RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 LPAR3Q9UBY5 353 aa9.31□□□□□ -0.92
VMP1-207ENST00000588131 ZNF69Q9UC07 566 aa9.31□□□□□ -0.92
VMP1-207ENST00000588131 RPUSD1Q9UJJ7 312 aaKnown RBP9.31□□□□□ -0.92
VMP1-207ENST00000588131 AKAP6Q13023 2319 aa9.31□□□□□ -0.92
VMP1-207ENST00000588131 A0A0B4J293 547 aa9.3□□□□□ -0.92
VMP1-207ENST00000588131 IGKV1D-13A0A0B4J2D9 117 aa9.3□□□□□ -0.92
VMP1-207ENST00000588131 INMT-MINDY4F8WBC2 141 aa9.3□□□□□ -0.92
VMP1-207ENST00000588131 HSPA12AO43301 675 aa9.3□□□□□ -0.92
VMP1-207ENST00000588131 DIRAS3O95661 229 aa9.3□□□□□ -0.92
VMP1-207ENST00000588131 HEXAP06865 529 aa9.3□□□□□ -0.92
VMP1-207ENST00000588131 IGKV1-13P0DP09 117 aa9.3□□□□□ -0.92
VMP1-207ENST00000588131 ANXA7P20073 488 aaKnown RBP9.3□□□□□ -0.92
VMP1-207ENST00000588131 ZBTB25P24278 435 aa9.3□□□□□ -0.92
VMP1-207ENST00000588131 FPR2P25090 351 aa9.3□□□□□ -0.92
VMP1-207ENST00000588131 PPP1CCP36873 323 aaKnown RBP9.3□□□□□ -0.92
VMP1-207ENST00000588131 CEACAM6P40199 344 aa9.3□□□□□ -0.92
VMP1-207ENST00000588131 LOXL3P58215 753 aa9.3□□□□□ -0.92
VMP1-207ENST00000588131 HERV-K104P61576 105 aa9.3□□□□□ -0.92
VMP1-207ENST00000588131 HTD2P86397 168 aa9.3□□□□□ -0.92
VMP1-207ENST00000588131 BAMBIQ13145 260 aa9.3□□□□□ -0.92
VMP1-207ENST00000588131 ESCO2Q56NI9 601 aa9.3□□□□□ -0.92
VMP1-207ENST00000588131 KIAA2026Q5HYC2 2103 aa9.3□□□□□ -0.92
VMP1-207ENST00000588131 ZDHHC22Q8N966 263 aa9.3□□□□□ -0.92
VMP1-207ENST00000588131 NINJ1Q92982 152 aa9.3□□□□□ -0.92
VMP1-207ENST00000588131 TOMM40LQ969M1 308 aa9.3□□□□□ -0.92
VMP1-207ENST00000588131 MOB3AQ96BX8 217 aa9.3□□□□□ -0.92
VMP1-207ENST00000588131 SLC25A21Q9BQT8 299 aaPredicted RBP9.3□□□□□ -0.92
VMP1-207ENST00000588131 GAL3ST2Q9H3Q3 398 aa9.3□□□□□ -0.92
VMP1-207ENST00000588131 LINC00574Q9H8X3 128 aa9.3□□□□□ -0.92
VMP1-207ENST00000588131 OR2S2Q9NQN1 319 aa9.3□□□□□ -0.92
VMP1-207ENST00000588131 GPR132Q9UNW8 380 aa9.3□□□□□ -0.92
VMP1-207ENST00000588131 NBPF19A0A087WUL8 3843 aa9.3□□□□□ -0.92
VMP1-207ENST00000588131 hCG_2014768A0A024R1R8 64 aa9.29□□□□□ -0.92
VMP1-207ENST00000588131 LOC105371242A0A075B767 164 aa9.29□□□□□ -0.92
VMP1-207ENST00000588131 PPIAL4CA0A0B4J2A2 164 aa9.29□□□□□ -0.92
VMP1-207ENST00000588131 FAM172BPA6NC97 362 aa9.29□□□□□ -0.92
VMP1-207ENST00000588131 A8MXK9 166 aa9.29□□□□□ -0.92
VMP1-207ENST00000588131 RLN1P04808 185 aa9.29□□□□□ -0.92
VMP1-207ENST00000588131 ZNF728P0DKX0 622 aa9.29□□□□□ -0.92
VMP1-207ENST00000588131 PPIAL4GP0DN37 164 aa9.29□□□□□ -0.92
VMP1-207ENST00000588131 VSIG10L2P0DP72 767 aa9.29□□□□□ -0.92
VMP1-207ENST00000588131 PGAM2P15259 253 aa9.29□□□□□ -0.92
VMP1-207ENST00000588131 PI3P19957 117 aa9.29□□□□□ -0.92
VMP1-207ENST00000588131 TMED4Q7Z7H5 227 aa9.29□□□□□ -0.92
VMP1-207ENST00000588131 KRTAP1-3Q8IUG1 177 aa9.29□□□□□ -0.92
VMP1-207ENST00000588131 C11orf42Q8N5U0 333 aa9.29□□□□□ -0.92
VMP1-207ENST00000588131 ADAD2Q8NCV1 583 aaKnown RBP9.29□□□□□ -0.92
VMP1-207ENST00000588131 LEAP2Q969E1 77 aa9.29□□□□□ -0.92
VMP1-207ENST00000588131 RAB39BQ96DA2 213 aa9.29□□□□□ -0.92
VMP1-207ENST00000588131 TOLLIPQ9H0E2 274 aa9.29□□□□□ -0.92
VMP1-207ENST00000588131 C5orf66Q9H5L9 145 aa9.29□□□□□ -0.92
VMP1-207ENST00000588131 GFOD1Q9NXC2 390 aa9.29□□□□□ -0.92
VMP1-207ENST00000588131 GNG12Q9UBI6 72 aa9.29□□□□□ -0.92
VMP1-207ENST00000588131 JPT1Q9UK76 154 aa9.29□□□□□ -0.92
VMP1-207ENST00000588131 OR2W1Q9Y3N9 320 aa9.29□□□□□ -0.92
VMP1-207ENST00000588131 A0A096LNT2 108 aa9.28□□□□□ -0.92
VMP1-207ENST00000588131 C17orf98A8MV24 154 aa9.28□□□□□ -0.92
VMP1-207ENST00000588131 FAM157AC9JC47 383 aa9.28□□□□□ -0.92
VMP1-207ENST00000588131 SLC31A2O15432 143 aa9.28□□□□□ -0.92
VMP1-207ENST00000588131 YPEL1O60688 119 aa9.28□□□□□ -0.92
VMP1-207ENST00000588131 PEX14O75381 377 aa9.28□□□□□ -0.92
VMP1-207ENST00000588131 IGHV3-7P01780 117 aa9.28□□□□□ -0.92
VMP1-207ENST00000588131 SLC25A16P16260 332 aa9.28□□□□□ -0.92
VMP1-207ENST00000588131 NFYBP25208 207 aa9.28□□□□□ -0.92
VMP1-207ENST00000588131 MECP2P51608 486 aaKnown RBP9.28□□□□□ -0.92
VMP1-207ENST00000588131 UCP3P55916 312 aa9.28□□□□□ -0.92
VMP1-207ENST00000588131 LCN2P80188 198 aa9.28□□□□□ -0.92
VMP1-207ENST00000588131 SURF2Q15527 256 aaPredicted RBP9.28□□□□□ -0.92
VMP1-207ENST00000588131 MORN2Q502X0 79 aa9.28□□□□□ -0.92
VMP1-207ENST00000588131 Q5PR19 223 aa9.28□□□□□ -0.92
VMP1-207ENST00000588131 CD276Q5ZPR3 534 aa9.28□□□□□ -0.92
VMP1-207ENST00000588131 HEPN1Q6WQI6 88 aa9.28□□□□□ -0.92
VMP1-207ENST00000588131 SECTM1Q8WVN6 248 aa9.28□□□□□ -0.92
VMP1-207ENST00000588131 CAPSLQ8WWF8 208 aa9.28□□□□□ -0.92
VMP1-207ENST00000588131 TMEM230Q96A57 120 aa9.28□□□□□ -0.92
VMP1-207ENST00000588131 DACT3Q96B18 629 aaPredicted RBP9.28□□□□□ -0.92
VMP1-207ENST00000588131 YPEL2Q96QA6 119 aa9.28□□□□□ -0.92
VMP1-207ENST00000588131 RTBDNQ9BSG5 229 aaPredicted RBP9.28□□□□□ -0.92
VMP1-207ENST00000588131 RAB9BQ9NP90 201 aa9.28□□□□□ -0.92
VMP1-207ENST00000588131 CCL28Q9NRJ3 127 aa9.28□□□□□ -0.92
VMP1-207ENST00000588131 ZNF221Q9UK13 617 aa9.28□□□□□ -0.92
VMP1-207ENST00000588131 A0A1W2PPE3 182 aa9.27□□□□□ -0.93
VMP1-207ENST00000588131 HSD17B6O14756 317 aa9.27□□□□□ -0.93
VMP1-207ENST00000588131 ST8SIA5O15466 376 aa9.27□□□□□ -0.93
VMP1-207ENST00000588131 LIPFP07098 398 aa9.27□□□□□ -0.93
VMP1-207ENST00000588131 CTSDP07339 412 aaPredicted RBP9.27□□□□□ -0.93
VMP1-207ENST00000588131 OR8U9P0C7N5 309 aa9.27□□□□□ -0.93
VMP1-207ENST00000588131 ECI1P42126 302 aa9.27□□□□□ -0.93
VMP1-207ENST00000588131 LUMP51884 338 aaPredicted RBP9.27□□□□□ -0.93
VMP1-207ENST00000588131 RAG2P55895 527 aa9.27□□□□□ -0.93
VMP1-207ENST00000588131 DLX1P56177 255 aa9.27□□□□□ -0.93
VMP1-207ENST00000588131 PAX2Q02962 417 aa9.27□□□□□ -0.93
VMP1-207ENST00000588131 PRB3Q04118 309 aaPredicted RBP9.27□□□□□ -0.93
VMP1-207ENST00000588131 TATDN3Q17R31 274 aa9.27□□□□□ -0.93
VMP1-207ENST00000588131 TMEM30BQ3MIR4 351 aa9.27□□□□□ -0.93
VMP1-207ENST00000588131 ZNF439Q8NDP4 499 aa9.27□□□□□ -0.93
VMP1-207ENST00000588131 OR10A7Q8NGE5 316 aa9.27□□□□□ -0.93
VMP1-207ENST00000588131 OR52M1Q8NGK5 317 aa9.27□□□□□ -0.93
VMP1-207ENST00000588131 OR8U1Q8NH10 309 aa9.27□□□□□ -0.93
VMP1-207ENST00000588131 SEC22CQ9BRL7 303 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms