RNA–Protein interactions for RNA: ENST00000575333.5

TOM1L1-220, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 1 (best) BASIC

Gene TOM1L1, Length 1,849 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-220ENST00000575333 LCN10Q6JVE6 187 aa6.85□□□□□ -1.31
TOM1L1-220ENST00000575333 OLIG3Q7RTU3 272 aa6.85□□□□□ -1.31
TOM1L1-220ENST00000575333 CDC20BQ86Y33 519 aa6.85□□□□□ -1.31
TOM1L1-220ENST00000575333 OR52E2Q8NGJ4 325 aa6.85□□□□□ -1.31
TOM1L1-220ENST00000575333 OR5P3Q8WZ94 311 aa6.85□□□□□ -1.31
TOM1L1-220ENST00000575333 C5orf30Q96GV9 206 aa6.85□□□□□ -1.31
TOM1L1-220ENST00000575333 C4orf45Q96LM5 186 aa6.85□□□□□ -1.31
TOM1L1-220ENST00000575333 PRSS27Q9BQR3 290 aa6.85□□□□□ -1.31
TOM1L1-220ENST00000575333 TM2D1Q9BX74 207 aa6.85□□□□□ -1.31
TOM1L1-220ENST00000575333 QTRT1Q9BXR0 403 aaKnown RBP6.85□□□□□ -1.31
TOM1L1-220ENST00000575333 COMMD5Q9GZQ3 224 aa6.85□□□□□ -1.31
TOM1L1-220ENST00000575333 BPIFA1Q9NP55 256 aa6.85□□□□□ -1.31
TOM1L1-220ENST00000575333 CYSLTR1Q9Y271 337 aa6.85□□□□□ -1.31
TOM1L1-220ENST00000575333 RCL1Q9Y2P8 373 aaKnown RBP6.85□□□□□ -1.31
TOM1L1-220ENST00000575333 UFC1Q9Y3C8 167 aa6.85□□□□□ -1.31
TOM1L1-220ENST00000575333 SCN2AQ99250 2005 aa6.85□□□□□ -1.31
TOM1L1-220ENST00000575333 NUP210Q8TEM1 1887 aaPredicted RBP6.85□□□□□ -1.31
TOM1L1-220ENST00000575333 A0A1B0GUS0 222 aa6.85□□□□□ -1.31
TOM1L1-220ENST00000575333 LOC102725191A0A1B0GVB3 256 aa6.85□□□□□ -1.31
TOM1L1-220ENST00000575333 MED19A0JLT2 244 aaPredicted RBP6.85□□□□□ -1.31
TOM1L1-220ENST00000575333 FAM231BA6NCW3 169 aa6.85□□□□□ -1.31
TOM1L1-220ENST00000575333 TMPRSS2O15393 492 aa6.85□□□□□ -1.31
TOM1L1-220ENST00000575333 MLNRO43193 412 aa6.85□□□□□ -1.31
TOM1L1-220ENST00000575333 NDUFB2O95178 105 aa6.85□□□□□ -1.31
TOM1L1-220ENST00000575333 KLK1P06870 262 aa6.85□□□□□ -1.31
TOM1L1-220ENST00000575333 THBDP07204 575 aa6.85□□□□□ -1.31
TOM1L1-220ENST00000575333 ADH4P08319 380 aa6.85□□□□□ -1.31
TOM1L1-220ENST00000575333 H2BFMP0C1H6 154 aa6.85□□□□□ -1.31
TOM1L1-220ENST00000575333 IGFBP3P17936 291 aaPredicted RBP6.85□□□□□ -1.31
TOM1L1-220ENST00000575333 PSMB3P49720 205 aa6.85□□□□□ -1.31
TOM1L1-220ENST00000575333 PRSS53Q2L4Q9 553 aa6.85□□□□□ -1.31
TOM1L1-220ENST00000575333 OR4C11Q6IEV9 310 aa6.85□□□□□ -1.31
TOM1L1-220ENST00000575333 LCN15Q6UWW0 184 aa6.85□□□□□ -1.31
TOM1L1-220ENST00000575333 LINC00114Q6XXX2 140 aa6.85□□□□□ -1.31
TOM1L1-220ENST00000575333 SULF2Q8IWU5 870 aa6.85□□□□□ -1.31
TOM1L1-220ENST00000575333 GVQW1Q8N7I0 195 aa6.85□□□□□ -1.31
TOM1L1-220ENST00000575333 SCCPDHQ8NBX0 429 aa6.85□□□□□ -1.31
TOM1L1-220ENST00000575333 PPTC7Q8NI37 304 aa6.85□□□□□ -1.31
TOM1L1-220ENST00000575333 VSTM2AQ8TAG5 236 aa6.85□□□□□ -1.31
TOM1L1-220ENST00000575333 MRPL30Q8TCC3 161 aaKnown RBP6.85□□□□□ -1.31
TOM1L1-220ENST00000575333 MBD6Q96DN6 1003 aa6.85□□□□□ -1.31
TOM1L1-220ENST00000575333 SCARF2Q96GP6 870 aaPredicted RBP6.85□□□□□ -1.31
TOM1L1-220ENST00000575333 WDR61Q9GZS3 305 aaKnown RBP6.85□□□□□ -1.31
TOM1L1-220ENST00000575333 MS4A5Q9H3V2 200 aa6.85□□□□□ -1.31
TOM1L1-220ENST00000575333 PRDM6Q9NQX0 595 aa6.85□□□□□ -1.31
TOM1L1-220ENST00000575333 DHDHQ9UQ10 334 aa6.85□□□□□ -1.31
TOM1L1-220ENST00000575333 CENPVL1A0A0U1RR11 272 aa6.84□□□□□ -1.31
TOM1L1-220ENST00000575333 hADV38S2A0JD32 116 aa6.84□□□□□ -1.31
TOM1L1-220ENST00000575333 GRIFINA4D1Z8 144 aa6.84□□□□□ -1.31
TOM1L1-220ENST00000575333 LRP5LA4QPB2 252 aa6.84□□□□□ -1.31
TOM1L1-220ENST00000575333 KIAA1324LA8MWY0 1029 aaPredicted RBP6.84□□□□□ -1.31
TOM1L1-220ENST00000575333 SH2D1BO14796 132 aa6.84□□□□□ -1.31
TOM1L1-220ENST00000575333 CA2P00918 260 aa6.84□□□□□ -1.31
TOM1L1-220ENST00000575333 TTRP02766 147 aa6.84□□□□□ -1.31
TOM1L1-220ENST00000575333 WNT2P09544 360 aa6.84□□□□□ -1.31
TOM1L1-220ENST00000575333 ZNF17P17021 662 aa6.84□□□□□ -1.31
TOM1L1-220ENST00000575333 CCKBRP32239 447 aa6.84□□□□□ -1.31
TOM1L1-220ENST00000575333 ID1P41134 155 aa6.84□□□□□ -1.31
TOM1L1-220ENST00000575333 TCL1AP56279 114 aa6.84□□□□□ -1.31
TOM1L1-220ENST00000575333 TBR1Q16650 682 aa6.84□□□□□ -1.31
TOM1L1-220ENST00000575333 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.84□□□□□ -1.31
TOM1L1-220ENST00000575333 AGTRAPQ6RW13 159 aa6.84□□□□□ -1.31
TOM1L1-220ENST00000575333 ARHGEF39Q8N4T4 335 aa6.84□□□□□ -1.31
TOM1L1-220ENST00000575333 SMIM20Q8N5G0 67 aa6.84□□□□□ -1.31
TOM1L1-220ENST00000575333 TTC9CQ8N5M4 171 aa6.84□□□□□ -1.31
TOM1L1-220ENST00000575333 SPIN2AQ99865 258 aa6.84□□□□□ -1.31
TOM1L1-220ENST00000575333 SPIN2BQ9BPZ2 258 aa6.84□□□□□ -1.31
TOM1L1-220ENST00000575333 MRPL18Q9H0U6 180 aaKnown RBP6.84□□□□□ -1.31
TOM1L1-220ENST00000575333 ATG10Q9H0Y0 220 aa6.84□□□□□ -1.31
TOM1L1-220ENST00000575333 MS4A6AQ9H2W1 248 aa6.84□□□□□ -1.31
TOM1L1-220ENST00000575333 KCNK15Q9H427 330 aa6.84□□□□□ -1.31
TOM1L1-220ENST00000575333 ZNF665Q9H7R5 613 aa6.84□□□□□ -1.31
TOM1L1-220ENST00000575333 FBRSQ9HAH7 460 aa6.84□□□□□ -1.31
TOM1L1-220ENST00000575333 MTCH1Q9NZJ7 389 aa6.84□□□□□ -1.31
TOM1L1-220ENST00000575333 CD207Q9UJ71 328 aa6.84□□□□□ -1.31
TOM1L1-220ENST00000575333 ZNF443Q9Y2A4 671 aaPredicted RBP6.84□□□□□ -1.31
TOM1L1-220ENST00000575333 IER3IP1Q9Y5U9 82 aa6.84□□□□□ -1.31
TOM1L1-220ENST00000575333 TEX48A0A1B0GUV7 120 aa6.83□□□□□ -1.32
TOM1L1-220ENST00000575333 SPAARA0A1B0GVQ0 90 aa6.83□□□□□ -1.32
TOM1L1-220ENST00000575333 TMEM213A2RRL7 107 aa6.83□□□□□ -1.32
TOM1L1-220ENST00000575333 IGLL1P15814 213 aa6.83□□□□□ -1.32
TOM1L1-220ENST00000575333 PGCP20142 388 aa6.83□□□□□ -1.32
TOM1L1-220ENST00000575333 CRYBB3P26998 211 aa6.83□□□□□ -1.32
TOM1L1-220ENST00000575333 MRPS34P82930 218 aaKnown RBP6.83□□□□□ -1.32
TOM1L1-220ENST00000575333 SERF2P84101 59 aa6.83□□□□□ -1.32
TOM1L1-220ENST00000575333 ZNF324BQ6AW86 544 aaPredicted RBP6.83□□□□□ -1.32
TOM1L1-220ENST00000575333 ASCL4Q6XD76 172 aa6.83□□□□□ -1.32
TOM1L1-220ENST00000575333 AMZ2Q86W34 360 aa6.83□□□□□ -1.32
TOM1L1-220ENST00000575333 ZBTB34Q8NCN2 500 aa6.83□□□□□ -1.32
TOM1L1-220ENST00000575333 OR51T1Q8NGJ9 327 aa6.83□□□□□ -1.32
TOM1L1-220ENST00000575333 OR10AG1Q8NH19 301 aa6.83□□□□□ -1.32
TOM1L1-220ENST00000575333 RERGQ96A58 199 aaPredicted RBP6.83□□□□□ -1.32
TOM1L1-220ENST00000575333 PTH2Q96A98 100 aa6.83□□□□□ -1.32
TOM1L1-220ENST00000575333 KLHDC7BQ96G42 594 aa6.83□□□□□ -1.32
TOM1L1-220ENST00000575333 PCED1BQ96HM7 432 aa6.83□□□□□ -1.32
TOM1L1-220ENST00000575333 GNB1LQ9BYB4 327 aa6.83□□□□□ -1.32
TOM1L1-220ENST00000575333 C11orf1Q9H5F2 150 aa6.83□□□□□ -1.32
TOM1L1-220ENST00000575333 GP6Q9HCN6 339 aa6.83□□□□□ -1.32
TOM1L1-220ENST00000575333 NGBQ9NPG2 151 aa6.83□□□□□ -1.32
TOM1L1-220ENST00000575333 RARRES3Q9UL19 164 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms