RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 TEX36Q5VZQ5 186 aa8.69□□□□□ -1.02
LIG3-203ENST00000585370 ADAM5Q6NVV9 412 aa8.69□□□□□ -1.02
LIG3-203ENST00000585370 TMEM65Q6PI78 240 aa8.69□□□□□ -1.02
LIG3-203ENST00000585370 LGI3Q8N145 548 aa8.69□□□□□ -1.02
LIG3-203ENST00000585370 C9orf62Q8N4C0 152 aa8.69□□□□□ -1.02
LIG3-203ENST00000585370 CD177Q8N6Q3 437 aa8.69□□□□□ -1.02
LIG3-203ENST00000585370 ASCC1Q8N9N2 400 aaKnown RBP8.69□□□□□ -1.02
LIG3-203ENST00000585370 ZBTB34Q8NCN2 500 aa8.69□□□□□ -1.02
LIG3-203ENST00000585370 ANGPTL6Q8NI99 470 aa8.69□□□□□ -1.02
LIG3-203ENST00000585370 SDSLQ96GA7 329 aa8.69□□□□□ -1.02
LIG3-203ENST00000585370 AKR1E2Q96JD6 320 aa8.69□□□□□ -1.02
LIG3-203ENST00000585370 TMEM246Q9BRR3 403 aa8.69□□□□□ -1.02
LIG3-203ENST00000585370 TAF9BQ9HBM6 251 aa8.69□□□□□ -1.02
LIG3-203ENST00000585370 SLC2A9Q9NRM0 540 aa8.69□□□□□ -1.02
LIG3-203ENST00000585370 HSPB11Q9Y547 144 aa8.69□□□□□ -1.02
LIG3-203ENST00000585370 ABCA2Q9BZC7 2435 aa8.68□□□□□ -1.02
LIG3-203ENST00000585370 IGKV1D-17A0A075B6S4 117 aa8.68□□□□□ -1.02
LIG3-203ENST00000585370 IGKV1-6A0A0C4DH72 117 aa8.68□□□□□ -1.02
LIG3-203ENST00000585370 DUXBA0A1W2PPF3 345 aa8.68□□□□□ -1.02
LIG3-203ENST00000585370 LGALS8O00214 317 aa8.68□□□□□ -1.02
LIG3-203ENST00000585370 SPINT2O43291 252 aa8.68□□□□□ -1.02
LIG3-203ENST00000585370 SIX6O95475 246 aa8.68□□□□□ -1.02
LIG3-203ENST00000585370 EGR1P18146 543 aa8.68□□□□□ -1.02
LIG3-203ENST00000585370 GNRHRP30968 328 aa8.68□□□□□ -1.02
LIG3-203ENST00000585370 IL2RGP31785 369 aa8.68□□□□□ -1.02
LIG3-203ENST00000585370 GABRA2P47869 451 aa8.68□□□□□ -1.02
LIG3-203ENST00000585370 TMEM187Q14656 261 aa8.68□□□□□ -1.02
LIG3-203ENST00000585370 ESCO2Q56NI9 601 aa8.68□□□□□ -1.02
LIG3-203ENST00000585370 DCAF12L2Q5VW00 463 aa8.68□□□□□ -1.02
LIG3-203ENST00000585370 LAMTOR1Q6IAA8 161 aa8.68□□□□□ -1.02
LIG3-203ENST00000585370 LDLRAD3Q86YD5 345 aa8.68□□□□□ -1.02
LIG3-203ENST00000585370 BOLLQ8N9W6 283 aaKnown RBP8.68□□□□□ -1.02
LIG3-203ENST00000585370 OR11H4Q8NGC9 324 aa8.68□□□□□ -1.02
LIG3-203ENST00000585370 OR10V1Q8NGI7 309 aa8.68□□□□□ -1.02
LIG3-203ENST00000585370 C2orf50Q96LR7 162 aa8.68□□□□□ -1.02
LIG3-203ENST00000585370 TMEM204Q9BSN7 226 aa8.68□□□□□ -1.02
LIG3-203ENST00000585370 SHARPINQ9H0F6 387 aa8.68□□□□□ -1.02
LIG3-203ENST00000585370 GSX1Q9H4S2 264 aaPredicted RBP8.68□□□□□ -1.02
LIG3-203ENST00000585370 ZNF665Q9H7R5 613 aa8.68□□□□□ -1.02
LIG3-203ENST00000585370 METTL8Q9H825 291 aaKnown RBP8.68□□□□□ -1.02
LIG3-203ENST00000585370 DYNLRB1Q9NP97 96 aa8.68□□□□□ -1.02
LIG3-203ENST00000585370 ZFP57Q9NU63 452 aa8.68□□□□□ -1.02
LIG3-203ENST00000585370 CISD1Q9NZ45 108 aaKnown RBP8.68□□□□□ -1.02
LIG3-203ENST00000585370 OR6C3Q9NZP0 311 aa8.68□□□□□ -1.02
LIG3-203ENST00000585370 KIF25Q9UIL4 384 aa8.68□□□□□ -1.02
LIG3-203ENST00000585370 C13orf42A0A1B0GVH6 325 aa8.67□□□□□ -1.02
LIG3-203ENST00000585370 FAM25EA8MYX2 175 aa8.67□□□□□ -1.02
LIG3-203ENST00000585370 G3V3Q6 166 aa8.67□□□□□ -1.02
LIG3-203ENST00000585370 NDUFA2O43678 99 aa8.67□□□□□ -1.02
LIG3-203ENST00000585370 FSTL3O95633 263 aa8.67□□□□□ -1.02
LIG3-203ENST00000585370 PSMB6P28072 239 aa8.67□□□□□ -1.02
LIG3-203ENST00000585370 CEACAM6P40199 344 aa8.67□□□□□ -1.02
LIG3-203ENST00000585370 CEBPDP49716 269 aaPredicted RBP8.67□□□□□ -1.02
LIG3-203ENST00000585370 HTD2P86397 168 aa8.67□□□□□ -1.02
LIG3-203ENST00000585370 AESQ08117 197 aa8.67□□□□□ -1.02
LIG3-203ENST00000585370 ANKRD55Q3KP44 614 aa8.67□□□□□ -1.02
LIG3-203ENST00000585370 TMEM30BQ3MIR4 351 aa8.67□□□□□ -1.02
LIG3-203ENST00000585370 LGALSLQ3ZCW2 172 aaPredicted RBP8.67□□□□□ -1.02
LIG3-203ENST00000585370 ZNF672Q499Z4 452 aaPredicted RBP8.67□□□□□ -1.02
LIG3-203ENST00000585370 LIAT1Q6ZQX7 453 aa8.67□□□□□ -1.02
LIG3-203ENST00000585370 BVESQ8NE79 360 aa8.67□□□□□ -1.02
LIG3-203ENST00000585370 THAP6Q8TBB0 222 aa8.67□□□□□ -1.02
LIG3-203ENST00000585370 SECTM1Q8WVN6 248 aa8.67□□□□□ -1.02
LIG3-203ENST00000585370 IL22RA2Q969J5 263 aa8.67□□□□□ -1.02
LIG3-203ENST00000585370 MBD6Q96DN6 1003 aa8.67□□□□□ -1.02
LIG3-203ENST00000585370 COQ2Q96H96 371 aa8.67□□□□□ -1.02
LIG3-203ENST00000585370 NSD1Q96L73 2696 aaPredicted RBP8.67□□□□□ -1.02
LIG3-203ENST00000585370 PLEKHF2Q9H8W4 249 aa8.67□□□□□ -1.02
LIG3-203ENST00000585370 SAP30LQ9HAJ7 183 aa8.67□□□□□ -1.02
LIG3-203ENST00000585370 CADP27708 2225 aa8.66□□□□□ -1.02
LIG3-203ENST00000585370 PPIAL4EA0A075B759 164 aa8.66□□□□□ -1.02
LIG3-203ENST00000585370 A0A0D9SG52 128 aa8.66□□□□□ -1.02
LIG3-203ENST00000585370 C3orf85A0A1B0GTC6 90 aa8.66□□□□□ -1.02
LIG3-203ENST00000585370 ODAMA1E959 279 aa8.66□□□□□ -1.02
LIG3-203ENST00000585370 NKX6-3A6NJ46 265 aa8.66□□□□□ -1.02
LIG3-203ENST00000585370 RNF212BA8MTL3 300 aa8.66□□□□□ -1.02
LIG3-203ENST00000585370 C12orf77C9JDV5 145 aa8.66□□□□□ -1.02
LIG3-203ENST00000585370 PPIAL4DF5H284 164 aa8.66□□□□□ -1.02
LIG3-203ENST00000585370 L7N2F9 121 aa8.66□□□□□ -1.02
LIG3-203ENST00000585370 PET100P0DJ07 73 aa8.66□□□□□ -1.02
LIG3-203ENST00000585370 PPIAL4FP0DN26 164 aa8.66□□□□□ -1.02
LIG3-203ENST00000585370 RPA2P15927 270 aa8.66□□□□□ -1.02
LIG3-203ENST00000585370 P2RX3P56373 397 aa8.66□□□□□ -1.02
LIG3-203ENST00000585370 SNRPD2P62316 118 aaKnown RBP8.66□□□□□ -1.02
LIG3-203ENST00000585370 CCL8P80075 99 aa8.66□□□□□ -1.02
LIG3-203ENST00000585370 NDUFA5Q16718 116 aa8.66□□□□□ -1.02
LIG3-203ENST00000585370 SWI5Q1ZZU3 235 aa8.66□□□□□ -1.02
LIG3-203ENST00000585370 MST1LQ2TV78 715 aa8.66□□□□□ -1.02
LIG3-203ENST00000585370 PHLDA2Q53GA4 152 aa8.66□□□□□ -1.02
LIG3-203ENST00000585370 Q5BKY6 102 aa8.66□□□□□ -1.02
LIG3-203ENST00000585370 STUMQ69YW2 141 aa8.66□□□□□ -1.02
LIG3-203ENST00000585370 C11orf87Q6NUJ2 197 aa8.66□□□□□ -1.02
LIG3-203ENST00000585370 ZNF788Q6ZQV5 615 aa8.66□□□□□ -1.02
LIG3-203ENST00000585370 ZNF767PQ75MW2 155 aa8.66□□□□□ -1.02
LIG3-203ENST00000585370 ZNF546Q86UE3 836 aa8.66□□□□□ -1.02
LIG3-203ENST00000585370 GRPEL2Q8TAA5 225 aa8.66□□□□□ -1.02
LIG3-203ENST00000585370 IL1F10Q8WWZ1 152 aa8.66□□□□□ -1.02
LIG3-203ENST00000585370 SEC22AQ96IW7 307 aa8.66□□□□□ -1.02
LIG3-203ENST00000585370 RDH8Q9NYR8 311 aa8.66□□□□□ -1.02
LIG3-203ENST00000585370 UBE2J1Q9Y385 318 aaPredicted RBP8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms