RNA–Protein interactions for RNA: ENST00000585241.5

SS18-226, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 774 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-226ENST00000585241 A0A1B0GX30 115 aa13.25□□□□□ -0.29
SS18-226ENST00000585241 ITGB1BP1O14713 200 aa13.25□□□□□ -0.29
SS18-226ENST00000585241 YPEL1O60688 119 aa13.25□□□□□ -0.29
SS18-226ENST00000585241 NDUFB6O95139 128 aa13.25□□□□□ -0.29
SS18-226ENST00000585241 FCGR2CP31995 323 aa13.25□□□□□ -0.29
SS18-226ENST00000585241 TSPAN5P62079 268 aa13.25□□□□□ -0.29
SS18-226ENST00000585241 RBMS2Q15434 407 aaKnown RBP13.25□□□□□ -0.29
SS18-226ENST00000585241 AADACL3Q5VUY0 350 aa13.25□□□□□ -0.29
SS18-226ENST00000585241 C1orf122Q6ZSJ8 110 aa13.25□□□□□ -0.29
SS18-226ENST00000585241 MINDY2Q8NBR6 621 aa13.25□□□□□ -0.29
SS18-226ENST00000585241 OR52L2PQ8NGH6 319 aa13.25□□□□□ -0.29
SS18-226ENST00000585241 TERB2Q8NHR7 220 aa13.25□□□□□ -0.29
SS18-226ENST00000585241 CHPT1Q8WUD6 406 aa13.25□□□□□ -0.29
SS18-226ENST00000585241 MOB3AQ96BX8 217 aa13.25□□□□□ -0.29
SS18-226ENST00000585241 YPEL2Q96QA6 119 aa13.25□□□□□ -0.29
SS18-226ENST00000585241 SLC25A21Q9BQT8 299 aaPredicted RBP13.25□□□□□ -0.29
SS18-226ENST00000585241 GINS4Q9BRT9 223 aa13.25□□□□□ -0.29
SS18-226ENST00000585241 ZNF2Q9BSG1 426 aaPredicted RBP13.25□□□□□ -0.29
SS18-226ENST00000585241 DPAGT1Q9H3H5 408 aa13.25□□□□□ -0.29
SS18-226ENST00000585241 OCEL1Q9H607 264 aa13.25□□□□□ -0.29
SS18-226ENST00000585241 OR2S2Q9NQN1 319 aa13.25□□□□□ -0.29
SS18-226ENST00000585241 CREBBPQ92793 2442 aa13.25□□□□□ -0.29
SS18-226ENST00000585241 ARHGAP32A7KAX9 2087 aa13.24□□□□□ -0.29
SS18-226ENST00000585241 FAM240BA0A1B0GVZ2 78 aa13.24□□□□□ -0.29
SS18-226ENST00000585241 OR5H14A6NHG9 310 aa13.24□□□□□ -0.29
SS18-226ENST00000585241 MMP23AO75900 390 aa13.24□□□□□ -0.29
SS18-226ENST00000585241 PPYP01298 95 aa13.24□□□□□ -0.29
SS18-226ENST00000585241 IGHV1-8P0DP01 117 aa13.24□□□□□ -0.29
SS18-226ENST00000585241 NFYAP23511 347 aaPredicted RBP13.24□□□□□ -0.29
SS18-226ENST00000585241 OMGP23515 440 aa13.24□□□□□ -0.29
SS18-226ENST00000585241 ECI1P42126 302 aa13.24□□□□□ -0.29
SS18-226ENST00000585241 CCR6P51684 374 aa13.24□□□□□ -0.29
SS18-226ENST00000585241 LCN2P80188 198 aa13.24□□□□□ -0.29
SS18-226ENST00000585241 GNMTQ14749 295 aa13.24□□□□□ -0.29
SS18-226ENST00000585241 PRAMEF5Q5TYX0 476 aa13.24□□□□□ -0.29
SS18-226ENST00000585241 IDO2Q6ZQW0 420 aa13.24□□□□□ -0.29
SS18-226ENST00000585241 ENKURQ8TC29 256 aa13.24□□□□□ -0.29
SS18-226ENST00000585241 FXYD6Q9H0Q3 95 aa13.24□□□□□ -0.29
SS18-226ENST00000585241 UNKLQ9H9P5 680 aaKnown RBP13.24□□□□□ -0.29
SS18-226ENST00000585241 RDH8Q9NYR8 311 aa13.24□□□□□ -0.29
SS18-226ENST00000585241 ZNF69Q9UC07 566 aa13.24□□□□□ -0.29
SS18-226ENST00000585241 OR2W1Q9Y3N9 320 aa13.24□□□□□ -0.29
SS18-226ENST00000585241 KPTNQ9Y664 436 aa13.24□□□□□ -0.29
SS18-226ENST00000585241 SESN1Q9Y6P5 492 aa13.24□□□□□ -0.29
SS18-226ENST00000585241 RNF223E7ERA6 249 aa13.23□□□□□ -0.29
SS18-226ENST00000585241 HSPA12AO43301 675 aa13.23□□□□□ -0.29
SS18-226ENST00000585241 RGS11O94810 467 aa13.23□□□□□ -0.29
SS18-226ENST00000585241 TCRBP04435 133 aa13.23□□□□□ -0.29
SS18-226ENST00000585241 AADACP22760 399 aa13.23□□□□□ -0.29
SS18-226ENST00000585241 CD34P28906 385 aa13.23□□□□□ -0.29
SS18-226ENST00000585241 CEACAM6P40199 344 aa13.23□□□□□ -0.29
SS18-226ENST00000585241 UCP3P55916 312 aa13.23□□□□□ -0.29
SS18-226ENST00000585241 SURF2Q15527 256 aaPredicted RBP13.23□□□□□ -0.29
SS18-226ENST00000585241 SCGB2B2Q4G0G5 96 aa13.23□□□□□ -0.29
SS18-226ENST00000585241 MORN2Q502X0 79 aa13.23□□□□□ -0.29
SS18-226ENST00000585241 FAM53AQ6NSI3 398 aaPredicted RBP13.23□□□□□ -0.29
SS18-226ENST00000585241 Q8N7P7 452 aa13.23□□□□□ -0.29
SS18-226ENST00000585241 ZNF439Q8NDP4 499 aa13.23□□□□□ -0.29
SS18-226ENST00000585241 WFDC11Q8NEX6 87 aa13.23□□□□□ -0.29
SS18-226ENST00000585241 PARP12Q9H0J9 701 aaKnown RBP13.23□□□□□ -0.29
SS18-226ENST00000585241 GNG12Q9UBI6 72 aa13.23□□□□□ -0.29
SS18-226ENST00000585241 ASH1LQ9NR48 2969 aaKnown RBP13.23□□□□□ -0.29
SS18-226ENST00000585241 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.22□□□□□ -0.291e-8■■■■□ 23.5
SS18-226ENST00000585241 BAHCC1Q9P281 2608 aa13.22□□□□□ -0.29
SS18-226ENST00000585241 IGHV3-43A0A0B4J1X8 118 aa13.22□□□□□ -0.29
SS18-226ENST00000585241 hCG_1809904A0A1W2PP81 198 aa13.22□□□□□ -0.29
SS18-226ENST00000585241 A0A1W2PPE2 198 aa13.22□□□□□ -0.29
SS18-226ENST00000585241 A0A1W2PR64 198 aa13.22□□□□□ -0.29
SS18-226ENST00000585241 A0A1W2PRV1 198 aa13.22□□□□□ -0.29
SS18-226ENST00000585241 B4DSR2 109 aa13.22□□□□□ -0.29
SS18-226ENST00000585241 MSMBP08118 114 aa13.22□□□□□ -0.29
SS18-226ENST00000585241 IGHV3-43DP0DP04 118 aa13.22□□□□□ -0.29
SS18-226ENST00000585241 SPNP16150 400 aa13.22□□□□□ -0.29
SS18-226ENST00000585241 PPP1CCP36873 323 aaKnown RBP13.22□□□□□ -0.29
SS18-226ENST00000585241 ZDHHC22Q8N966 263 aa13.22□□□□□ -0.29
SS18-226ENST00000585241 C8orf31Q8N9H6 132 aa13.22□□□□□ -0.29
SS18-226ENST00000585241 ZNF596Q8TC21 504 aa13.22□□□□□ -0.29
SS18-226ENST00000585241 EDARADDQ8WWZ3 215 aa13.22□□□□□ -0.29
SS18-226ENST00000585241 TMPRSS13Q9BYE2 586 aa13.22□□□□□ -0.29
SS18-226ENST00000585241 SIRPDQ9H106 197 aa13.22□□□□□ -0.29
SS18-226ENST00000585241 MMP26Q9NRE1 261 aa13.22□□□□□ -0.29
SS18-226ENST00000585241 INSIG2Q9Y5U4 225 aa13.22□□□□□ -0.29
SS18-226ENST00000585241 NUBP2Q9Y5Y2 271 aa13.22□□□□□ -0.29
SS18-226ENST00000585241 CR1P17927 2039 aa13.22□□□□□ -0.29
SS18-226ENST00000585241 YLPM1P49750 1951 aaKnown RBP13.21□□□□□ -0.29
SS18-226ENST00000585241 IGKV1D-13A0A0B4J2D9 117 aa13.21□□□□□ -0.29
SS18-226ENST00000585241 IGKV1-13P0DP09 117 aa13.21□□□□□ -0.29
SS18-226ENST00000585241 MMP9P14780 707 aa13.21□□□□□ -0.29
SS18-226ENST00000585241 PRTN3P24158 256 aa13.21□□□□□ -0.29
SS18-226ENST00000585241 ERVFRD-1P60508 538 aa13.21□□□□□ -0.29
SS18-226ENST00000585241 HERV-K104P61576 105 aa13.21□□□□□ -0.29
SS18-226ENST00000585241 PAX8Q06710 450 aa13.21□□□□□ -0.29
SS18-226ENST00000585241 LTC4SQ16873 150 aa13.21□□□□□ -0.29
SS18-226ENST00000585241 UTF1Q5T230 341 aa13.21□□□□□ -0.29
SS18-226ENST00000585241 BTNL3Q6UXE8 466 aa13.21□□□□□ -0.29
SS18-226ENST00000585241 CCBE1Q6UXH8 406 aaPredicted RBP13.21□□□□□ -0.29
SS18-226ENST00000585241 GLCCI1Q86VQ1 547 aa13.21□□□□□ -0.29
SS18-226ENST00000585241 LDLRAD3Q86YD5 345 aa13.21□□□□□ -0.29
SS18-226ENST00000585241 CENPSQ8N2Z9 138 aa13.21□□□□□ -0.29
SS18-226ENST00000585241 OR10V1Q8NGI7 309 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms