RNA–Protein interactions for RNA: ENST00000583328.5

TOP3A-215, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-215ENST00000583328 FHL3Q13643 280 aa9.6□□□□□ -0.87
TOP3A-215ENST00000583328 DDI2Q5TDH0 399 aa9.6□□□□□ -0.87
TOP3A-215ENST00000583328 MOB3BQ86TA1 216 aa9.6□□□□□ -0.87
TOP3A-215ENST00000583328 TGIF2LXQ8IUE1 241 aa9.6□□□□□ -0.87
TOP3A-215ENST00000583328 NKAIN3Q8N8D7 197 aa9.6□□□□□ -0.87
TOP3A-215ENST00000583328 RNF152Q8N8N0 203 aa9.6□□□□□ -0.87
TOP3A-215ENST00000583328 RFT1Q96AA3 541 aa9.6□□□□□ -0.87
TOP3A-215ENST00000583328 ISOC1Q96CN7 298 aa9.6□□□□□ -0.87
TOP3A-215ENST00000583328 COQ2Q96H96 371 aa9.6□□□□□ -0.87
TOP3A-215ENST00000583328 GPER1Q99527 375 aa9.6□□□□□ -0.87
TOP3A-215ENST00000583328 MRPS26Q9BYN8 205 aaKnown RBP9.6□□□□□ -0.87
TOP3A-215ENST00000583328 LIN7CQ9NUP9 197 aaKnown RBP9.6□□□□□ -0.87
TOP3A-215ENST00000583328 STUB1Q9UNE7 303 aa9.6□□□□□ -0.87
TOP3A-215ENST00000583328 PSG11Q9UQ72 335 aa9.6□□□□□ -0.87
TOP3A-215ENST00000583328 SORL1Q92673 2214 aa9.6□□□□□ -0.87
TOP3A-215ENST00000583328 DEGS1O15121 323 aa9.59□□□□□ -0.87
TOP3A-215ENST00000583328 MAS1P04201 325 aa9.59□□□□□ -0.87
TOP3A-215ENST00000583328 CSN2P05814 226 aa9.59□□□□□ -0.87
TOP3A-215ENST00000583328 OR8U8P0C7N1 319 aa9.59□□□□□ -0.87
TOP3A-215ENST00000583328 SRMP19623 302 aa9.59□□□□□ -0.87
TOP3A-215ENST00000583328 VDAC1P21796 283 aa9.59□□□□□ -0.87
TOP3A-215ENST00000583328 ZNF93P35789 620 aaPredicted RBP9.59□□□□□ -0.87
TOP3A-215ENST00000583328 GLP1RP43220 463 aa9.59□□□□□ -0.87
TOP3A-215ENST00000583328 GNG10P50151 68 aa9.59□□□□□ -0.87
TOP3A-215ENST00000583328 ZP1P60852 638 aa9.59□□□□□ -0.87
TOP3A-215ENST00000583328 ATXN7L3Q14CW9 347 aaPredicted RBP9.59□□□□□ -0.87
TOP3A-215ENST00000583328 LTC4SQ16873 150 aa9.59□□□□□ -0.87
TOP3A-215ENST00000583328 ZNF429Q86V71 674 aa9.59□□□□□ -0.87
TOP3A-215ENST00000583328 SATL1Q86VE3 508 aa9.59□□□□□ -0.87
TOP3A-215ENST00000583328 CDH26Q8IXH8 852 aa9.59□□□□□ -0.87
TOP3A-215ENST00000583328 SAXO1Q8IYX7 474 aa9.59□□□□□ -0.87
TOP3A-215ENST00000583328 ZNF565Q8N9K5 539 aa9.59□□□□□ -0.87
TOP3A-215ENST00000583328 OR5D18Q8NGL1 313 aa9.59□□□□□ -0.87
TOP3A-215ENST00000583328 OR1N2Q8NGR9 330 aa9.59□□□□□ -0.87
TOP3A-215ENST00000583328 OR10X1Q8NGY0 326 aa9.59□□□□□ -0.87
TOP3A-215ENST00000583328 EAF1Q96JC9 268 aaPredicted RBP9.59□□□□□ -0.87
TOP3A-215ENST00000583328 LYSTQ99698 3801 aa9.59□□□□□ -0.87
TOP3A-215ENST00000583328 RASL11BQ9BPW5 248 aa9.59□□□□□ -0.87
TOP3A-215ENST00000583328 PPIL3Q9H2H8 161 aaKnown RBP9.59□□□□□ -0.87
TOP3A-215ENST00000583328 IDI2-AS1Q9NZ38 188 aa9.59□□□□□ -0.87
TOP3A-215ENST00000583328 IGHV3-72A0A0B4J1Y9 119 aa9.58□□□□□ -0.88
TOP3A-215ENST00000583328 IGHG4P01861 327 aa9.58□□□□□ -0.88
TOP3A-215ENST00000583328 GAPDHP04406 335 aaKnown RBP9.58□□□□□ -0.88
TOP3A-215ENST00000583328 CGB3P0DN86 165 aa9.58□□□□□ -0.88
TOP3A-215ENST00000583328 CGB7P0DN87 165 aa9.58□□□□□ -0.88
TOP3A-215ENST00000583328 TMEM225BP0DP42 221 aa9.58□□□□□ -0.88
TOP3A-215ENST00000583328 SPNP16150 400 aa9.58□□□□□ -0.88
TOP3A-215ENST00000583328 CD36P16671 472 aa9.58□□□□□ -0.88
TOP3A-215ENST00000583328 CALRP27797 417 aaKnown RBP9.58□□□□□ -0.88
TOP3A-215ENST00000583328 FGF9P31371 208 aaPredicted RBP9.58□□□□□ -0.88
TOP3A-215ENST00000583328 EBI3Q14213 229 aa9.58□□□□□ -0.88
TOP3A-215ENST00000583328 Q6P435 159 aa9.58□□□□□ -0.88
TOP3A-215ENST00000583328 LRRTM1Q86UE6 522 aa9.58□□□□□ -0.88
TOP3A-215ENST00000583328 JAGN1Q8N5M9 183 aa9.58□□□□□ -0.88
TOP3A-215ENST00000583328 Q8N9W7 124 aa9.58□□□□□ -0.88
TOP3A-215ENST00000583328 CHST4Q8NCG5 386 aa9.58□□□□□ -0.88
TOP3A-215ENST00000583328 PXT1Q8NFP0 134 aa9.58□□□□□ -0.88
TOP3A-215ENST00000583328 OR2T10Q8NGZ9 312 aa9.58□□□□□ -0.88
TOP3A-215ENST00000583328 RFESDQ8TAC1 157 aa9.58□□□□□ -0.88
TOP3A-215ENST00000583328 TNFAIP8L1Q8WVP5 186 aa9.58□□□□□ -0.88
TOP3A-215ENST00000583328 RHOFQ9HBH0 211 aa9.58□□□□□ -0.88
TOP3A-215ENST00000583328 CALYQ9NYX4 217 aa9.58□□□□□ -0.88
TOP3A-215ENST00000583328 SSR3Q9UNL2 185 aa9.58□□□□□ -0.88
TOP3A-215ENST00000583328 MEIKINA0A087WXM9 373 aa9.57□□□□□ -0.88
TOP3A-215ENST00000583328 IGKV1-12A0A0C4DH73 117 aa9.57□□□□□ -0.88
TOP3A-215ENST00000583328 SLC33A1O00400 549 aaPredicted RBP9.57□□□□□ -0.88
TOP3A-215ENST00000583328 HSD17B6O14756 317 aa9.57□□□□□ -0.88
TOP3A-215ENST00000583328 SAP30O75446 220 aa9.57□□□□□ -0.88
TOP3A-215ENST00000583328 JTBO76095 146 aa9.57□□□□□ -0.88
TOP3A-215ENST00000583328 KDM4BO94953 1096 aa9.57□□□□□ -0.88
TOP3A-215ENST00000583328 IGKV1D-12P01611 117 aa9.57□□□□□ -0.88
TOP3A-215ENST00000583328 GP9P14770 177 aa9.57□□□□□ -0.88
TOP3A-215ENST00000583328 MYL9P24844 172 aa9.57□□□□□ -0.88
TOP3A-215ENST00000583328 REG1BP48304 166 aa9.57□□□□□ -0.88
TOP3A-215ENST00000583328 ZNF616Q08AN1 781 aa9.57□□□□□ -0.88
TOP3A-215ENST00000583328 TIMM50Q3ZCQ8 353 aa9.57□□□□□ -0.88
TOP3A-215ENST00000583328 GLT8D1Q68CQ7 371 aa9.57□□□□□ -0.88
TOP3A-215ENST00000583328 C22orf42Q6IC83 251 aa9.57□□□□□ -0.88
TOP3A-215ENST00000583328 ASCL4Q6XD76 172 aa9.57□□□□□ -0.88
TOP3A-215ENST00000583328 LYPD6Q86Y78 171 aa9.57□□□□□ -0.88
TOP3A-215ENST00000583328 OR13A1Q8NGR1 328 aa9.57□□□□□ -0.88
TOP3A-215ENST00000583328 YIPF6Q96EC8 236 aa9.57□□□□□ -0.88
TOP3A-215ENST00000583328 KCTD7Q96MP8 289 aa9.57□□□□□ -0.88
TOP3A-215ENST00000583328 TM2D3Q9BRN9 247 aa9.57□□□□□ -0.88
TOP3A-215ENST00000583328 UQCC2Q9BRT2 126 aa9.57□□□□□ -0.88
TOP3A-215ENST00000583328 FAM192AQ9GZU8 254 aa9.57□□□□□ -0.88
TOP3A-215ENST00000583328 EDA2RQ9HAV5 297 aa9.57□□□□□ -0.88
TOP3A-215ENST00000583328 TXNL4BQ9NX01 149 aaKnown RBP9.57□□□□□ -0.88
TOP3A-215ENST00000583328 TRAV1-2A0A0B4J238 106 aa9.56□□□□□ -0.88
TOP3A-215ENST00000583328 IGHV1-3A0A0C4DH29 117 aa9.56□□□□□ -0.88
TOP3A-215ENST00000583328 A0A1W2PPE3 182 aa9.56□□□□□ -0.88
TOP3A-215ENST00000583328 HSPB6O14558 160 aa9.56□□□□□ -0.88
TOP3A-215ENST00000583328 OVOL1O14753 267 aa9.56□□□□□ -0.88
TOP3A-215ENST00000583328 LDLRAD4O15165 306 aa9.56□□□□□ -0.88
TOP3A-215ENST00000583328 IL1AP01583 271 aa9.56□□□□□ -0.88
TOP3A-215ENST00000583328 CD37P11049 281 aa9.56□□□□□ -0.88
TOP3A-215ENST00000583328 GADD45AP24522 165 aa9.56□□□□□ -0.88
TOP3A-215ENST00000583328 PSMB8P28062 276 aa9.56□□□□□ -0.88
TOP3A-215ENST00000583328 CFHR3Q02985 330 aa9.56□□□□□ -0.88
TOP3A-215ENST00000583328 ZNF816Q0VGE8 651 aaPredicted RBP9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms