RNA–Protein interactions for RNA: ENST00000586495.1

TRIM47-203, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 605 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-203ENST00000586495 OR2S2Q9NQN1 319 aa13.4□□□□□ -0.26
TRIM47-203ENST00000586495 MBNL3Q9NUK0 354 aaKnown RBP13.4□□□□□ -0.26
TRIM47-203ENST00000586495 NUDT19A8MXV4 375 aa13.39□□□□□ -0.27
TRIM47-203ENST00000586495 H0YHG0 523 aa13.39□□□□□ -0.27
TRIM47-203ENST00000586495 SLC31A2O15432 143 aa13.39□□□□□ -0.27
TRIM47-203ENST00000586495 MPIG6BO95866 241 aa13.39□□□□□ -0.27
TRIM47-203ENST00000586495 CDK1P06493 297 aa13.39□□□□□ -0.27
TRIM47-203ENST00000586495 GPR12P47775 334 aa13.39□□□□□ -0.27
TRIM47-203ENST00000586495 THBS3P49746 956 aa13.39□□□□□ -0.27
TRIM47-203ENST00000586495 CT45A1Q5HYN5 189 aa13.39□□□□□ -0.27
TRIM47-203ENST00000586495 SIGIRRQ6IA17 410 aa13.39□□□□□ -0.27
TRIM47-203ENST00000586495 TEX38Q6PEX7 206 aa13.39□□□□□ -0.27
TRIM47-203ENST00000586495 UNQ9370/PRO34162Q6UXP9 181 aa13.39□□□□□ -0.27
TRIM47-203ENST00000586495 LINC00482Q8N8I6 264 aa13.39□□□□□ -0.27
TRIM47-203ENST00000586495 CT45A3Q8NHU0 189 aa13.39□□□□□ -0.27
TRIM47-203ENST00000586495 DPF1Q92782 380 aa13.39□□□□□ -0.27
TRIM47-203ENST00000586495 FAM46BQ96A09 425 aa13.39□□□□□ -0.27
TRIM47-203ENST00000586495 NEDD4LQ96PU5 975 aa13.39□□□□□ -0.27
TRIM47-203ENST00000586495 SCN3BQ9NY72 215 aa13.39□□□□□ -0.27
TRIM47-203ENST00000586495 PTGES3LE9PB15 166 aa13.38□□□□□ -0.27
TRIM47-203ENST00000586495 LANCL1O43813 399 aa13.38□□□□□ -0.27
TRIM47-203ENST00000586495 RRP9O43818 475 aaKnown RBP13.38□□□□□ -0.27
TRIM47-203ENST00000586495 MYCNOSP40205 109 aa13.38□□□□□ -0.27
TRIM47-203ENST00000586495 VHLP40337 213 aa13.38□□□□□ -0.27
TRIM47-203ENST00000586495 ZNF134P52741 427 aa13.38□□□□□ -0.27
TRIM47-203ENST00000586495 PNLIPRP3Q17RR3 467 aa13.38□□□□□ -0.27
TRIM47-203ENST00000586495 MORN2Q502X0 79 aa13.38□□□□□ -0.27
TRIM47-203ENST00000586495 MRPL41Q8IXM3 137 aaKnown RBP13.38□□□□□ -0.27
TRIM47-203ENST00000586495 PHYHIPQ92561 330 aa13.38□□□□□ -0.27
TRIM47-203ENST00000586495 S1PR3Q99500 378 aa13.38□□□□□ -0.27
TRIM47-203ENST00000586495 MCRIP2Q9BUT9 160 aaKnown RBP13.38□□□□□ -0.27
TRIM47-203ENST00000586495 DCLRE1BQ9H816 532 aa13.38□□□□□ -0.27
TRIM47-203ENST00000586495 JPT1Q9UK76 154 aa13.38□□□□□ -0.27
TRIM47-203ENST00000586495 LRRC42Q9Y546 428 aa13.38□□□□□ -0.27
TRIM47-203ENST00000586495 LINC01548A6NM66 108 aa13.37□□□□□ -0.27
TRIM47-203ENST00000586495 RGS11O94810 467 aa13.37□□□□□ -0.27
TRIM47-203ENST00000586495 HTD2P86397 168 aa13.37□□□□□ -0.27
TRIM47-203ENST00000586495 SPHARQ15513 63 aa13.37□□□□□ -0.27
TRIM47-203ENST00000586495 NKAPLQ5M9Q1 402 aa13.37□□□□□ -0.27
TRIM47-203ENST00000586495 RBM48Q5RL73 367 aaKnown RBP13.37□□□□□ -0.27
TRIM47-203ENST00000586495 C6orf141Q5SZD1 244 aa13.37□□□□□ -0.27
TRIM47-203ENST00000586495 ETV3LQ6ZN32 361 aa13.37□□□□□ -0.27
TRIM47-203ENST00000586495 C8orf86Q6ZUL3 223 aa13.37□□□□□ -0.27
TRIM47-203ENST00000586495 KLHL30-AS1Q8NEE0 82 aa13.37□□□□□ -0.27
TRIM47-203ENST00000586495 GALMQ96C23 342 aa13.37□□□□□ -0.27
TRIM47-203ENST00000586495 TMED9Q9BVK6 235 aa13.37□□□□□ -0.27
TRIM47-203ENST00000586495 PLSCR3Q9NRY6 295 aa13.37□□□□□ -0.27
TRIM47-203ENST00000586495 ZNF736B4DX44 427 aaPredicted RBP13.36□□□□□ -0.27
TRIM47-203ENST00000586495 YPEL1O60688 119 aa13.36□□□□□ -0.27
TRIM47-203ENST00000586495 INSL4Q14641 139 aa13.36□□□□□ -0.27
TRIM47-203ENST00000586495 MED22Q15528 200 aa13.36□□□□□ -0.27
TRIM47-203ENST00000586495 HSD17B12Q53GQ0 312 aa13.36□□□□□ -0.27
TRIM47-203ENST00000586495 CXorf66Q5JRM2 361 aaPredicted RBP13.36□□□□□ -0.27
TRIM47-203ENST00000586495 C1orf100Q5SVJ3 147 aa13.36□□□□□ -0.27
TRIM47-203ENST00000586495 LRRTM1Q86UE6 522 aa13.36□□□□□ -0.27
TRIM47-203ENST00000586495 ZNF695Q8IW36 515 aa13.36□□□□□ -0.27
TRIM47-203ENST00000586495 OR52L2PQ8NGH6 319 aa13.36□□□□□ -0.27
TRIM47-203ENST00000586495 KCNG3Q8TAE7 436 aa13.36□□□□□ -0.27
TRIM47-203ENST00000586495 MRPL30Q8TCC3 161 aaKnown RBP13.36□□□□□ -0.27
TRIM47-203ENST00000586495 YPEL2Q96QA6 119 aa13.36□□□□□ -0.27
TRIM47-203ENST00000586495 ABHD14AQ9BUJ0 271 aa13.36□□□□□ -0.27
TRIM47-203ENST00000586495 TMEM59Q9BXS4 323 aa13.36□□□□□ -0.27
TRIM47-203ENST00000586495 ELANEP08246 267 aa13.35□□□□□ -0.27
TRIM47-203ENST00000586495 VSIG8P0DPA2 414 aa13.35□□□□□ -0.27
TRIM47-203ENST00000586495 SRMP19623 302 aa13.35□□□□□ -0.27
TRIM47-203ENST00000586495 VDAC1P21796 283 aa13.35□□□□□ -0.27
TRIM47-203ENST00000586495 SOX6P35712 828 aa13.35□□□□□ -0.27
TRIM47-203ENST00000586495 GP2P55259 537 aaKnown RBP13.35□□□□□ -0.27
TRIM47-203ENST00000586495 RPS27AP62979 156 aaKnown RBP13.35□□□□□ -0.27
TRIM47-203ENST00000586495 LSAMPQ13449 338 aa13.35□□□□□ -0.27
TRIM47-203ENST00000586495 LY6G6FQ5SQ64 297 aa13.35□□□□□ -0.27
TRIM47-203ENST00000586495 FAM27D1Q5T7N8 215 aa13.35□□□□□ -0.27
TRIM47-203ENST00000586495 CEACAM19Q7Z692 300 aa13.35□□□□□ -0.27
TRIM47-203ENST00000586495 FAM71E2Q8N5Q1 922 aa13.35□□□□□ -0.27
TRIM47-203ENST00000586495 ABRACLQ9P1F3 81 aa13.35□□□□□ -0.27
TRIM47-203ENST00000586495 TPRKBQ9Y3C4 175 aa13.35□□□□□ -0.27
TRIM47-203ENST00000586495 CHATP28329 748 aa13.34□□□□□ -0.27
TRIM47-203ENST00000586495 HTR2CP28335 458 aa13.34□□□□□ -0.27
TRIM47-203ENST00000586495 PPP1CCP36873 323 aaKnown RBP13.34□□□□□ -0.27
TRIM47-203ENST00000586495 F2RL1P55085 397 aa13.34□□□□□ -0.27
TRIM47-203ENST00000586495 EGFEM1PQ0D2K5 195 aa13.34□□□□□ -0.27
TRIM47-203ENST00000586495 FOXE3Q13461 319 aa13.34□□□□□ -0.27
TRIM47-203ENST00000586495 MMDQ15546 238 aa13.34□□□□□ -0.27
TRIM47-203ENST00000586495 OR10K2Q6IF99 312 aa13.34□□□□□ -0.27
TRIM47-203ENST00000586495 C18orf65Q6ZTR6 163 aa13.34□□□□□ -0.27
TRIM47-203ENST00000586495 UFD1Q92890 307 aa13.34□□□□□ -0.27
TRIM47-203ENST00000586495 P2RX4Q99571 388 aa13.34□□□□□ -0.27
TRIM47-203ENST00000586495 SULT4A1Q9BR01 284 aa13.34□□□□□ -0.27
TRIM47-203ENST00000586495 CHCHD6Q9BRQ6 235 aa13.34□□□□□ -0.27
TRIM47-203ENST00000586495 TM2D1Q9BX74 207 aa13.34□□□□□ -0.27
TRIM47-203ENST00000586495 ZMAT5Q9UDW3 170 aaKnown RBP13.34□□□□□ -0.27
TRIM47-203ENST00000586495 LSM2Q9Y333 95 aaKnown RBP13.34□□□□□ -0.27
TRIM47-203ENST00000586495 ANKRD65E5RJM6 399 aa13.33□□□□□ -0.28
TRIM47-203ENST00000586495 K7EIL1 84 aa13.33□□□□□ -0.28
TRIM47-203ENST00000586495 UCHL1P09936 223 aa13.33□□□□□ -0.28
TRIM47-203ENST00000586495 OR5H8P0DN80 308 aa13.33□□□□□ -0.28
TRIM47-203ENST00000586495 CDX1P47902 265 aaPredicted RBP13.33□□□□□ -0.28
TRIM47-203ENST00000586495 GNMTQ14749 295 aa13.33□□□□□ -0.28
TRIM47-203ENST00000586495 HMGN3Q15651 99 aa13.33□□□□□ -0.28
TRIM47-203ENST00000586495 DEFB121Q5J5C9 76 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms