RNA–Protein interactions for RNA: ENST00000580158.1

KPNB1-209, Transcript of karyopherin subunit beta 1, human

TSL 2

Gene KPNB1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KPNB1-209	ENST00000580158	HSF4	Q9ULV5	492 aa		4.39	□□□□□ -1.71
KPNB1-209	ENST00000580158	NACA	E9PAV3	2078 aa		4.39	□□□□□ -1.71
KPNB1-209	ENST00000580158	MEIKIN	A0A087WXM9	373 aa		4.38	□□□□□ -1.71
KPNB1-209	ENST00000580158	TRBV2	A0A0J9YWF9	115 aa		4.38	□□□□□ -1.71
KPNB1-209	ENST00000580158	ACOD1	A6NK06	481 aa		4.38	□□□□□ -1.71
KPNB1-209	ENST00000580158	ANGPT2	O15123	496 aa		4.38	□□□□□ -1.71
KPNB1-209	ENST00000580158	RGS10	O43665	173 aa		4.38	□□□□□ -1.71
KPNB1-209	ENST00000580158	ENTPD6	O75354	484 aa		4.38	□□□□□ -1.71
KPNB1-209	ENST00000580158	GYPB	P06028	91 aa		4.38	□□□□□ -1.71
KPNB1-209	ENST00000580158	H1F0	P07305	194 aa	Known RBP	4.38	□□□□□ -1.71
KPNB1-209	ENST00000580158	LYN	P07948	512 aa		4.38	□□□□□ -1.71
KPNB1-209	ENST00000580158	SCT	P09683	121 aa		4.38	□□□□□ -1.71
KPNB1-209	ENST00000580158	KDELR2	P33947	212 aa		4.38	□□□□□ -1.71
KPNB1-209	ENST00000580158	MAP2K4	P45985	399 aa		4.38	□□□□□ -1.71
KPNB1-209	ENST00000580158	PLGLA	Q15195	96 aa		4.38	□□□□□ -1.71
KPNB1-209	ENST00000580158	MED22	Q15528	200 aa		4.38	□□□□□ -1.71
KPNB1-209	ENST00000580158	C5orf64	Q2M2E5	130 aa		4.38	□□□□□ -1.71
KPNB1-209	ENST00000580158	ZIK1	Q3SY52	487 aa	Predicted RBP	4.38	□□□□□ -1.71
KPNB1-209	ENST00000580158	ZNF367	Q7RTV3	350 aa		4.38	□□□□□ -1.71
KPNB1-209	ENST00000580158	TRPM8	Q7Z2W7	1104 aa		4.38	□□□□□ -1.71
KPNB1-209	ENST00000580158	LINC00596	Q86U02	117 aa		4.38	□□□□□ -1.71
KPNB1-209	ENST00000580158	SLC38A6	Q8IZM9	456 aa		4.38	□□□□□ -1.71
KPNB1-209	ENST00000580158	LYPD1	Q8N2G4	141 aa		4.38	□□□□□ -1.71
KPNB1-209	ENST00000580158	LINC00311	Q8N616	119 aa		4.38	□□□□□ -1.71
KPNB1-209	ENST00000580158	MNS1	Q8NEH6	495 aa		4.38	□□□□□ -1.71
KPNB1-209	ENST00000580158	OR11H2	Q8NH07	326 aa		4.38	□□□□□ -1.71
KPNB1-209	ENST00000580158	RFESD	Q8TAC1	157 aa		4.38	□□□□□ -1.71
KPNB1-209	ENST00000580158	OR51E1	Q8TCB6	317 aa		4.38	□□□□□ -1.71
KPNB1-209	ENST00000580158	COQ2	Q96H96	371 aa		4.38	□□□□□ -1.71
KPNB1-209	ENST00000580158	PAIP2	Q9BPZ3	127 aa	Known RBP	4.38	□□□□□ -1.71
KPNB1-209	ENST00000580158	NDUFAF3	Q9BU61	184 aa		4.38	□□□□□ -1.71
KPNB1-209	ENST00000580158	RBFOX1	Q9NWB1	397 aa	Known RBP	4.38	□□□□□ -1.71
KPNB1-209	ENST00000580158	FAM118A	Q9NWS6	357 aa		4.38	□□□□□ -1.71
KPNB1-209	ENST00000580158	NDUFAF4	Q9P032	175 aa		4.38	□□□□□ -1.71
KPNB1-209	ENST00000580158	LGALS13	Q9UHV8	139 aa		4.38	□□□□□ -1.71
KPNB1-209	ENST00000580158	GSTK1	Q9Y2Q3	226 aa		4.38	□□□□□ -1.71
KPNB1-209	ENST00000580158	KLHDC2	Q9Y2U9	406 aa		4.38	□□□□□ -1.71
KPNB1-209	ENST00000580158	FAM32A	Q9Y421	112 aa	Known RBP	4.38	□□□□□ -1.71
KPNB1-209	ENST00000580158	TNFRSF18	Q9Y5U5	241 aa		4.38	□□□□□ -1.71
KPNB1-209	ENST00000580158	APOB	P04114	4563 aa	Known RBP	4.38	□□□□□ -1.71
KPNB1-209	ENST00000580158	TMEM269	A0A1B0GVZ9	245 aa		4.37	□□□□□ -1.71
KPNB1-209	ENST00000580158	KRTAP23-1	A1A580	65 aa		4.37	□□□□□ -1.71
KPNB1-209	ENST00000580158	NPIPB11	E5RHQ5	1161 aa		4.37	□□□□□ -1.71
KPNB1-209	ENST00000580158	LOC110117498-PIK3R3	F6TDL0	507 aa		4.37	□□□□□ -1.71
KPNB1-209	ENST00000580158		H3BUA1	57 aa		4.37	□□□□□ -1.71
KPNB1-209	ENST00000580158	CGB3	P0DN86	165 aa		4.37	□□□□□ -1.71
KPNB1-209	ENST00000580158	CGB7	P0DN87	165 aa		4.37	□□□□□ -1.71
KPNB1-209	ENST00000580158	CALCB	P10092	127 aa		4.37	□□□□□ -1.71
KPNB1-209	ENST00000580158	FOLR2	P14207	255 aa		4.37	□□□□□ -1.71
KPNB1-209	ENST00000580158	GZMM	P51124	257 aa		4.37	□□□□□ -1.71
KPNB1-209	ENST00000580158	ALDH3A2	P51648	485 aa		4.37	□□□□□ -1.71
KPNB1-209	ENST00000580158	FUT6	P51993	359 aa		4.37	□□□□□ -1.71
KPNB1-209	ENST00000580158	IFFO1	Q0D2I5	559 aa		4.37	□□□□□ -1.71
KPNB1-209	ENST00000580158	CYLC2	Q14093	348 aa	Predicted RBP	4.37	□□□□□ -1.71
KPNB1-209	ENST00000580158	DGCR6	Q14129	220 aa		4.37	□□□□□ -1.71
KPNB1-209	ENST00000580158	ATXN7L3	Q14CW9	347 aa	Predicted RBP	4.37	□□□□□ -1.71
KPNB1-209	ENST00000580158	IFI44L	Q53G44	452 aa		4.37	□□□□□ -1.71
KPNB1-209	ENST00000580158	ZNF57	Q68EA5	555 aa	Predicted RBP	4.37	□□□□□ -1.71
KPNB1-209	ENST00000580158	TMEM42	Q69YG0	159 aa		4.37	□□□□□ -1.71
KPNB1-209	ENST00000580158	SLC37A3	Q8NCC5	494 aa		4.37	□□□□□ -1.71
KPNB1-209	ENST00000580158	CHST4	Q8NCG5	386 aa		4.37	□□□□□ -1.71
KPNB1-209	ENST00000580158	LFNG	Q8NES3	379 aa		4.37	□□□□□ -1.71
KPNB1-209	ENST00000580158	OR13C5	Q8NGS8	318 aa		4.37	□□□□□ -1.71
KPNB1-209	ENST00000580158	OR4A5	Q8NH83	315 aa		4.37	□□□□□ -1.71
KPNB1-209	ENST00000580158	THRSP	Q92748	146 aa		4.37	□□□□□ -1.71
KPNB1-209	ENST00000580158	ASB9	Q96DX5	294 aa		4.37	□□□□□ -1.71
KPNB1-209	ENST00000580158	BORCS8	Q96FH0	119 aa		4.37	□□□□□ -1.71
KPNB1-209	ENST00000580158	RDH12	Q96NR8	316 aa		4.37	□□□□□ -1.71
KPNB1-209	ENST00000580158	AMELY	Q99218	206 aa		4.37	□□□□□ -1.71
KPNB1-209	ENST00000580158	C6orf62	Q9GZU0	229 aa	Predicted RBP	4.37	□□□□□ -1.71
KPNB1-209	ENST00000580158	PPIL3	Q9H2H8	161 aa	Known RBP	4.37	□□□□□ -1.71
KPNB1-209	ENST00000580158	HRH4	Q9H3N8	390 aa		4.37	□□□□□ -1.71
KPNB1-209	ENST00000580158	LINC00574	Q9H8X3	128 aa		4.37	□□□□□ -1.71
KPNB1-209	ENST00000580158	PTTG2	Q9NZH5	202 aa		4.37	□□□□□ -1.71
KPNB1-209	ENST00000580158		A6NIN4	97 aa		4.36	□□□□□ -1.71
KPNB1-209	ENST00000580158	DEGS1	O15121	323 aa		4.36	□□□□□ -1.71
KPNB1-209	ENST00000580158	DEFB4A	O15263	64 aa		4.36	□□□□□ -1.71
KPNB1-209	ENST00000580158	SCAF4	O95104	1147 aa	Known RBP	4.36	□□□□□ -1.71
KPNB1-209	ENST00000580158	AMBP	P02760	352 aa		4.36	□□□□□ -1.71
KPNB1-209	ENST00000580158	SPI1	P17947	270 aa		4.36	□□□□□ -1.71
KPNB1-209	ENST00000580158	RPL35A	P18077	110 aa	Known RBP	4.36	□□□□□ -1.71
KPNB1-209	ENST00000580158	BCL3	P20749	454 aa		4.36	□□□□□ -1.71
KPNB1-209	ENST00000580158	HLA-DMB	P28068	263 aa		4.36	□□□□□ -1.71
KPNB1-209	ENST00000580158	FCGR2B	P31994	310 aa	Predicted RBP	4.36	□□□□□ -1.71
KPNB1-209	ENST00000580158	IFNGR2	P38484	337 aa		4.36	□□□□□ -1.71
KPNB1-209	ENST00000580158	RPP30	P78346	268 aa	Known RBP	4.36	□□□□□ -1.71
KPNB1-209	ENST00000580158	CX3CL1	P78423	397 aa		4.36	□□□□□ -1.71
KPNB1-209	ENST00000580158	NDP	Q00604	133 aa		4.36	□□□□□ -1.71
KPNB1-209	ENST00000580158	TBCE	Q15813	527 aa	Predicted RBP	4.36	□□□□□ -1.71
KPNB1-209	ENST00000580158	RPL13AP3	Q6NVV1	102 aa		4.36	□□□□□ -1.71
KPNB1-209	ENST00000580158	ZNF343	Q6P1L6	599 aa		4.36	□□□□□ -1.71
KPNB1-209	ENST00000580158	RBPMS2	Q6ZRY4	209 aa	Known RBP	4.36	□□□□□ -1.71
KPNB1-209	ENST00000580158	SLC25A48	Q6ZT89	311 aa	Known RBP	4.36	□□□□□ -1.71
KPNB1-209	ENST00000580158	VTCN1	Q7Z7D3	282 aa		4.36	□□□□□ -1.71
KPNB1-209	ENST00000580158	C8orf31	Q8N9H6	132 aa		4.36	□□□□□ -1.71
KPNB1-209	ENST00000580158	POC5	Q8NA72	575 aa		4.36	□□□□□ -1.71
KPNB1-209	ENST00000580158	NPB	Q8NG41	125 aa		4.36	□□□□□ -1.71
KPNB1-209	ENST00000580158	OR52M1	Q8NGK5	317 aa		4.36	□□□□□ -1.71
KPNB1-209	ENST00000580158	OR1L6	Q8NGR2	347 aa		4.36	□□□□□ -1.71
KPNB1-209	ENST00000580158	OR14K1	Q8NGZ2	314 aa		4.36	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms