□□□□ -0.43
CCDC43-203ENST00000588210 BATF2Q8N1L9 274 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms