RNA–Protein interactions for RNA: ENST00000584887.1

TOP3A-219, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-219ENST00000584887 C8orf4Q9NR00 106 aa16.06■□□□□ 0.16
TOP3A-219ENST00000584887 PLSCR3Q9NRY6 295 aa16.06■□□□□ 0.16
TOP3A-219ENST00000584887 KCNIP1Q9NZI2 227 aa16.06■□□□□ 0.16
TOP3A-219ENST00000584887 GNAO1P09471 354 aa16.05■□□□□ 0.16
TOP3A-219ENST00000584887 MYF6P23409 242 aa16.05■□□□□ 0.16
TOP3A-219ENST00000584887 ZNF134P52741 427 aa16.05■□□□□ 0.16
TOP3A-219ENST00000584887 CD69Q07108 199 aa16.05■□□□□ 0.16
TOP3A-219ENST00000584887 DOC2BQ14184 412 aa16.05■□□□□ 0.16
TOP3A-219ENST00000584887 GNMTQ14749 295 aa16.05■□□□□ 0.16
TOP3A-219ENST00000584887 Q96M66 194 aa16.05■□□□□ 0.16
TOP3A-219ENST00000584887 HSPB9Q9BQS6 159 aa16.05■□□□□ 0.16
TOP3A-219ENST00000584887 TAF9BQ9HBM6 251 aa16.05■□□□□ 0.16
TOP3A-219ENST00000584887 CNOT2Q9NZN8 540 aaKnown RBP16.05■□□□□ 0.16
TOP3A-219ENST00000584887 DNAH3Q8TD57 4116 aa16.04■□□□□ 0.16
TOP3A-219ENST00000584887 FAM90A10PA6NDY2 464 aa16.04■□□□□ 0.16
TOP3A-219ENST00000584887 FAM90A7PA6NKC0 464 aa16.04■□□□□ 0.16
TOP3A-219ENST00000584887 FAM90A23PA8MXZ1 464 aa16.04■□□□□ 0.16
TOP3A-219ENST00000584887 SLC2A2P11168 524 aaPredicted RBP16.04■□□□□ 0.16
TOP3A-219ENST00000584887 VDAC1P21796 283 aa16.04■□□□□ 0.16
TOP3A-219ENST00000584887 SOX6P35712 828 aa16.04■□□□□ 0.16
TOP3A-219ENST00000584887 F2RL1P55085 397 aa16.04■□□□□ 0.16
TOP3A-219ENST00000584887 WNT4P56705 351 aa16.04■□□□□ 0.16
TOP3A-219ENST00000584887 FOXE3Q13461 319 aa16.04■□□□□ 0.16
TOP3A-219ENST00000584887 CDH26Q8IXH8 852 aa16.04■□□□□ 0.16
TOP3A-219ENST00000584887 NKAIN3Q8N8D7 197 aa16.04■□□□□ 0.16
TOP3A-219ENST00000584887 BPIFB6Q8NFQ5 453 aa16.04■□□□□ 0.16
TOP3A-219ENST00000584887 OR8H1Q8NGG4 311 aa16.04■□□□□ 0.16
TOP3A-219ENST00000584887 OR52L2PQ8NGH6 319 aa16.04■□□□□ 0.16
TOP3A-219ENST00000584887 DCLRE1BQ9H816 532 aa16.04■□□□□ 0.16
TOP3A-219ENST00000584887 PSORS1C1Q9UIG5 152 aa16.04■□□□□ 0.16
TOP3A-219ENST00000584887 PDCD6O75340 191 aa16.03■□□□□ 0.16
TOP3A-219ENST00000584887 CA11O75493 328 aa16.03■□□□□ 0.16
TOP3A-219ENST00000584887 MAPK3P27361 379 aaPredicted RBP16.03■□□□□ 0.16
TOP3A-219ENST00000584887 PPP1CCP36873 323 aaKnown RBP16.03■□□□□ 0.16
TOP3A-219ENST00000584887 ZNF137PP52743 207 aa16.03■□□□□ 0.16
TOP3A-219ENST00000584887 LSAMPQ13449 338 aa16.03■□□□□ 0.16
TOP3A-219ENST00000584887 MMDQ15546 238 aa16.03■□□□□ 0.16
TOP3A-219ENST00000584887 SIGIRRQ6IA17 410 aa16.03■□□□□ 0.16
TOP3A-219ENST00000584887 C5orf24Q7Z6I8 188 aa16.03■□□□□ 0.16
TOP3A-219ENST00000584887 OR8U1Q8NH10 309 aa16.03■□□□□ 0.16
TOP3A-219ENST00000584887 ZNF107Q9UII5 783 aaPredicted RBP16.03■□□□□ 0.16
TOP3A-219ENST00000584887 H0YHG0 523 aa16.02■□□□□ 0.16
TOP3A-219ENST00000584887 LANCL1O43813 399 aa16.02■□□□□ 0.16
TOP3A-219ENST00000584887 LUMP51884 338 aaPredicted RBP16.02■□□□□ 0.16
TOP3A-219ENST00000584887 DGCR2P98153 550 aa16.02■□□□□ 0.16
TOP3A-219ENST00000584887 LAIR2Q6ISS4 152 aa16.02■□□□□ 0.16
TOP3A-219ENST00000584887 GAPTQ8N292 157 aa16.02■□□□□ 0.16
TOP3A-219ENST00000584887 FAM71E2Q8N5Q1 922 aa16.02■□□□□ 0.16
TOP3A-219ENST00000584887 THRSPQ92748 146 aa16.02■□□□□ 0.16
TOP3A-219ENST00000584887 UQCC2Q9BRT2 126 aa16.02■□□□□ 0.16
TOP3A-219ENST00000584887 ABHD14AQ9BUJ0 271 aa16.02■□□□□ 0.16
TOP3A-219ENST00000584887 MRPL20Q9BYC9 149 aaKnown RBP16.02■□□□□ 0.16
TOP3A-219ENST00000584887 CST11Q9H112 138 aa16.02■□□□□ 0.16
TOP3A-219ENST00000584887 SC5DO75845 299 aa16.01■□□□□ 0.15
TOP3A-219ENST00000584887 GLAP06280 429 aa16.01■□□□□ 0.15
TOP3A-219ENST00000584887 ELANEP08246 267 aa16.01■□□□□ 0.15
TOP3A-219ENST00000584887 INSL4Q14641 139 aa16.01■□□□□ 0.15
TOP3A-219ENST00000584887 MORN2Q502X0 79 aa16.01■□□□□ 0.15
TOP3A-219ENST00000584887 OR5M8Q8NGP6 311 aa16.01■□□□□ 0.15
TOP3A-219ENST00000584887 MRPL30Q8TCC3 161 aaKnown RBP16.01■□□□□ 0.15
TOP3A-219ENST00000584887 KCTD7Q96MP8 289 aa16.01■□□□□ 0.15
TOP3A-219ENST00000584887 NEDD4LQ96PU5 975 aa16.01■□□□□ 0.15
TOP3A-219ENST00000584887 ERGIC3Q9Y282 383 aa16.01■□□□□ 0.15
TOP3A-219ENST00000584887 CDX1P47902 265 aaPredicted RBP16■□□□□ 0.15
TOP3A-219ENST00000584887 GP2P55259 537 aaKnown RBP16■□□□□ 0.15
TOP3A-219ENST00000584887 GABPB1Q06547 395 aaPredicted RBP16■□□□□ 0.15
TOP3A-219ENST00000584887 DCTN2Q13561 401 aaKnown RBP16■□□□□ 0.15
TOP3A-219ENST00000584887 FAM27D1Q5T7N8 215 aa16■□□□□ 0.15
TOP3A-219ENST00000584887 STEAP3Q658P3 488 aa16■□□□□ 0.15
TOP3A-219ENST00000584887 OR10K2Q6IF99 312 aa16■□□□□ 0.15
TOP3A-219ENST00000584887 LYPD6Q86Y78 171 aa16■□□□□ 0.15
TOP3A-219ENST00000584887 NANOGP1Q8N7R0 232 aa16■□□□□ 0.15
TOP3A-219ENST00000584887 MBNL3Q9NUK0 354 aaKnown RBP16■□□□□ 0.15
TOP3A-219ENST00000584887 ZMAT5Q9UDW3 170 aaKnown RBP16■□□□□ 0.15
TOP3A-219ENST00000584887 JPT1Q9UK76 154 aa16■□□□□ 0.15
TOP3A-219ENST00000584887 IGHG4P01861 327 aa15.99■□□□□ 0.15
TOP3A-219ENST00000584887 CD1AP06126 327 aa15.99■□□□□ 0.15
TOP3A-219ENST00000584887 ACTBP60709 375 aa15.99■□□□□ 0.15
TOP3A-219ENST00000584887 CFHR3Q02985 330 aa15.99■□□□□ 0.15
TOP3A-219ENST00000584887 KIR2DS1Q14954 304 aa15.99■□□□□ 0.15
TOP3A-219ENST00000584887 ACSM3Q53FZ2 586 aa15.99■□□□□ 0.15
TOP3A-219ENST00000584887 RBM48Q5RL73 367 aaKnown RBP15.99■□□□□ 0.15
TOP3A-219ENST00000584887 B9D2Q9BPU9 175 aa15.99■□□□□ 0.15
TOP3A-219ENST00000584887 SULT4A1Q9BR01 284 aa15.99■□□□□ 0.15
TOP3A-219ENST00000584887 ZNF251Q9BRH9 671 aa15.99■□□□□ 0.15
TOP3A-219ENST00000584887 TMED9Q9BVK6 235 aa15.99■□□□□ 0.15
TOP3A-219ENST00000584887 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP15.99■□□□□ 0.15
TOP3A-219ENST00000584887 PLCXD1Q9NUJ7 323 aa15.99■□□□□ 0.15
TOP3A-219ENST00000584887 GHRLQ9UBU3 117 aa15.99■□□□□ 0.15
TOP3A-219ENST00000584887 WSB1Q9Y6I7 421 aa15.99■□□□□ 0.15
TOP3A-219ENST00000584887 RGS11O94810 467 aa15.98■□□□□ 0.15
TOP3A-219ENST00000584887 UBBP0CG47 229 aa15.98■□□□□ 0.15
TOP3A-219ENST00000584887 OR5H8P0DN80 308 aa15.98■□□□□ 0.15
TOP3A-219ENST00000584887 CNTFRP26992 372 aa15.98■□□□□ 0.15
TOP3A-219ENST00000584887 OR3A3P47888 321 aa15.98■□□□□ 0.15
TOP3A-219ENST00000584887 RNF152Q8N8N0 203 aa15.98■□□□□ 0.15
TOP3A-219ENST00000584887 SETD6Q8TBK2 473 aa15.98■□□□□ 0.15
TOP3A-219ENST00000584887 C4orf3Q8WVX3 66 aa15.98■□□□□ 0.15
TOP3A-219ENST00000584887 IL1F10Q8WWZ1 152 aa15.98■□□□□ 0.15
TOP3A-219ENST00000584887 GALMQ96C23 342 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms