RNA–Protein interactions for RNA: ENST00000584755.1

UBBP4-202, Transcript of ubiquitin B pseudogene 4, humanhuman

TSL 1 (best) BASIC

Gene UBBP4, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-202ENST00000584755 ZNF729A6NN14 1252 aaPredicted RBP11.57□□□□□ -0.56
UBBP4-202ENST00000584755 BOLA2-SMG1P6H3BVE0 249 aa11.57□□□□□ -0.56
UBBP4-202ENST00000584755 HSPA12AO43301 675 aa11.57□□□□□ -0.56
UBBP4-202ENST00000584755 HLA-GP17693 338 aa11.57□□□□□ -0.56
UBBP4-202ENST00000584755 VAMP1P23763 118 aa11.57□□□□□ -0.56
UBBP4-202ENST00000584755 CD83Q01151 205 aa11.57□□□□□ -0.56
UBBP4-202ENST00000584755 SGPP2Q8IWX5 399 aa11.57□□□□□ -0.56
UBBP4-202ENST00000584755 OR52L2PQ8NGH6 319 aa11.57□□□□□ -0.56
UBBP4-202ENST00000584755 OR10V1Q8NGI7 309 aa11.57□□□□□ -0.56
UBBP4-202ENST00000584755 GALNT14Q96FL9 552 aa11.57□□□□□ -0.56
UBBP4-202ENST00000584755 FYTTD1Q96QD9 318 aaKnown RBP11.57□□□□□ -0.56
UBBP4-202ENST00000584755 SLC5A7Q9GZV3 580 aa11.57□□□□□ -0.56
UBBP4-202ENST00000584755 TAS2R3Q9NYW6 316 aa11.57□□□□□ -0.56
UBBP4-202ENST00000584755 MGAT4CQ9UBM8 478 aa11.57□□□□□ -0.56
UBBP4-202ENST00000584755 LPAR3Q9UBY5 353 aa11.57□□□□□ -0.56
UBBP4-202ENST00000584755 CLN8Q9UBY8 286 aa11.57□□□□□ -0.56
UBBP4-202ENST00000584755 JPT1Q9UK76 154 aa11.57□□□□□ -0.56
UBBP4-202ENST00000584755 UBE2J1Q9Y385 318 aaPredicted RBP11.57□□□□□ -0.56
UBBP4-202ENST00000584755 LINC00312Q9Y6C7 94 aa11.57□□□□□ -0.56
UBBP4-202ENST00000584755 DCHS2Q6V1P9 2916 aa11.57□□□□□ -0.56
UBBP4-202ENST00000584755 hADV38S2A0JD32 116 aa11.57□□□□□ -0.56
UBBP4-202ENST00000584755 A8MV72 311 aaPredicted RBP11.57□□□□□ -0.56
UBBP4-202ENST00000584755 GPR31O00270 319 aa11.57□□□□□ -0.56
UBBP4-202ENST00000584755 DVL1O14640 695 aa11.57□□□□□ -0.56
UBBP4-202ENST00000584755 OR2A4O95047 310 aa11.57□□□□□ -0.56
UBBP4-202ENST00000584755 WNT2P09544 360 aa11.57□□□□□ -0.56
UBBP4-202ENST00000584755 NDUFB7P17568 137 aa11.57□□□□□ -0.56
UBBP4-202ENST00000584755 CD34P28906 385 aa11.57□□□□□ -0.56
UBBP4-202ENST00000584755 LUMP51884 338 aaPredicted RBP11.57□□□□□ -0.56
UBBP4-202ENST00000584755 LOXL3P58215 753 aa11.57□□□□□ -0.56
UBBP4-202ENST00000584755 MSMO1Q15800 293 aa11.57□□□□□ -0.56
UBBP4-202ENST00000584755 C2orf68Q2NKX9 166 aa11.57□□□□□ -0.56
UBBP4-202ENST00000584755 TMEM30BQ3MIR4 351 aa11.57□□□□□ -0.56
UBBP4-202ENST00000584755 ABCA11PQ4W5N1 156 aa11.57□□□□□ -0.56
UBBP4-202ENST00000584755 SP5Q6BEB4 398 aaPredicted RBP11.57□□□□□ -0.56
UBBP4-202ENST00000584755 ZNF841Q6ZN19 808 aa11.57□□□□□ -0.56
UBBP4-202ENST00000584755 ZNF818PQ6ZRF7 136 aa11.57□□□□□ -0.56
UBBP4-202ENST00000584755 CCDC71LQ8N9Z2 235 aa11.57□□□□□ -0.56
UBBP4-202ENST00000584755 BVESQ8NE79 360 aa11.57□□□□□ -0.56
UBBP4-202ENST00000584755 SECTM1Q8WVN6 248 aa11.57□□□□□ -0.56
UBBP4-202ENST00000584755 RTN4IP1Q8WWV3 396 aaPredicted RBP11.57□□□□□ -0.56
UBBP4-202ENST00000584755 RAB1CQ92928 201 aa11.57□□□□□ -0.56
UBBP4-202ENST00000584755 TIMD4Q96H15 378 aa11.57□□□□□ -0.56
UBBP4-202ENST00000584755 OR2A7Q96R45 310 aa11.57□□□□□ -0.56
UBBP4-202ENST00000584755 PHB2Q99623 299 aa11.57□□□□□ -0.56
UBBP4-202ENST00000584755 PARP12Q9H0J9 701 aaKnown RBP11.57□□□□□ -0.56
UBBP4-202ENST00000584755 NAA60Q9H7X0 242 aa11.57□□□□□ -0.56
UBBP4-202ENST00000584755 GPR37O15354 613 aa11.56□□□□□ -0.56
UBBP4-202ENST00000584755 YPEL1O60688 119 aa11.56□□□□□ -0.56
UBBP4-202ENST00000584755 NDUFS7O75251 213 aa11.56□□□□□ -0.56
UBBP4-202ENST00000584755 IGLV2-14P01704 120 aa11.56□□□□□ -0.56
UBBP4-202ENST00000584755 ANXA3P12429 323 aa11.56□□□□□ -0.56
UBBP4-202ENST00000584755 COX6B1P14854 86 aa11.56□□□□□ -0.56
UBBP4-202ENST00000584755 GNMTQ14749 295 aa11.56□□□□□ -0.56
UBBP4-202ENST00000584755 PHLDA2Q53GA4 152 aa11.56□□□□□ -0.56
UBBP4-202ENST00000584755 LY6G6FQ5SQ64 297 aa11.56□□□□□ -0.56
UBBP4-202ENST00000584755 C11orf88Q6PI97 169 aa11.56□□□□□ -0.56
UBBP4-202ENST00000584755 RFESDQ8TAC1 157 aa11.56□□□□□ -0.56
UBBP4-202ENST00000584755 NINJ1Q92982 152 aa11.56□□□□□ -0.56
UBBP4-202ENST00000584755 AKR1E2Q96JD6 320 aa11.56□□□□□ -0.56
UBBP4-202ENST00000584755 YPEL2Q96QA6 119 aa11.56□□□□□ -0.56
UBBP4-202ENST00000584755 ZNF436Q9C0F3 470 aaPredicted RBP11.56□□□□□ -0.56
UBBP4-202ENST00000584755 OR2S2Q9NQN1 319 aa11.56□□□□□ -0.56
UBBP4-202ENST00000584755 CCL28Q9NRJ3 127 aa11.56□□□□□ -0.56
UBBP4-202ENST00000584755 TRBV23-1A0A0A0MS06 115 aa11.55□□□□□ -0.56
UBBP4-202ENST00000584755 MEX3AA1L020 520 aaKnown RBP11.55□□□□□ -0.56
UBBP4-202ENST00000584755 J3QKU1 62 aa11.55□□□□□ -0.56
UBBP4-202ENST00000584755 ITGB1BP1O14713 200 aa11.55□□□□□ -0.56
UBBP4-202ENST00000584755 MPPED1O15442 326 aa11.55□□□□□ -0.56
UBBP4-202ENST00000584755 PPIHO43447 177 aaKnown RBP11.55□□□□□ -0.56
UBBP4-202ENST00000584755 IFNA2P01563 188 aa11.55□□□□□ -0.56
UBBP4-202ENST00000584755 PPP1CCP36873 323 aaKnown RBP11.55□□□□□ -0.56
UBBP4-202ENST00000584755 RPL31P62899 125 aaKnown RBP11.55□□□□□ -0.56
UBBP4-202ENST00000584755 ANKRD55Q3KP44 614 aa11.55□□□□□ -0.56
UBBP4-202ENST00000584755 AVPI1Q5T686 147 aa11.55□□□□□ -0.56
UBBP4-202ENST00000584755 FAM53AQ6NSI3 398 aaPredicted RBP11.55□□□□□ -0.56
UBBP4-202ENST00000584755 KCTD9Q7L273 389 aa11.55□□□□□ -0.56
UBBP4-202ENST00000584755 OR10A7Q8NGE5 316 aa11.55□□□□□ -0.56
UBBP4-202ENST00000584755 OR52M1Q8NGK5 317 aa11.55□□□□□ -0.56
UBBP4-202ENST00000584755 CASTOR1Q8WTX7 329 aa11.55□□□□□ -0.56
UBBP4-202ENST00000584755 ASB13Q8WXK3 278 aa11.55□□□□□ -0.56
UBBP4-202ENST00000584755 C19orf12Q9NSK7 152 aa11.55□□□□□ -0.56
UBBP4-202ENST00000584755 GFOD1Q9NXC2 390 aa11.55□□□□□ -0.56
UBBP4-202ENST00000584755 PIPOXQ9P0Z9 390 aa11.55□□□□□ -0.56
UBBP4-202ENST00000584755 MIOXQ9UGB7 285 aa11.55□□□□□ -0.56
UBBP4-202ENST00000584755 KCNIP3Q9Y2W7 256 aa11.55□□□□□ -0.56
UBBP4-202ENST00000584755 TEX13DA0A0J9YY54 714 aaPredicted RBP11.54□□□□□ -0.56
UBBP4-202ENST00000584755 F5H0A9 414 aaPredicted RBP11.54□□□□□ -0.56
UBBP4-202ENST00000584755 SLC22A5O76082 557 aa11.54□□□□□ -0.56
UBBP4-202ENST00000584755 GIPP09681 153 aaPredicted RBP11.54□□□□□ -0.56
UBBP4-202ENST00000584755 OR8U9P0C7N5 309 aa11.54□□□□□ -0.56
UBBP4-202ENST00000584755 H2BFSP57053 126 aa11.54□□□□□ -0.56
UBBP4-202ENST00000584755 SRSF4Q08170 494 aaKnown RBP11.54□□□□□ -0.56
UBBP4-202ENST00000584755 ZNF273Q14593 569 aa11.54□□□□□ -0.56
UBBP4-202ENST00000584755 TMEM187Q14656 261 aa11.54□□□□□ -0.56
UBBP4-202ENST00000584755 SLC9A3R2Q15599 337 aa11.54□□□□□ -0.56
UBBP4-202ENST00000584755 MORN2Q502X0 79 aa11.54□□□□□ -0.56
UBBP4-202ENST00000584755 TMEM200BQ69YZ2 307 aa11.54□□□□□ -0.56
UBBP4-202ENST00000584755 CMTM1Q8IZ96 169 aa11.54□□□□□ -0.56
UBBP4-202ENST00000584755 ZNF295-AS1Q8N0V1 137 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 174 ms