RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 COL10A1Q03692 680 aa19.03■□□□□ 0.64
CCDC47-204ENST00000582252 GNMTQ14749 295 aa19.03■□□□□ 0.64
CCDC47-204ENST00000582252 EIF5AL1Q6IS14 154 aaKnown RBP19.03■□□□□ 0.64
CCDC47-204ENST00000582252 RELL2Q8NC24 303 aaPredicted RBP19.03■□□□□ 0.64
CCDC47-204ENST00000582252 OR4D5Q8NGN0 318 aa19.03■□□□□ 0.64
CCDC47-204ENST00000582252 ANGPTL6Q8NI99 470 aa19.03■□□□□ 0.64
CCDC47-204ENST00000582252 OR2V2Q96R30 315 aa19.03■□□□□ 0.64
CCDC47-204ENST00000582252 TRAV39A0A0B4J263 110 aa19.02■□□□□ 0.63
CCDC47-204ENST00000582252 TNFSF4P23510 183 aa19.02■□□□□ 0.63
CCDC47-204ENST00000582252 IL2RGP31785 369 aa19.02■□□□□ 0.63
CCDC47-204ENST00000582252 CEACAM6P40199 344 aa19.02■□□□□ 0.63
CCDC47-204ENST00000582252 GABRA2P47869 451 aa19.02■□□□□ 0.63
CCDC47-204ENST00000582252 OR3A1P47881 315 aa19.02■□□□□ 0.63
CCDC47-204ENST00000582252 P2RY1P47900 373 aa19.02■□□□□ 0.63
CCDC47-204ENST00000582252 TESK1Q15569 626 aa19.02■□□□□ 0.63
CCDC47-204ENST00000582252 KRBOX4Q5JUW0 171 aa19.02■□□□□ 0.63
CCDC47-204ENST00000582252 GPR157Q5UAW9 335 aa19.02■□□□□ 0.63
CCDC47-204ENST00000582252 GALNT11Q8NCW6 608 aa19.02■□□□□ 0.63
CCDC47-204ENST00000582252 RNF212BA8MTL3 300 aa19.01■□□□□ 0.63
CCDC47-204ENST00000582252 PVALBP20472 110 aaPredicted RBP19.01■□□□□ 0.63
CCDC47-204ENST00000582252 PRDX2P32119 198 aa19.01■□□□□ 0.63
CCDC47-204ENST00000582252 CCKARP32238 428 aa19.01■□□□□ 0.63
CCDC47-204ENST00000582252 OR52M1Q8NGK5 317 aa19.01■□□□□ 0.63
CCDC47-204ENST00000582252 NINJ1Q92982 152 aa19.01■□□□□ 0.63
CCDC47-204ENST00000582252 LURAP1Q96LR2 239 aa19.01■□□□□ 0.63
CCDC47-204ENST00000582252 LIN7CQ9NUP9 197 aaKnown RBP19.01■□□□□ 0.63
CCDC47-204ENST00000582252 KCNS2Q9ULS6 477 aa19.01■□□□□ 0.63
CCDC47-204ENST00000582252 CLEC18AA5D8T8 446 aa19■□□□□ 0.63
CCDC47-204ENST00000582252 MFSD2BA6NFX1 497 aa19■□□□□ 0.63
CCDC47-204ENST00000582252 GPR137BO60478 399 aa19■□□□□ 0.63
CCDC47-204ENST00000582252 SERPINE2P07093 398 aa19■□□□□ 0.63
CCDC47-204ENST00000582252 P2RX3P56373 397 aa19■□□□□ 0.63
CCDC47-204ENST00000582252 AESQ08117 197 aa19■□□□□ 0.63
CCDC47-204ENST00000582252 CLEC18CQ8NCF0 446 aa19■□□□□ 0.63
CCDC47-204ENST00000582252 ZBTB34Q8NCN2 500 aa19■□□□□ 0.63
CCDC47-204ENST00000582252 COQ3Q9NZJ6 369 aa19■□□□□ 0.63
CCDC47-204ENST00000582252 ZDHHC8Q9ULC8 765 aa19■□□□□ 0.63
CCDC47-204ENST00000582252 CHD3Q12873 2000 aaKnown RBP19■□□□□ 0.63
CCDC47-204ENST00000582252 NKX2-6A6NCS4 301 aa19■□□□□ 0.63
CCDC47-204ENST00000582252 TNFSF12O43508 249 aa19■□□□□ 0.63
CCDC47-204ENST00000582252 SPRY3O43610 288 aa19■□□□□ 0.63
CCDC47-204ENST00000582252 GAPDHP04406 335 aaKnown RBP19■□□□□ 0.63
CCDC47-204ENST00000582252 GATA4P43694 442 aa19■□□□□ 0.63
CCDC47-204ENST00000582252 NKX2-1P43699 371 aaPredicted RBP19■□□□□ 0.63
CCDC47-204ENST00000582252 FAM74A1Q5RGS3 127 aa19■□□□□ 0.63
CCDC47-204ENST00000582252 HSD17B13Q7Z5P4 300 aaPredicted RBP19■□□□□ 0.63
CCDC47-204ENST00000582252 FAM219AQ8IW50 185 aa19■□□□□ 0.63
CCDC47-204ENST00000582252 COQ2Q96H96 371 aa19■□□□□ 0.63
CCDC47-204ENST00000582252 REG4Q9BYZ8 158 aa19■□□□□ 0.63
CCDC47-204ENST00000582252 MRPL37Q9BZE1 423 aaKnown RBP19■□□□□ 0.63
CCDC47-204ENST00000582252 TOLLIPQ9H0E2 274 aa19■□□□□ 0.63
CCDC47-204ENST00000582252 PLEKHF2Q9H8W4 249 aa19■□□□□ 0.63
CCDC47-204ENST00000582252 C12orf77C9JDV5 145 aa18.99■□□□□ 0.63
CCDC47-204ENST00000582252 JTBO76095 146 aa18.99■□□□□ 0.63
CCDC47-204ENST00000582252 PSG2P11465 335 aa18.99■□□□□ 0.63
CCDC47-204ENST00000582252 CHRNB4P30926 498 aa18.99■□□□□ 0.63
CCDC47-204ENST00000582252 RNF141Q8WVD5 230 aa18.99■□□□□ 0.63
CCDC47-204ENST00000582252 IL19Q9UHD0 177 aa18.99■□□□□ 0.63
CCDC47-204ENST00000582252 RCL1Q9Y2P8 373 aaKnown RBP18.99■□□□□ 0.63
CCDC47-204ENST00000582252 SPTBN1Q01082 2364 aaKnown RBP18.99■□□□□ 0.63
CCDC47-204ENST00000582252 TLE1Q04724 770 aa18.98■□□□□ 0.63
CCDC47-204ENST00000582252 MSMO1Q15800 293 aa18.98■□□□□ 0.63
CCDC47-204ENST00000582252 NMSQ5H8A3 153 aa18.98■□□□□ 0.63
CCDC47-204ENST00000582252 MOGAT3Q86VF5 341 aa18.98■□□□□ 0.63
CCDC47-204ENST00000582252 WFDC8Q8IUA0 241 aa18.98■□□□□ 0.63
CCDC47-204ENST00000582252 CCDC28AQ8IWP9 274 aa18.98■□□□□ 0.63
CCDC47-204ENST00000582252 EIF4E3Q8N5X7 224 aaKnown RBP18.98■□□□□ 0.63
CCDC47-204ENST00000582252 ITLN1Q8WWA0 313 aa18.98■□□□□ 0.63
CCDC47-204ENST00000582252 ERGIC1Q969X5 290 aa18.98■□□□□ 0.63
CCDC47-204ENST00000582252 SNX22Q96L94 193 aa18.98■□□□□ 0.63
CCDC47-204ENST00000582252 OR2S2Q9NQN1 319 aa18.98■□□□□ 0.63
CCDC47-204ENST00000582252 RELNP78509 3460 aa18.98■□□□□ 0.63
CCDC47-204ENST00000582252 ADAM20O43506 726 aa18.97■□□□□ 0.63
CCDC47-204ENST00000582252 HBZP02008 142 aa18.97■□□□□ 0.63
CCDC47-204ENST00000582252 SLC25A6P12236 298 aa18.97■□□□□ 0.63
CCDC47-204ENST00000582252 CD177Q8N6Q3 437 aa18.97■□□□□ 0.63
CCDC47-204ENST00000582252 OR51H1Q8NH63 302 aa18.97■□□□□ 0.63
CCDC47-204ENST00000582252 OR1L1Q8NH94 360 aa18.97■□□□□ 0.63
CCDC47-204ENST00000582252 NGBQ9NPG2 151 aa18.97■□□□□ 0.63
CCDC47-204ENST00000582252 SPINT2O43291 252 aa18.97■□□□□ 0.63
CCDC47-204ENST00000582252 OR8U9P0C7N5 309 aa18.97■□□□□ 0.63
CCDC47-204ENST00000582252 EGR1P18146 543 aa18.97■□□□□ 0.63
CCDC47-204ENST00000582252 ASCL1P50553 236 aa18.97■□□□□ 0.63
CCDC47-204ENST00000582252 TNFAIP6P98066 277 aaPredicted RBP18.97■□□□□ 0.63
CCDC47-204ENST00000582252 GCSAMQ8N6F7 178 aa18.97■□□□□ 0.63
CCDC47-204ENST00000582252 ZNF645Q8N7E2 425 aa18.97■□□□□ 0.63
CCDC47-204ENST00000582252 OR8U1Q8NH10 309 aa18.97■□□□□ 0.63
CCDC47-204ENST00000582252 DIRC2Q96SL1 478 aa18.97■□□□□ 0.63
CCDC47-204ENST00000582252 FBXL17Q9UF56 701 aa18.97■□□□□ 0.63
CCDC47-204ENST00000582252 PPP1R3CQ9UQK1 317 aa18.97■□□□□ 0.63
CCDC47-204ENST00000582252 MGST3O14880 152 aa18.96■□□□□ 0.63
CCDC47-204ENST00000582252 MMP9P14780 707 aa18.96■□□□□ 0.63
CCDC47-204ENST00000582252 TMEM33P57088 247 aa18.96■□□□□ 0.63
CCDC47-204ENST00000582252 BOLLQ8N9W6 283 aaKnown RBP18.96■□□□□ 0.63
CCDC47-204ENST00000582252 RNASE11Q8TAA1 199 aaKnown RBP18.96■□□□□ 0.63
CCDC47-204ENST00000582252 MRGPRDQ8TDS7 321 aa18.96■□□□□ 0.63
CCDC47-204ENST00000582252 GPHA2Q96T91 129 aa18.96■□□□□ 0.63
CCDC47-204ENST00000582252 METRNQ9UJH8 293 aa18.96■□□□□ 0.63
CCDC47-204ENST00000582252 CADP27708 2225 aa18.96■□□□□ 0.63
CCDC47-204ENST00000582252 BORCS7-ASMTA0A0B4J1R7 106 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms