RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 CYB5AP00167 134 aa5.7□□□□□ -1.5
SMARCE1-217ENST00000580654 TRGV3P03979 118 aa5.7□□□□□ -1.5
SMARCE1-217ENST00000580654 BMI1P35226 326 aa5.7□□□□□ -1.5
SMARCE1-217ENST00000580654 ATP1B3P54709 279 aa5.7□□□□□ -1.5
SMARCE1-217ENST00000580654 MTCP1P56278 107 aa5.7□□□□□ -1.5
SMARCE1-217ENST00000580654 CX3CL1P78423 397 aa5.7□□□□□ -1.5
SMARCE1-217ENST00000580654 PAX5Q02548 391 aa5.7□□□□□ -1.5
SMARCE1-217ENST00000580654 TRIM25Q14258 630 aaKnown RBP5.7□□□□□ -1.5
SMARCE1-217ENST00000580654 MAPRE2Q15555 327 aa5.7□□□□□ -1.5
SMARCE1-217ENST00000580654 ODF4Q2M2E3 257 aa5.7□□□□□ -1.5
SMARCE1-217ENST00000580654 ZNF660Q6AZW8 331 aaPredicted RBP5.7□□□□□ -1.5
SMARCE1-217ENST00000580654 PYHIN1Q6K0P9 492 aa5.7□□□□□ -1.5
SMARCE1-217ENST00000580654 CPOQ8IVL8 374 aa5.7□□□□□ -1.5
SMARCE1-217ENST00000580654 RDH10Q8IZV5 341 aa5.7□□□□□ -1.5
SMARCE1-217ENST00000580654 ZNF645Q8N7E2 425 aa5.7□□□□□ -1.5
SMARCE1-217ENST00000580654 TCTEX1D1Q8N7M0 179 aa5.7□□□□□ -1.5
SMARCE1-217ENST00000580654 NPBQ8NG41 125 aa5.7□□□□□ -1.5
SMARCE1-217ENST00000580654 RNF183Q96D59 192 aa5.7□□□□□ -1.5
SMARCE1-217ENST00000580654 KCTD14Q9BQ13 255 aaPredicted RBP5.7□□□□□ -1.5
SMARCE1-217ENST00000580654 CST11Q9H112 138 aa5.7□□□□□ -1.5
SMARCE1-217ENST00000580654 SLA2Q9H6Q3 261 aa5.7□□□□□ -1.5
SMARCE1-217ENST00000580654 IL1RAPQ9NPH3 570 aa5.7□□□□□ -1.5
SMARCE1-217ENST00000580654 GFOD1Q9NXC2 390 aa5.7□□□□□ -1.5
SMARCE1-217ENST00000580654 IKZF2Q9UKS7 526 aa5.7□□□□□ -1.5
SMARCE1-217ENST00000580654 TP53TG1Q9Y2A0 90 aa5.7□□□□□ -1.5
SMARCE1-217ENST00000580654 V9GYY5 206 aaPredicted RBP5.7□□□□□ -1.5
SMARCE1-217ENST00000580654 CCDC182A6NF36 153 aa5.69□□□□□ -1.5
SMARCE1-217ENST00000580654 H0YJX3 145 aa5.69□□□□□ -1.5
SMARCE1-217ENST00000580654 SDCBPO00560 298 aaPredicted RBP5.69□□□□□ -1.5
SMARCE1-217ENST00000580654 TXNL1O43396 289 aa5.69□□□□□ -1.5
SMARCE1-217ENST00000580654 HTR3BO95264 441 aa5.69□□□□□ -1.5
SMARCE1-217ENST00000580654 FABP3P05413 133 aa5.69□□□□□ -1.5
SMARCE1-217ENST00000580654 IL3RAP26951 378 aa5.69□□□□□ -1.5
SMARCE1-217ENST00000580654 NANOS2P60321 138 aaKnown RBP5.69□□□□□ -1.5
SMARCE1-217ENST00000580654 VAMP2P63027 116 aa5.69□□□□□ -1.5
SMARCE1-217ENST00000580654 DEFA5Q01523 94 aa5.69□□□□□ -1.5
SMARCE1-217ENST00000580654 DEFB135Q30KP9 77 aa5.69□□□□□ -1.5
SMARCE1-217ENST00000580654 DEFB114Q30KQ6 69 aa5.69□□□□□ -1.5
SMARCE1-217ENST00000580654 AKIRIN2Q53H80 203 aa5.69□□□□□ -1.5
SMARCE1-217ENST00000580654 ACTBL2Q562R1 376 aa5.69□□□□□ -1.5
SMARCE1-217ENST00000580654 PAN3Q58A45 887 aaKnown RBP5.69□□□□□ -1.5
SMARCE1-217ENST00000580654 CT45A1Q5HYN5 189 aa5.69□□□□□ -1.5
SMARCE1-217ENST00000580654 SLC35D3Q5M8T2 416 aa5.69□□□□□ -1.5
SMARCE1-217ENST00000580654 FAHD1Q6P587 224 aa5.69□□□□□ -1.5
SMARCE1-217ENST00000580654 UNQ5815/PRO19632Q6UWF5 114 aa5.69□□□□□ -1.5
SMARCE1-217ENST00000580654 PPP1R27Q86WC6 154 aa5.69□□□□□ -1.5
SMARCE1-217ENST00000580654 OR52M1Q8NGK5 317 aa5.69□□□□□ -1.5
SMARCE1-217ENST00000580654 OR5D18Q8NGL1 313 aa5.69□□□□□ -1.5
SMARCE1-217ENST00000580654 CT45A3Q8NHU0 189 aa5.69□□□□□ -1.5
SMARCE1-217ENST00000580654 ADAT3Q96EY9 351 aaPredicted RBP5.69□□□□□ -1.5
SMARCE1-217ENST00000580654 WDR89Q96FK6 387 aaPredicted RBP5.69□□□□□ -1.5
SMARCE1-217ENST00000580654 RDH12Q96NR8 316 aa5.69□□□□□ -1.5
SMARCE1-217ENST00000580654 NIPSNAP1Q9BPW8 284 aa5.69□□□□□ -1.5
SMARCE1-217ENST00000580654 DGCR6LQ9BY27 220 aa5.69□□□□□ -1.5
SMARCE1-217ENST00000580654 ZC4H2Q9NQZ6 224 aa5.69□□□□□ -1.5
SMARCE1-217ENST00000580654 ZNF581Q9P0T4 197 aa5.69□□□□□ -1.5
SMARCE1-217ENST00000580654 ABCD2Q9UBJ2 740 aa5.69□□□□□ -1.5
SMARCE1-217ENST00000580654 ERGIC3Q9Y282 383 aa5.69□□□□□ -1.5
SMARCE1-217ENST00000580654 TNFRSF11BO00300 401 aa5.68□□□□□ -1.5
SMARCE1-217ENST00000580654 SYT7O43581 403 aa5.68□□□□□ -1.5
SMARCE1-217ENST00000580654 LANCL1O43813 399 aa5.68□□□□□ -1.5
SMARCE1-217ENST00000580654 EDF1O60869 148 aaKnown RBP5.68□□□□□ -1.5
SMARCE1-217ENST00000580654 MITFO75030 526 aaPredicted RBP5.68□□□□□ -1.5
SMARCE1-217ENST00000580654 CCNB2O95067 398 aa5.68□□□□□ -1.5
SMARCE1-217ENST00000580654 APOL3O95236 402 aa5.68□□□□□ -1.5
SMARCE1-217ENST00000580654 ATF1P18846 271 aa5.68□□□□□ -1.5
SMARCE1-217ENST00000580654 MAGEA2P43356 314 aa5.68□□□□□ -1.5
SMARCE1-217ENST00000580654 KIR2DS2P43631 304 aa5.68□□□□□ -1.5
SMARCE1-217ENST00000580654 SCAND1P57086 179 aa5.68□□□□□ -1.5
SMARCE1-217ENST00000580654 RPS7P62081 194 aaKnown RBP5.68□□□□□ -1.5
SMARCE1-217ENST00000580654 RBMY1FQ15415 496 aaKnown RBP5.68□□□□□ -1.5
SMARCE1-217ENST00000580654 GUCA2BQ16661 112 aa5.68□□□□□ -1.5
SMARCE1-217ENST00000580654 MOGAT2Q3SYC2 334 aa5.68□□□□□ -1.5
SMARCE1-217ENST00000580654 Q6ZWC4 215 aa5.68□□□□□ -1.5
SMARCE1-217ENST00000580654 LFNGQ8NES3 379 aa5.68□□□□□ -1.5
SMARCE1-217ENST00000580654 CNIH3Q8TBE1 160 aa5.68□□□□□ -1.5
SMARCE1-217ENST00000580654 TEX47Q8TBZ9 253 aa5.68□□□□□ -1.5
SMARCE1-217ENST00000580654 C2CD4CQ8TF44 421 aa5.68□□□□□ -1.5
SMARCE1-217ENST00000580654 ASB17Q8WXJ9 295 aa5.68□□□□□ -1.5
SMARCE1-217ENST00000580654 HOPXQ9BPY8 73 aaPredicted RBP5.68□□□□□ -1.5
SMARCE1-217ENST00000580654 ZNF251Q9BRH9 671 aa5.68□□□□□ -1.5
SMARCE1-217ENST00000580654 BARHL1Q9BZE3 327 aa5.68□□□□□ -1.5
SMARCE1-217ENST00000580654 PARP12Q9H0J9 701 aaKnown RBP5.68□□□□□ -1.5
SMARCE1-217ENST00000580654 FBXL15Q9H469 300 aa5.68□□□□□ -1.5
SMARCE1-217ENST00000580654 GORASP2Q9H8Y8 452 aa5.68□□□□□ -1.5
SMARCE1-217ENST00000580654 SELENOKQ9Y6D0 94 aa5.68□□□□□ -1.5
SMARCE1-217ENST00000580654 DNAH5Q8TE73 4624 aa5.67□□□□□ -1.5
SMARCE1-217ENST00000580654 C13orf42A0A1B0GVH6 325 aa5.67□□□□□ -1.5
SMARCE1-217ENST00000580654 RBMXL2O75526 392 aaKnown RBP5.67□□□□□ -1.5
SMARCE1-217ENST00000580654 KRT36O76013 467 aa5.67□□□□□ -1.5
SMARCE1-217ENST00000580654 OR2A4O95047 310 aa5.67□□□□□ -1.5
SMARCE1-217ENST00000580654 RPP14O95059 124 aaKnown RBP5.67□□□□□ -1.5
SMARCE1-217ENST00000580654 SERPINA3P01011 423 aa5.67□□□□□ -1.5
SMARCE1-217ENST00000580654 CTRB1P17538 263 aa5.67□□□□□ -1.5
SMARCE1-217ENST00000580654 TCTAP57738 103 aa5.67□□□□□ -1.5
SMARCE1-217ENST00000580654 CXCR4P61073 352 aa5.67□□□□□ -1.5
SMARCE1-217ENST00000580654 TMEM267Q0VDI3 215 aaPredicted RBP5.67□□□□□ -1.5
SMARCE1-217ENST00000580654 Q3ZCU0 254 aa5.67□□□□□ -1.5
SMARCE1-217ENST00000580654 CTRB2Q6GPI1 263 aa5.67□□□□□ -1.5
SMARCE1-217ENST00000580654 RAB12Q6IQ22 244 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms