RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 GABARAPL2P60520 117 aa16.28■□□□□ 0.2
SS18-224ENST00000584083 EMX1Q04741 257 aaPredicted RBP16.28■□□□□ 0.2
SS18-224ENST00000584083 Q3ZCU0 254 aa16.28■□□□□ 0.2
SS18-224ENST00000584083 CENPVQ7Z7K6 275 aaPredicted RBP16.28■□□□□ 0.2
SS18-224ENST00000584083 URM1Q9BTM9 101 aaKnown RBP16.28■□□□□ 0.2
SS18-224ENST00000584083 OR2S2Q9NQN1 319 aa16.28■□□□□ 0.2
SS18-224ENST00000584083 IGHV3-72A0A0B4J1Y9 119 aa16.27■□□□□ 0.2
SS18-224ENST00000584083 SLC31A2O15432 143 aa16.27■□□□□ 0.2
SS18-224ENST00000584083 IGKV1D-33P01593 117 aa16.27■□□□□ 0.2
SS18-224ENST00000584083 IGKV1-33P01594 117 aa16.27■□□□□ 0.2
SS18-224ENST00000584083 SSX1Q16384 188 aa16.27■□□□□ 0.2
SS18-224ENST00000584083 OR2W3Q7Z3T1 314 aa16.27■□□□□ 0.2
SS18-224ENST00000584083 ZNF554Q86TJ5 538 aa16.27■□□□□ 0.2
SS18-224ENST00000584083 SVOPQ8N4V2 548 aa16.27■□□□□ 0.2
SS18-224ENST00000584083 OR5AU1Q8NGC0 362 aa16.27■□□□□ 0.2
SS18-224ENST00000584083 CITED2Q99967 270 aaPredicted RBP16.27■□□□□ 0.2
SS18-224ENST00000584083 CHMP1AQ9HD42 196 aaPredicted RBP16.27■□□□□ 0.2
SS18-224ENST00000584083 PLEKHJ1Q9NW61 149 aa16.27■□□□□ 0.2
SS18-224ENST00000584083 MRPS14O60783 128 aaKnown RBP16.26■□□□□ 0.19
SS18-224ENST00000584083 PSMD7P51665 324 aa16.26■□□□□ 0.19
SS18-224ENST00000584083 CLDN12P56749 244 aa16.26■□□□□ 0.19
SS18-224ENST00000584083 CT45A1Q5HYN5 189 aa16.26■□□□□ 0.19
SS18-224ENST00000584083 SLC25A48Q6ZT89 311 aaKnown RBP16.26■□□□□ 0.19
SS18-224ENST00000584083 C5orf24Q7Z6I8 188 aa16.26■□□□□ 0.19
SS18-224ENST00000584083 ZNF439Q8NDP4 499 aa16.26■□□□□ 0.19
SS18-224ENST00000584083 OR51D1Q8NGF3 324 aa16.26■□□□□ 0.19
SS18-224ENST00000584083 OR52L2PQ8NGH6 319 aa16.26■□□□□ 0.19
SS18-224ENST00000584083 CT45A3Q8NHU0 189 aa16.26■□□□□ 0.19
SS18-224ENST00000584083 WIPF2Q8TF74 440 aaPredicted RBP16.26■□□□□ 0.19
SS18-224ENST00000584083 RTN4IP1Q8WWV3 396 aaPredicted RBP16.26■□□□□ 0.19
SS18-224ENST00000584083 ST6GALNAC6Q969X2 333 aa16.26■□□□□ 0.19
SS18-224ENST00000584083 LPAR5Q9H1C0 372 aa16.26■□□□□ 0.19
SS18-224ENST00000584083 V9GY05 133 aa16.26■□□□□ 0.19
SS18-224ENST00000584083 A0A0A6YYD4 124 aa16.25■□□□□ 0.19
SS18-224ENST00000584083 SOCS1O15524 211 aa16.25■□□□□ 0.19
SS18-224ENST00000584083 DENRO43583 198 aaKnown RBP16.25■□□□□ 0.19
SS18-224ENST00000584083 RANBP1P43487 201 aa16.25■□□□□ 0.19
SS18-224ENST00000584083 ZNF134P52741 427 aa16.25■□□□□ 0.19
SS18-224ENST00000584083 DEFA6Q01524 100 aa16.25■□□□□ 0.19
SS18-224ENST00000584083 GNMTQ14749 295 aa16.25■□□□□ 0.19
SS18-224ENST00000584083 MORN2Q502X0 79 aa16.25■□□□□ 0.19
SS18-224ENST00000584083 NDUFA11Q86Y39 141 aa16.25■□□□□ 0.19
SS18-224ENST00000584083 SETD6Q8TBK2 473 aa16.25■□□□□ 0.19
SS18-224ENST00000584083 GALMQ96C23 342 aa16.25■□□□□ 0.19
SS18-224ENST00000584083 NDUFB11Q9NX14 153 aa16.25■□□□□ 0.19
SS18-224ENST00000584083 ABRACLQ9P1F3 81 aa16.25■□□□□ 0.19
SS18-224ENST00000584083 LRRC42Q9Y546 428 aa16.25■□□□□ 0.19
SS18-224ENST00000584083 MEGF8Q7Z7M0 2845 aa16.24■□□□□ 0.19
SS18-224ENST00000584083 C2orf76Q3KRA6 126 aa16.24■□□□□ 0.19
SS18-224ENST00000584083 HES5Q5TA89 166 aa16.24■□□□□ 0.19
SS18-224ENST00000584083 STEAP3Q658P3 488 aa16.24■□□□□ 0.19
SS18-224ENST00000584083 TGIF2LXQ8IUE1 241 aa16.24■□□□□ 0.19
SS18-224ENST00000584083 FAM3DQ96BQ1 224 aa16.24■□□□□ 0.19
SS18-224ENST00000584083 EAF1Q96JC9 268 aaPredicted RBP16.24■□□□□ 0.19
SS18-224ENST00000584083 JPT1Q9UK76 154 aa16.24■□□□□ 0.19
SS18-224ENST00000584083 CMYA5Q8N3K9 4069 aa16.23■□□□□ 0.19
SS18-224ENST00000584083 PDCD5O14737 125 aa16.23■□□□□ 0.19
SS18-224ENST00000584083 TXNL1O43396 289 aa16.23■□□□□ 0.19
SS18-224ENST00000584083 MYL9P24844 172 aa16.23■□□□□ 0.19
SS18-224ENST00000584083 PPP1CCP36873 323 aaKnown RBP16.23■□□□□ 0.19
SS18-224ENST00000584083 HTD2P86397 168 aa16.23■□□□□ 0.19
SS18-224ENST00000584083 SPARTQ8N0X7 666 aa16.23■□□□□ 0.19
SS18-224ENST00000584083 FAM89BQ8N5H3 189 aa16.23■□□□□ 0.19
SS18-224ENST00000584083 C5orf56Q8N8D9 126 aa16.23■□□□□ 0.19
SS18-224ENST00000584083 OR2T10Q8NGZ9 312 aa16.23■□□□□ 0.19
SS18-224ENST00000584083 IL1F10Q8WWZ1 152 aa16.23■□□□□ 0.19
SS18-224ENST00000584083 TRAV1-2A0A0B4J238 106 aa16.22■□□□□ 0.19
SS18-224ENST00000584083 TRDV1A0A1B0GX56 115 aa16.22■□□□□ 0.19
SS18-224ENST00000584083 A0A1W2PRX2 142 aa16.22■□□□□ 0.19
SS18-224ENST00000584083 NCBP2LA6PVI3 153 aaKnown RBP16.22■□□□□ 0.19
SS18-224ENST00000584083 FGF16O43320 207 aa16.22■□□□□ 0.19
SS18-224ENST00000584083 RGS11O94810 467 aa16.22■□□□□ 0.19
SS18-224ENST00000584083 NAPSAO96009 420 aa16.22■□□□□ 0.19
SS18-224ENST00000584083 PSMB9P28065 219 aa16.22■□□□□ 0.19
SS18-224ENST00000584083 VEGFCP49767 419 aa16.22■□□□□ 0.19
SS18-224ENST00000584083 ZNF137PP52743 207 aa16.22■□□□□ 0.19
SS18-224ENST00000584083 EBI3Q14213 229 aa16.22■□□□□ 0.19
SS18-224ENST00000584083 HMGN3Q15651 99 aa16.22■□□□□ 0.19
SS18-224ENST00000584083 CD200R1LQ6Q8B3 271 aa16.22■□□□□ 0.19
SS18-224ENST00000584083 IZUMO1Q8IYV9 350 aa16.22■□□□□ 0.19
SS18-224ENST00000584083 R3HDM4Q96D70 268 aa16.22■□□□□ 0.19
SS18-224ENST00000584083 ABHD14AQ9BUJ0 271 aa16.22■□□□□ 0.19
SS18-224ENST00000584083 YTHDF1Q9BYJ9 559 aaKnown RBP16.22■□□□□ 0.19
SS18-224ENST00000584083 RIMS4Q9H426 269 aaPredicted RBP16.22■□□□□ 0.19
SS18-224ENST00000584083 STEAP1Q9UHE8 339 aa16.22■□□□□ 0.19
SS18-224ENST00000584083 AK3Q9UIJ7 227 aa16.22■□□□□ 0.19
SS18-224ENST00000584083 PLXNB1O43157 2135 aa16.21■□□□□ 0.19
SS18-224ENST00000584083 KCNAB3O43448 404 aa16.21■□□□□ 0.19
SS18-224ENST00000584083 WIPF1O43516 503 aa16.21■□□□□ 0.19
SS18-224ENST00000584083 YPEL1O60688 119 aa16.21■□□□□ 0.19
SS18-224ENST00000584083 OPN1MWP04001 364 aa16.21■□□□□ 0.19
SS18-224ENST00000584083 OPN1MW2P0DN77 364 aa16.21■□□□□ 0.19
SS18-224ENST00000584083 OPN1MW3P0DN78 364 aa16.21■□□□□ 0.19
SS18-224ENST00000584083 CD1BP29016 333 aa16.21■□□□□ 0.19
SS18-224ENST00000584083 OR10A3P58181 314 aa16.21■□□□□ 0.19
SS18-224ENST00000584083 UBE2UQ5VVX9 321 aa16.21■□□□□ 0.19
SS18-224ENST00000584083 MOB1BQ7L9L4 216 aa16.21■□□□□ 0.19
SS18-224ENST00000584083 OR4F17Q8NGA8 305 aa16.21■□□□□ 0.19
SS18-224ENST00000584083 OR4X2Q8NGF9 303 aa16.21■□□□□ 0.19
SS18-224ENST00000584083 FCGR1BQ92637 280 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms