RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 RUNX1Q01196 453 aa8.26□□□□□ -1.09
RFFL-209ENST00000581265 SMN1Q16637 294 aaKnown RBP8.26□□□□□ -1.09
RFFL-209ENST00000581265 ZNF260Q3ZCT1 412 aa8.26□□□□□ -1.09
RFFL-209ENST00000581265 C6orf183Q5T699 404 aa8.26□□□□□ -1.09
RFFL-209ENST00000581265 OR2G6Q5TZ20 316 aa8.26□□□□□ -1.09
RFFL-209ENST00000581265 DMKNQ6E0U4 476 aaPredicted RBP8.26□□□□□ -1.09
RFFL-209ENST00000581265 RAB12Q6IQ22 244 aa8.26□□□□□ -1.09
RFFL-209ENST00000581265 TRAT1Q6PIZ9 186 aa8.26□□□□□ -1.09
RFFL-209ENST00000581265 CDH26Q8IXH8 852 aa8.26□□□□□ -1.09
RFFL-209ENST00000581265 GHSRQ92847 366 aa8.26□□□□□ -1.09
RFFL-209ENST00000581265 RBMXL1Q96E39 390 aaKnown RBP8.26□□□□□ -1.09
RFFL-209ENST00000581265 KLK15Q9H2R5 256 aa8.26□□□□□ -1.09
RFFL-209ENST00000581265 ETAA1Q9NY74 926 aa8.26□□□□□ -1.09
RFFL-209ENST00000581265 CKLFQ9UBR5 152 aa8.26□□□□□ -1.09
RFFL-209ENST00000581265 ZNF107Q9UII5 783 aaPredicted RBP8.26□□□□□ -1.09
RFFL-209ENST00000581265 ZNF256Q9Y2P7 627 aaPredicted RBP8.26□□□□□ -1.09
RFFL-209ENST00000581265 TRAV8-7A0A075B6U6 113 aa8.25□□□□□ -1.09
RFFL-209ENST00000581265 MAGEA13PA6NCF6 341 aa8.25□□□□□ -1.09
RFFL-209ENST00000581265 FAM90A10PA6NDY2 464 aa8.25□□□□□ -1.09
RFFL-209ENST00000581265 FAM90A7PA6NKC0 464 aa8.25□□□□□ -1.09
RFFL-209ENST00000581265 FAM90A23PA8MXZ1 464 aa8.25□□□□□ -1.09
RFFL-209ENST00000581265 I3L521 148 aa8.25□□□□□ -1.09
RFFL-209ENST00000581265 SC5DO75845 299 aa8.25□□□□□ -1.09
RFFL-209ENST00000581265 LALBAP00709 142 aa8.25□□□□□ -1.09
RFFL-209ENST00000581265 IGLV1-40P01703 118 aa8.25□□□□□ -1.09
RFFL-209ENST00000581265 RCC1P18754 421 aaPredicted RBP8.25□□□□□ -1.09
RFFL-209ENST00000581265 RPS11P62280 158 aaKnown RBP eCLIP8.25□□□□□ -1.09
RFFL-209ENST00000581265 LSAMPQ13449 338 aa8.25□□□□□ -1.09
RFFL-209ENST00000581265 Q499Y3 187 aa8.25□□□□□ -1.09
RFFL-209ENST00000581265 MORN2Q502X0 79 aa8.25□□□□□ -1.09
RFFL-209ENST00000581265 YIF1BQ5BJH7 314 aa8.25□□□□□ -1.09
RFFL-209ENST00000581265 ZNF554Q86TJ5 538 aa8.25□□□□□ -1.09
RFFL-209ENST00000581265 ZNF491Q8N8L2 437 aa8.25□□□□□ -1.09
RFFL-209ENST00000581265 OR1N2Q8NGR9 330 aa8.25□□□□□ -1.09
RFFL-209ENST00000581265 OR13C5Q8NGS8 318 aa8.25□□□□□ -1.09
RFFL-209ENST00000581265 OR4K15Q8NH41 348 aa8.25□□□□□ -1.09
RFFL-209ENST00000581265 OR1L1Q8NH94 360 aa8.25□□□□□ -1.09
RFFL-209ENST00000581265 RDH12Q96NR8 316 aa8.25□□□□□ -1.09
RFFL-209ENST00000581265 TAF9BQ9HBM6 251 aa8.25□□□□□ -1.09
RFFL-209ENST00000581265 OR2S2Q9NQN1 319 aa8.25□□□□□ -1.09
RFFL-209ENST00000581265 MBNL3Q9NUK0 354 aaKnown RBP8.25□□□□□ -1.09
RFFL-209ENST00000581265 CHCHD3Q9NX63 227 aaKnown RBP8.25□□□□□ -1.09
RFFL-209ENST00000581265 DIMT1Q9UNQ2 313 aaKnown RBP8.25□□□□□ -1.09
RFFL-209ENST00000581265 PEX16Q9Y5Y5 336 aa8.25□□□□□ -1.09
RFFL-209ENST00000581265 TENM2Q9NT68 2774 aa8.25□□□□□ -1.09
RFFL-209ENST00000581265 TRBV5-7A0A0A0MS05 114 aa8.24□□□□□ -1.09
RFFL-209ENST00000581265 IRGMA1A4Y4 181 aa8.24□□□□□ -1.09
RFFL-209ENST00000581265 HLA-DRB1P01911 266 aa8.24□□□□□ -1.09
RFFL-209ENST00000581265 OR8U8P0C7N1 319 aa8.24□□□□□ -1.09
RFFL-209ENST00000581265 SLC2A2P11168 524 aaPredicted RBP8.24□□□□□ -1.09
RFFL-209ENST00000581265 FSTP19883 344 aa8.24□□□□□ -1.09
RFFL-209ENST00000581265 FUT3P21217 361 aa8.24□□□□□ -1.09
RFFL-209ENST00000581265 ACTBP60709 375 aa8.24□□□□□ -1.09
RFFL-209ENST00000581265 ADARB1P78563 741 aaKnown RBP8.24□□□□□ -1.09
RFFL-209ENST00000581265 ZNF616Q08AN1 781 aa8.24□□□□□ -1.09
RFFL-209ENST00000581265 MMDQ15546 238 aa8.24□□□□□ -1.09
RFFL-209ENST00000581265 LY6G6FQ5SQ64 297 aa8.24□□□□□ -1.09
RFFL-209ENST00000581265 ASPHD1Q5U4P2 390 aa8.24□□□□□ -1.09
RFFL-209ENST00000581265 SIGIRRQ6IA17 410 aa8.24□□□□□ -1.09
RFFL-209ENST00000581265 TMEM65Q6PI78 240 aa8.24□□□□□ -1.09
RFFL-209ENST00000581265 GLIPR1L1Q6UWM5 242 aa8.24□□□□□ -1.09
RFFL-209ENST00000581265 LYPD6Q86Y78 171 aa8.24□□□□□ -1.09
RFFL-209ENST00000581265 PRR18Q8N4B5 295 aa8.24□□□□□ -1.09
RFFL-209ENST00000581265 ZNF485Q8NCK3 441 aa8.24□□□□□ -1.09
RFFL-209ENST00000581265 OR10V1Q8NGI7 309 aa8.24□□□□□ -1.09
RFFL-209ENST00000581265 MUL1Q969V5 352 aa8.24□□□□□ -1.09
RFFL-209ENST00000581265 RITA1Q96K30 269 aa8.24□□□□□ -1.09
RFFL-209ENST00000581265 ASCL2Q99929 193 aa8.24□□□□□ -1.09
RFFL-209ENST00000581265 OR51J1Q9H342 316 aa8.24□□□□□ -1.09
RFFL-209ENST00000581265 CLEC2DQ9UHP7 191 aa8.24□□□□□ -1.09
RFFL-209ENST00000581265 VSIG4Q9Y279 399 aa8.24□□□□□ -1.09
RFFL-209ENST00000581265 MRPS28Q9Y2Q9 187 aaKnown RBP8.24□□□□□ -1.09
RFFL-209ENST00000581265 EXOSC1Q9Y3B2 195 aaKnown RBP8.24□□□□□ -1.09
RFFL-209ENST00000581265 WSB1Q9Y6I7 421 aa8.24□□□□□ -1.09
RFFL-209ENST00000581265 SMAD5-AS1Q9Y6J3 95 aa8.24□□□□□ -1.09
RFFL-209ENST00000581265 G3V318 75 aa8.23□□□□□ -1.09
RFFL-209ENST00000581265 YPEL1O60688 119 aa8.23□□□□□ -1.09
RFFL-209ENST00000581265 MGMTP16455 207 aa8.23□□□□□ -1.09
RFFL-209ENST00000581265 MYL12AP19105 171 aa8.23□□□□□ -1.09
RFFL-209ENST00000581265 RAB9AP51151 201 aa8.23□□□□□ -1.09
RFFL-209ENST00000581265 HTD2P86397 168 aa8.23□□□□□ -1.09
RFFL-209ENST00000581265 LIN54Q6MZP7 749 aa8.23□□□□□ -1.09
RFFL-209ENST00000581265 ZNF429Q86V71 674 aa8.23□□□□□ -1.09
RFFL-209ENST00000581265 ODF3L1Q8IXM7 274 aa8.23□□□□□ -1.09
RFFL-209ENST00000581265 PQLC1Q8N2U9 271 aa8.23□□□□□ -1.09
RFFL-209ENST00000581265 JAGN1Q8N5M9 183 aa8.23□□□□□ -1.09
RFFL-209ENST00000581265 MINDY2Q8NBR6 621 aa8.23□□□□□ -1.09
RFFL-209ENST00000581265 ZNF555Q8NEP9 628 aa8.23□□□□□ -1.09
RFFL-209ENST00000581265 NPBQ8NG41 125 aa8.23□□□□□ -1.09
RFFL-209ENST00000581265 PGLYRP3Q96LB9 341 aa8.23□□□□□ -1.09
RFFL-209ENST00000581265 YPEL2Q96QA6 119 aa8.23□□□□□ -1.09
RFFL-209ENST00000581265 NABP2Q9BQ15 211 aa8.23□□□□□ -1.09
RFFL-209ENST00000581265 ANKRD60Q9BZ19 345 aa8.23□□□□□ -1.09
RFFL-209ENST00000581265 SELENOIQ9C0D9 397 aa8.23□□□□□ -1.09
RFFL-209ENST00000581265 GNB4Q9HAV0 340 aa8.23□□□□□ -1.09
RFFL-209ENST00000581265 S100A14Q9HCY8 104 aa8.23□□□□□ -1.09
RFFL-209ENST00000581265 KCNIP1Q9NZI2 227 aa8.23□□□□□ -1.09
RFFL-209ENST00000581265 NKX1-2Q9UD57 310 aaPredicted RBP8.23□□□□□ -1.09
RFFL-209ENST00000581265 JPT1Q9UK76 154 aa8.23□□□□□ -1.09
RFFL-209ENST00000581265 LRRC42Q9Y546 428 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms