RNA–Protein interactions for RNA: ENST00000578600.1

PTPRM-208, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 2

Gene PTPRM, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-208ENST00000578600 RYR3Q15413 4870 aa4.02□□□□□ -1.77
PTPRM-208ENST00000578600 A0A0B4J2E0 115 aa4.02□□□□□ -1.77
PTPRM-208ENST00000578600 A0A1B0GWB2 263 aa4.02□□□□□ -1.77
PTPRM-208ENST00000578600 A0A1B0GX12 115 aa4.02□□□□□ -1.77
PTPRM-208ENST00000578600 TCRBV4S1A1TA0A5B7 111 aa4.02□□□□□ -1.77
PTPRM-208ENST00000578600 VGLL3A8MV65 326 aa4.02□□□□□ -1.77
PTPRM-208ENST00000578600 IQCF6A8MYZ5 107 aa4.02□□□□□ -1.77
PTPRM-208ENST00000578600 H3BUX3 64 aa4.02□□□□□ -1.77
PTPRM-208ENST00000578600 SGCEO43556 437 aa4.02□□□□□ -1.77
PTPRM-208ENST00000578600 CHP2O43745 196 aa4.02□□□□□ -1.77
PTPRM-208ENST00000578600 LALBAP00709 142 aa4.02□□□□□ -1.77
PTPRM-208ENST00000578600 IGHG4P01861 327 aa4.02□□□□□ -1.77
PTPRM-208ENST00000578600 CD200P41217 278 aa4.02□□□□□ -1.77
PTPRM-208ENST00000578600 HNRNPA3P51991 378 aaKnown RBP4.02□□□□□ -1.77
PTPRM-208ENST00000578600 RGS8P57771 180 aaPredicted RBP4.02□□□□□ -1.77
PTPRM-208ENST00000578600 C2orf54Q08AI8 447 aa4.02□□□□□ -1.77
PTPRM-208ENST00000578600 FUT5Q11128 374 aa4.02□□□□□ -1.77
PTPRM-208ENST00000578600 PAN3Q58A45 887 aaKnown RBP4.02□□□□□ -1.77
PTPRM-208ENST00000578600 C6orf226Q5I0X4 101 aa4.02□□□□□ -1.77
PTPRM-208ENST00000578600 RNLSQ5VYX0 342 aa4.02□□□□□ -1.77
PTPRM-208ENST00000578600 REEP3Q6NUK4 255 aa4.02□□□□□ -1.77
PTPRM-208ENST00000578600 DHRS4L2Q6PKH6 230 aa4.02□□□□□ -1.77
PTPRM-208ENST00000578600 VMO1Q7Z5L0 202 aa4.02□□□□□ -1.77
PTPRM-208ENST00000578600 GTSCR1Q86UQ5 136 aa4.02□□□□□ -1.77
PTPRM-208ENST00000578600 C10orf107Q8IVU9 208 aa4.02□□□□□ -1.77
PTPRM-208ENST00000578600 ZNF485Q8NCK3 441 aa4.02□□□□□ -1.77
PTPRM-208ENST00000578600 MNS1Q8NEH6 495 aa4.02□□□□□ -1.77
PTPRM-208ENST00000578600 RPS4Y2Q8TD47 263 aa4.02□□□□□ -1.77
PTPRM-208ENST00000578600 ITCHQ96J02 903 aa4.02□□□□□ -1.77
PTPRM-208ENST00000578600 C1orf50Q9BV19 199 aa4.02□□□□□ -1.77
PTPRM-208ENST00000578600 POLR2J2Q9GZM3 115 aaKnown RBP4.02□□□□□ -1.77
PTPRM-208ENST00000578600 POLR2J3Q9H1A7 115 aaKnown RBP4.02□□□□□ -1.77
PTPRM-208ENST00000578600 INIPQ9NRY2 104 aa4.02□□□□□ -1.77
PTPRM-208ENST00000578600 IGHV3-35A0A0C4DH35 117 aa4.01□□□□□ -1.77
PTPRM-208ENST00000578600 ZNF705EA8MWA4 302 aaPredicted RBP4.01□□□□□ -1.77
PTPRM-208ENST00000578600 M0QZK8 103 aa4.01□□□□□ -1.77
PTPRM-208ENST00000578600 CYB5R3P00387 301 aaPredicted RBP4.01□□□□□ -1.77
PTPRM-208ENST00000578600 LHBP01229 141 aa4.01□□□□□ -1.77
PTPRM-208ENST00000578600 BCHEP06276 602 aa4.01□□□□□ -1.77
PTPRM-208ENST00000578600 DDOSTP39656 456 aa4.01□□□□□ -1.77
PTPRM-208ENST00000578600 RBM34P42696 430 aaKnown RBP4.01□□□□□ -1.77
PTPRM-208ENST00000578600 VDAC2P45880 294 aaPredicted RBP4.01□□□□□ -1.77
PTPRM-208ENST00000578600 INSL3P51460 131 aa4.01□□□□□ -1.77
PTPRM-208ENST00000578600 LSM6P62312 80 aaKnown RBP4.01□□□□□ -1.77
PTPRM-208ENST00000578600 ERVK-25P63136 954 aa4.01□□□□□ -1.77
PTPRM-208ENST00000578600 AQP6Q13520 282 aa4.01□□□□□ -1.77
PTPRM-208ENST00000578600 RCN1Q15293 331 aa4.01□□□□□ -1.77
PTPRM-208ENST00000578600 OR1Q1Q15612 314 aa4.01□□□□□ -1.77
PTPRM-208ENST00000578600 ATAD3CQ5T2N8 411 aa4.01□□□□□ -1.77
PTPRM-208ENST00000578600 H2BFWTQ7Z2G1 175 aa4.01□□□□□ -1.77
PTPRM-208ENST00000578600 FTMTQ8N4E7 242 aa4.01□□□□□ -1.77
PTPRM-208ENST00000578600 C11orf42Q8N5U0 333 aa4.01□□□□□ -1.77
PTPRM-208ENST00000578600 COMMD1Q8N668 190 aa4.01□□□□□ -1.77
PTPRM-208ENST00000578600 LY6G5BQ8NDX9 201 aa4.01□□□□□ -1.77
PTPRM-208ENST00000578600 ACOT11Q8WXI4 607 aaPredicted RBP4.01□□□□□ -1.77
PTPRM-208ENST00000578600 ITFG2Q969R8 447 aa4.01□□□□□ -1.77
PTPRM-208ENST00000578600 ISOC1Q96CN7 298 aa4.01□□□□□ -1.77
PTPRM-208ENST00000578600 MALSU1Q96EH3 234 aa4.01□□□□□ -1.77
PTPRM-208ENST00000578600 SEC22AQ96IW7 307 aa4.01□□□□□ -1.77
PTPRM-208ENST00000578600 NOL4LQ96MY1 436 aaPredicted RBP4.01□□□□□ -1.77
PTPRM-208ENST00000578600 ISG20L2Q9H9L3 353 aaKnown RBP4.01□□□□□ -1.77
PTPRM-208ENST00000578600 TPT1P8Q9HAU6 139 aa4.01□□□□□ -1.77
PTPRM-208ENST00000578600 ABCB9Q9NP78 766 aa4.01□□□□□ -1.77
PTPRM-208ENST00000578600 SLC2A8Q9NY64 477 aa4.01□□□□□ -1.77
PTPRM-208ENST00000578600 TAS2R5Q9NYW4 299 aa4.01□□□□□ -1.77
PTPRM-208ENST00000578600 SLC17A7Q9P2U7 560 aa4.01□□□□□ -1.77
PTPRM-208ENST00000578600 RABL2AQ9UBK7 228 aaPredicted RBP4.01□□□□□ -1.77
PTPRM-208ENST00000578600 SOX21Q9Y651 276 aaPredicted RBP4.01□□□□□ -1.77
PTPRM-208ENST00000578600 TET2Q6N021 2002 aaPredicted RBP4□□□□□ -1.77
PTPRM-208ENST00000578600 IGKV1D-42A0A075B6H8 117 aa4□□□□□ -1.77
PTPRM-208ENST00000578600 A0A1B0GU03 582 aa4□□□□□ -1.77
PTPRM-208ENST00000578600 WI2-2373I1.2A0A1W2PRP0 233 aa4□□□□□ -1.77
PTPRM-208ENST00000578600 TRPC5OSA6NMA1 111 aa4□□□□□ -1.77
PTPRM-208ENST00000578600 EVPLLA8MZ36 301 aa4□□□□□ -1.77
PTPRM-208ENST00000578600 XKRYO14609 159 aa4□□□□□ -1.77
PTPRM-208ENST00000578600 ASAH2BP0C7U1 165 aa4□□□□□ -1.77
PTPRM-208ENST00000578600 TROVE2P10155 538 aaKnown RBP eCLIP4□□□□□ -1.77
PTPRM-208ENST00000578600 CD28P10747 220 aa4□□□□□ -1.77
PTPRM-208ENST00000578600 IDO1P14902 403 aa4□□□□□ -1.77
PTPRM-208ENST00000578600 CASQ1P31415 396 aa4□□□□□ -1.77
PTPRM-208ENST00000578600 MYCNOSP40205 109 aa4□□□□□ -1.77
PTPRM-208ENST00000578600 KIR2DS2P43631 304 aa4□□□□□ -1.77
PTPRM-208ENST00000578600 DYNLT3P51808 116 aa4□□□□□ -1.77
PTPRM-208ENST00000578600 OR8G1Q15617 311 aa4□□□□□ -1.77
PTPRM-208ENST00000578600 Q1RN00 199 aa4□□□□□ -1.77
PTPRM-208ENST00000578600 TEX36Q5VZQ5 186 aa4□□□□□ -1.77
PTPRM-208ENST00000578600 UQCC3Q6UW78 93 aa4□□□□□ -1.77
PTPRM-208ENST00000578600 Q6ZR03 302 aa4□□□□□ -1.77
PTPRM-208ENST00000578600 EGFL6Q8IUX8 553 aa4□□□□□ -1.77
PTPRM-208ENST00000578600 CYB561A3Q8NBI2 242 aa4□□□□□ -1.77
PTPRM-208ENST00000578600 SLC26A10Q8NG04 563 aa4□□□□□ -1.77
PTPRM-208ENST00000578600 OR52H1Q8NGJ2 320 aa4□□□□□ -1.77
PTPRM-208ENST00000578600 ZNF420Q8TAQ5 688 aaPredicted RBP4□□□□□ -1.77
PTPRM-208ENST00000578600 IFT81Q8WYA0 676 aa4□□□□□ -1.77
PTPRM-208ENST00000578600 ANP32BQ92688 251 aaKnown RBP4□□□□□ -1.77
PTPRM-208ENST00000578600 FGGYQ96C11 551 aa4□□□□□ -1.77
PTPRM-208ENST00000578600 RNF2Q99496 336 aa4□□□□□ -1.77
PTPRM-208ENST00000578600 ECSITQ9BQ95 431 aa4□□□□□ -1.77
PTPRM-208ENST00000578600 FAM192AQ9GZU8 254 aa4□□□□□ -1.77
PTPRM-208ENST00000578600 HDHD2Q9H0R4 259 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms