RNA–Protein interactions for RNA: ENST00000583800.1

SMCHD1-210, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-210ENST00000583800 GABARAPL1Q9H0R8 117 aa6.09□□□□□ -1.43
SMCHD1-210ENST00000583800 RIBC2Q9H4K1 309 aa6.09□□□□□ -1.43
SMCHD1-210ENST00000583800 ZCCHC4Q9H5U6 513 aa6.09□□□□□ -1.43
SMCHD1-210ENST00000583800 RHOFQ9HBH0 211 aa6.09□□□□□ -1.43
SMCHD1-210ENST00000583800 GAR1Q9NY12 217 aaKnown RBP6.09□□□□□ -1.43
SMCHD1-210ENST00000583800 UBE2QL1A1L167 161 aa6.08□□□□□ -1.44
SMCHD1-210ENST00000583800 NPIPB11E5RHQ5 1161 aa6.08□□□□□ -1.44
SMCHD1-210ENST00000583800 CCRL2O00421 344 aa6.08□□□□□ -1.44
SMCHD1-210ENST00000583800 LDLRAD4O15165 306 aa6.08□□□□□ -1.44
SMCHD1-210ENST00000583800 GYG2O15488 501 aa6.08□□□□□ -1.44
SMCHD1-210ENST00000583800 DBTP11182 482 aaKnown RBP6.08□□□□□ -1.44
SMCHD1-210ENST00000583800 CHATP28329 748 aa6.08□□□□□ -1.44
SMCHD1-210ENST00000583800 C21orf33P30042 268 aaPredicted RBP6.08□□□□□ -1.44
SMCHD1-210ENST00000583800 CDX1P47902 265 aaPredicted RBP6.08□□□□□ -1.44
SMCHD1-210ENST00000583800 ZNF816Q0VGE8 651 aaPredicted RBP6.08□□□□□ -1.44
SMCHD1-210ENST00000583800 EBI3Q14213 229 aa6.08□□□□□ -1.44
SMCHD1-210ENST00000583800 KIR2DS1Q14954 304 aa6.08□□□□□ -1.44
SMCHD1-210ENST00000583800 KISS1Q15726 138 aa6.08□□□□□ -1.44
SMCHD1-210ENST00000583800 PIGYQ3MUY2 71 aa6.08□□□□□ -1.44
SMCHD1-210ENST00000583800 ZNF260Q3ZCT1 412 aa6.08□□□□□ -1.44
SMCHD1-210ENST00000583800 DNAL1Q4LDG9 190 aa6.08□□□□□ -1.44
SMCHD1-210ENST00000583800 KLHL22Q53GT1 634 aa6.08□□□□□ -1.44
SMCHD1-210ENST00000583800 CASC10Q5T4H9 136 aa6.08□□□□□ -1.44
SMCHD1-210ENST00000583800 ZNF691Q5VV52 312 aa6.08□□□□□ -1.44
SMCHD1-210ENST00000583800 FAM53AQ6NSI3 398 aaPredicted RBP6.08□□□□□ -1.44
SMCHD1-210ENST00000583800 AMIGO2Q86SJ2 522 aa6.08□□□□□ -1.44
SMCHD1-210ENST00000583800 TGIF2LXQ8IUE1 241 aa6.08□□□□□ -1.44
SMCHD1-210ENST00000583800 IZUMO1Q8IYV9 350 aa6.08□□□□□ -1.44
SMCHD1-210ENST00000583800 Q8N6K4 173 aa6.08□□□□□ -1.44
SMCHD1-210ENST00000583800 ZNF565Q8N9K5 539 aa6.08□□□□□ -1.44
SMCHD1-210ENST00000583800 TMEM116Q8NCL8 245 aa6.08□□□□□ -1.44
SMCHD1-210ENST00000583800 OR8J1Q8NGP2 316 aa6.08□□□□□ -1.44
SMCHD1-210ENST00000583800 OR10K1Q8NGX5 313 aa6.08□□□□□ -1.44
SMCHD1-210ENST00000583800 MUC7Q8TAX7 377 aa6.08□□□□□ -1.44
SMCHD1-210ENST00000583800 UBALD1Q8TB05 177 aa6.08□□□□□ -1.44
SMCHD1-210ENST00000583800 CNIH3Q8TBE1 160 aa6.08□□□□□ -1.44
SMCHD1-210ENST00000583800 HSPB9Q9BQS6 159 aa6.08□□□□□ -1.44
SMCHD1-210ENST00000583800 CTDSP1Q9GZU7 261 aa6.08□□□□□ -1.44
SMCHD1-210ENST00000583800 ABCG5Q9H222 651 aa6.08□□□□□ -1.44
SMCHD1-210ENST00000583800 SCPEP1Q9HB40 452 aa6.08□□□□□ -1.44
SMCHD1-210ENST00000583800 ZNF581Q9P0T4 197 aa6.08□□□□□ -1.44
SMCHD1-210ENST00000583800 ZNF256Q9Y2P7 627 aaPredicted RBP6.08□□□□□ -1.44
SMCHD1-210ENST00000583800 DNAH1Q9P2D7 4330 aa6.08□□□□□ -1.44
SMCHD1-210ENST00000583800 IGHV3-43A0A0B4J1X8 118 aa6.07□□□□□ -1.44
SMCHD1-210ENST00000583800 DAPL1A0PJW8 107 aa6.07□□□□□ -1.44
SMCHD1-210ENST00000583800 OR4C45A6NMZ5 311 aa6.07□□□□□ -1.44
SMCHD1-210ENST00000583800 A8MZ25 164 aa6.07□□□□□ -1.44
SMCHD1-210ENST00000583800 ZNF736B4DX44 427 aaPredicted RBP6.07□□□□□ -1.44
SMCHD1-210ENST00000583800 J3QLW9 94 aa6.07□□□□□ -1.44
SMCHD1-210ENST00000583800 GABRPO00591 440 aa6.07□□□□□ -1.44
SMCHD1-210ENST00000583800 SULT1B1O43704 296 aa6.07□□□□□ -1.44
SMCHD1-210ENST00000583800 MPZL2O60487 215 aa6.07□□□□□ -1.44
SMCHD1-210ENST00000583800 GAPDHP04406 335 aaKnown RBP6.07□□□□□ -1.44
SMCHD1-210ENST00000583800 ELANEP08246 267 aa6.07□□□□□ -1.44
SMCHD1-210ENST00000583800 IGHV3-43DP0DP04 118 aa6.07□□□□□ -1.44
SMCHD1-210ENST00000583800 ZNF19P17023 458 aa6.07□□□□□ -1.44
SMCHD1-210ENST00000583800 GCSHP23434 173 aa6.07□□□□□ -1.44
SMCHD1-210ENST00000583800 CFHR3Q02985 330 aa6.07□□□□□ -1.44
SMCHD1-210ENST00000583800 TMED1Q13445 227 aa6.07□□□□□ -1.44
SMCHD1-210ENST00000583800 FOXE3Q13461 319 aa6.07□□□□□ -1.44
SMCHD1-210ENST00000583800 ALKBH1Q13686 389 aaKnown RBP6.07□□□□□ -1.44
SMCHD1-210ENST00000583800 IL13RA2Q14627 380 aa6.07□□□□□ -1.44
SMCHD1-210ENST00000583800 ELP2Q6IA86 826 aa6.07□□□□□ -1.44
SMCHD1-210ENST00000583800 SBSPONQ8IVN8 264 aa6.07□□□□□ -1.44
SMCHD1-210ENST00000583800 OR11H1Q8NG94 326 aa6.07□□□□□ -1.44
SMCHD1-210ENST00000583800 OR2T10Q8NGZ9 312 aa6.07□□□□□ -1.44
SMCHD1-210ENST00000583800 TNFAIP8L1Q8WVP5 186 aa6.07□□□□□ -1.44
SMCHD1-210ENST00000583800 C4orf3Q8WVX3 66 aa6.07□□□□□ -1.44
SMCHD1-210ENST00000583800 RFKQ969G6 155 aa6.07□□□□□ -1.44
SMCHD1-210ENST00000583800 PELI1Q96FA3 418 aa6.07□□□□□ -1.44
SMCHD1-210ENST00000583800 C4orf36Q96KX1 117 aa6.07□□□□□ -1.44
SMCHD1-210ENST00000583800 RCHY1Q96PM5 261 aa6.07□□□□□ -1.44
SMCHD1-210ENST00000583800 LYSTQ99698 3801 aa6.07□□□□□ -1.44
SMCHD1-210ENST00000583800 GABARAPL3Q9BY60 117 aa6.07□□□□□ -1.44
SMCHD1-210ENST00000583800 BARHL1Q9BZE3 327 aa6.07□□□□□ -1.44
SMCHD1-210ENST00000583800 FAM192AQ9GZU8 254 aa6.07□□□□□ -1.44
SMCHD1-210ENST00000583800 NCOR1P1Q9H4R4 102 aa6.07□□□□□ -1.44
SMCHD1-210ENST00000583800 LINC00574Q9H8X3 128 aa6.07□□□□□ -1.44
SMCHD1-210ENST00000583800 STEAP1Q9UHE8 339 aa6.07□□□□□ -1.44
SMCHD1-210ENST00000583800 ENOPH1Q9UHY7 261 aa6.07□□□□□ -1.44
SMCHD1-210ENST00000583800 SMAD5-AS1Q9Y6J3 95 aa6.07□□□□□ -1.44
SMCHD1-210ENST00000583800 J3QRE1 110 aa6.06□□□□□ -1.44
SMCHD1-210ENST00000583800 SLC31A2O15432 143 aa6.06□□□□□ -1.44
SMCHD1-210ENST00000583800 IGHG4P01861 327 aa6.06□□□□□ -1.44
SMCHD1-210ENST00000583800 VDAC1P21796 283 aa6.06□□□□□ -1.44
SMCHD1-210ENST00000583800 FASP25445 335 aa6.06□□□□□ -1.44
SMCHD1-210ENST00000583800 PAX5Q02548 391 aa6.06□□□□□ -1.44
SMCHD1-210ENST00000583800 ASPHD1Q5U4P2 390 aa6.06□□□□□ -1.44
SMCHD1-210ENST00000583800 SLC16A12Q6ZSM3 486 aa6.06□□□□□ -1.44
SMCHD1-210ENST00000583800 SATL1Q86VE3 508 aa6.06□□□□□ -1.44
SMCHD1-210ENST00000583800 PARP16Q8N5Y8 322 aa6.06□□□□□ -1.44
SMCHD1-210ENST00000583800 SUMF2Q8NBJ7 301 aa6.06□□□□□ -1.44
SMCHD1-210ENST00000583800 TMEM104Q8NE00 496 aa6.06□□□□□ -1.44
SMCHD1-210ENST00000583800 PXT1Q8NFP0 134 aa6.06□□□□□ -1.44
SMCHD1-210ENST00000583800 OR10A7Q8NGE5 316 aa6.06□□□□□ -1.44
SMCHD1-210ENST00000583800 OR51A2Q8NGJ7 313 aa6.06□□□□□ -1.44
SMCHD1-210ENST00000583800 TSEN15Q8WW01 171 aaKnown RBP6.06□□□□□ -1.44
SMCHD1-210ENST00000583800 RTN4IP1Q8WWV3 396 aaPredicted RBP6.06□□□□□ -1.44
SMCHD1-210ENST00000583800 KCTD7Q96MP8 289 aa6.06□□□□□ -1.44
SMCHD1-210ENST00000583800 S1PR3Q99500 378 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms