RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 CD34P28906 385 aa11.7□□□□□ -0.54
SKA2-205ENST00000580541 FAUP35544 74 aaKnown RBP11.7□□□□□ -0.54
SKA2-205ENST00000580541 CEACAM6P40199 344 aa11.7□□□□□ -0.54
SKA2-205ENST00000580541 UBE2E1P51965 193 aa11.7□□□□□ -0.54
SKA2-205ENST00000580541 PPP5CP53041 499 aa11.7□□□□□ -0.54
SKA2-205ENST00000580541 LGALS4P56470 323 aa11.7□□□□□ -0.54
SKA2-205ENST00000580541 DGCR2P98153 550 aa11.7□□□□□ -0.54
SKA2-205ENST00000580541 CDK10Q15131 360 aa11.7□□□□□ -0.54
SKA2-205ENST00000580541 LTC4SQ16873 150 aa11.7□□□□□ -0.54
SKA2-205ENST00000580541 TRIQKQ629K1 86 aa11.7□□□□□ -0.54
SKA2-205ENST00000580541 TMEM17Q86X19 198 aa11.7□□□□□ -0.54
SKA2-205ENST00000580541 ABHD12Q8N2K0 398 aa11.7□□□□□ -0.54
SKA2-205ENST00000580541 C8orf31Q8N9H6 132 aa11.7□□□□□ -0.54
SKA2-205ENST00000580541 OR9G1Q8NH87 305 aa11.7□□□□□ -0.54
SKA2-205ENST00000580541 MAFIPQ8WZ33 124 aa11.7□□□□□ -0.54
SKA2-205ENST00000580541 GCDHQ92947 438 aaPredicted RBP11.7□□□□□ -0.54
SKA2-205ENST00000580541 CCDC32Q9BV29 185 aa11.7□□□□□ -0.54
SKA2-205ENST00000580541 CLEC7AQ9BXN2 247 aa11.7□□□□□ -0.54
SKA2-205ENST00000580541 SRRQ9GZT4 340 aa11.7□□□□□ -0.54
SKA2-205ENST00000580541 AKIP1Q9NQ31 210 aa11.7□□□□□ -0.54
SKA2-205ENST00000580541 SLC23A1Q9UHI7 598 aa11.7□□□□□ -0.54
SKA2-205ENST00000580541 RBMX2Q9Y388 322 aaKnown RBP11.7□□□□□ -0.54
SKA2-205ENST00000580541 ABCA2Q9BZC7 2435 aa11.7□□□□□ -0.54
SKA2-205ENST00000580541 ACANP16112 2415 aa11.69□□□□□ -0.54
SKA2-205ENST00000580541 TRBV6-7A0A0A0MS04 114 aa11.69□□□□□ -0.54
SKA2-205ENST00000580541 BET1O15155 118 aa11.69□□□□□ -0.54
SKA2-205ENST00000580541 LY6G6DO95868 133 aa11.69□□□□□ -0.54
SKA2-205ENST00000580541 GDNFP39905 211 aa11.69□□□□□ -0.54
SKA2-205ENST00000580541 RAB7AP51149 207 aa11.69□□□□□ -0.54
SKA2-205ENST00000580541 LOXL3P58215 753 aa11.69□□□□□ -0.54
SKA2-205ENST00000580541 TSPAN5P62079 268 aa11.69□□□□□ -0.54
SKA2-205ENST00000580541 LSAMPQ13449 338 aa11.69□□□□□ -0.54
SKA2-205ENST00000580541 MEF2DQ14814 521 aa11.69□□□□□ -0.54
SKA2-205ENST00000580541 ZNF79Q15937 498 aa11.69□□□□□ -0.54
SKA2-205ENST00000580541 MORN2Q502X0 79 aa11.69□□□□□ -0.54
SKA2-205ENST00000580541 RNASE12Q5GAN4 147 aaKnown RBP11.69□□□□□ -0.54
SKA2-205ENST00000580541 RNASE10Q5GAN6 216 aaKnown RBP11.69□□□□□ -0.54
SKA2-205ENST00000580541 ZNF782Q6ZMW2 699 aaPredicted RBP11.69□□□□□ -0.54
SKA2-205ENST00000580541 TOMM5Q8N4H5 51 aa11.69□□□□□ -0.54
SKA2-205ENST00000580541 LHX4Q969G2 390 aa11.69□□□□□ -0.54
SKA2-205ENST00000580541 TBX15Q96SF7 602 aa11.69□□□□□ -0.54
SKA2-205ENST00000580541 TSC22D3Q99576 134 aa11.69□□□□□ -0.54
SKA2-205ENST00000580541 CABLES2Q9BTV7 478 aa11.69□□□□□ -0.54
SKA2-205ENST00000580541 SUCNR1Q9BXA5 334 aa11.69□□□□□ -0.54
SKA2-205ENST00000580541 SIRT7Q9NRC8 400 aa11.69□□□□□ -0.54
SKA2-205ENST00000580541 AMMECR1Q9Y4X0 333 aaPredicted RBP11.69□□□□□ -0.54
SKA2-205ENST00000580541 TEX15Q9BXT5 2789 aa11.69□□□□□ -0.54
SKA2-205ENST00000580541 CENPXA8MT69 81 aa11.68□□□□□ -0.54
SKA2-205ENST00000580541 ITGB1BP1O14713 200 aa11.68□□□□□ -0.54
SKA2-205ENST00000580541 AKAIN1P0CW23 69 aa11.68□□□□□ -0.54
SKA2-205ENST00000580541 OR5H8P0DN80 308 aa11.68□□□□□ -0.54
SKA2-205ENST00000580541 IL3RAP26951 378 aa11.68□□□□□ -0.54
SKA2-205ENST00000580541 HLA-DMAP28067 261 aa11.68□□□□□ -0.54
SKA2-205ENST00000580541 CEACAM3P40198 252 aa11.68□□□□□ -0.54
SKA2-205ENST00000580541 MIDNQ504T8 468 aa11.68□□□□□ -0.54
SKA2-205ENST00000580541 IGSF11Q5DX21 431 aa11.68□□□□□ -0.54
SKA2-205ENST00000580541 LYSMD2Q8IV50 215 aa11.68□□□□□ -0.54
SKA2-205ENST00000580541 PNKDQ8N490 385 aa11.68□□□□□ -0.54
SKA2-205ENST00000580541 BEND2Q8NDZ0 799 aa11.68□□□□□ -0.54
SKA2-205ENST00000580541 OR2AK2Q8NG84 335 aa11.68□□□□□ -0.54
SKA2-205ENST00000580541 OR11H6Q8NGC7 330 aa11.68□□□□□ -0.54
SKA2-205ENST00000580541 OR52L2PQ8NGH6 319 aa11.68□□□□□ -0.54
SKA2-205ENST00000580541 OR6F1Q8NGZ6 308 aa11.68□□□□□ -0.54
SKA2-205ENST00000580541 TOLLIPQ9H0E2 274 aa11.68□□□□□ -0.54
SKA2-205ENST00000580541 EHFQ9NZC4 300 aa11.68□□□□□ -0.54
SKA2-205ENST00000580541 ZNF69Q9UC07 566 aa11.68□□□□□ -0.54
SKA2-205ENST00000580541 RBM7Q9Y580 266 aaKnown RBP11.68□□□□□ -0.54
SKA2-205ENST00000580541 AKAP9Q99996 3911 aa11.67□□□□□ -0.54
SKA2-205ENST00000580541 IGHV2-26A0A0B4J1V2 119 aa11.67□□□□□ -0.54
SKA2-205ENST00000580541 J3QR06 171 aa11.67□□□□□ -0.54
SKA2-205ENST00000580541 MMP23AO75900 390 aa11.67□□□□□ -0.54
SKA2-205ENST00000580541 SLC22A5O76082 557 aa11.67□□□□□ -0.54
SKA2-205ENST00000580541 RAB3DO95716 219 aa11.67□□□□□ -0.54
SKA2-205ENST00000580541 PMP2P02689 132 aa11.67□□□□□ -0.54
SKA2-205ENST00000580541 ARG1P05089 322 aa11.67□□□□□ -0.54
SKA2-205ENST00000580541 HRH1P35367 487 aa11.67□□□□□ -0.54
SKA2-205ENST00000580541 SRP14P37108 136 aaKnown RBP11.67□□□□□ -0.54
SKA2-205ENST00000580541 DYRK1AQ13627 763 aa11.67□□□□□ -0.54
SKA2-205ENST00000580541 VAX1Q5SQQ9 334 aa11.67□□□□□ -0.54
SKA2-205ENST00000580541 FAM120AOSQ5T036 256 aa11.67□□□□□ -0.54
SKA2-205ENST00000580541 ZNF57Q68EA5 555 aaPredicted RBP11.67□□□□□ -0.54
SKA2-205ENST00000580541 STEAP1BQ6NZ63 245 aa11.67□□□□□ -0.54
SKA2-205ENST00000580541 DHRS11Q6UWP2 260 aa11.67□□□□□ -0.54
SKA2-205ENST00000580541 Q6ZPA2 131 aa11.67□□□□□ -0.54
SKA2-205ENST00000580541 OVCH2Q7RTZ1 564 aa11.67□□□□□ -0.54
SKA2-205ENST00000580541 MFSD4AQ8N468 514 aa11.67□□□□□ -0.54
SKA2-205ENST00000580541 LINC00311Q8N616 119 aa11.67□□□□□ -0.54
SKA2-205ENST00000580541 OR10X1Q8NGY0 326 aa11.67□□□□□ -0.54
SKA2-205ENST00000580541 UBALD1Q8TB05 177 aa11.67□□□□□ -0.54
SKA2-205ENST00000580541 GIMAP1Q8WWP7 306 aa11.67□□□□□ -0.54
SKA2-205ENST00000580541 SNAPC3Q92966 411 aa11.67□□□□□ -0.54
SKA2-205ENST00000580541 BORCS5Q969J3 196 aa11.67□□□□□ -0.54
SKA2-205ENST00000580541 CYYR1Q96J86 154 aa11.67□□□□□ -0.54
SKA2-205ENST00000580541 CDC42EP3Q9UKI2 254 aa11.67□□□□□ -0.54
SKA2-205ENST00000580541 NUP50Q9UKX7 468 aa11.67□□□□□ -0.54
SKA2-205ENST00000580541 PSG11Q9UQ72 335 aa11.67□□□□□ -0.54
SKA2-205ENST00000580541 OTOGQ6ZRI0 2925 aa11.66□□□□□ -0.54
SKA2-205ENST00000580541 IGKV1D-8A0A087WSZ0 117 aa11.66□□□□□ -0.54
SKA2-205ENST00000580541 IGHV3-43A0A0B4J1X8 118 aa11.66□□□□□ -0.54
SKA2-205ENST00000580541 IGHV1-69DA0A0B4J2H0 117 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms