RNA–Protein interactions for RNA: ENST00000574218.1

CTNS-208, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 5

Gene CTNS, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-208ENST00000574218 TPSG1Q9NRR2 321 aa9.16□□□□□ -0.94
CTNS-208ENST00000574218 TRAPPC2LQ9UL33 140 aa9.16□□□□□ -0.94
CTNS-208ENST00000574218 ING4Q9UNL4 249 aa9.16□□□□□ -0.94
CTNS-208ENST00000574218 J3QLW9 94 aa9.15□□□□□ -0.94
CTNS-208ENST00000574218 GABRPO00591 440 aa9.15□□□□□ -0.94
CTNS-208ENST00000574218 SLC16A6O15403 523 aa9.15□□□□□ -0.94
CTNS-208ENST00000574218 ZNF19P17023 458 aa9.15□□□□□ -0.94
CTNS-208ENST00000574218 CALB2P22676 271 aa9.15□□□□□ -0.94
CTNS-208ENST00000574218 FLOT2Q14254 428 aa9.15□□□□□ -0.94
CTNS-208ENST00000574218 MPV17LQ2QL34 196 aa9.15□□□□□ -0.94
CTNS-208ENST00000574218 ZNF660Q6AZW8 331 aaPredicted RBP9.15□□□□□ -0.94
CTNS-208ENST00000574218 LCN12Q6JVE5 192 aa9.15□□□□□ -0.94
CTNS-208ENST00000574218 TRAT1Q6PIZ9 186 aa9.15□□□□□ -0.94
CTNS-208ENST00000574218 OR8J1Q8NGP2 316 aa9.15□□□□□ -0.94
CTNS-208ENST00000574218 OR52N1Q8NH53 320 aa9.15□□□□□ -0.94
CTNS-208ENST00000574218 LINC00476Q8WZB0 136 aa9.15□□□□□ -0.94
CTNS-208ENST00000574218 RBMXL1Q96E39 390 aaKnown RBP9.15□□□□□ -0.94
CTNS-208ENST00000574218 MS4A10Q96PG2 267 aa9.15□□□□□ -0.94
CTNS-208ENST00000574218 THTPAQ9BU02 230 aa9.15□□□□□ -0.94
CTNS-208ENST00000574218 SLA2Q9H6Q3 261 aa9.15□□□□□ -0.94
CTNS-208ENST00000574218 IFT22Q9H7X7 185 aa9.15□□□□□ -0.94
CTNS-208ENST00000574218 RETNQ9HD89 108 aa9.15□□□□□ -0.94
CTNS-208ENST00000574218 PAK1IP1Q9NWT1 392 aaPredicted RBP9.15□□□□□ -0.94
CTNS-208ENST00000574218 CEPT1Q9Y6K0 416 aa9.15□□□□□ -0.94
CTNS-208ENST00000574218 SHISA3A0PJX4 238 aa9.14□□□□□ -0.95
CTNS-208ENST00000574218 OR4C45A6NMZ5 311 aa9.14□□□□□ -0.95
CTNS-208ENST00000574218 G3V2T6 193 aa9.14□□□□□ -0.95
CTNS-208ENST00000574218 SERPINA2P20848 420 aa9.14□□□□□ -0.95
CTNS-208ENST00000574218 CNTFRP26992 372 aa9.14□□□□□ -0.95
CTNS-208ENST00000574218 EPHA2P29317 976 aa9.14□□□□□ -0.95
CTNS-208ENST00000574218 VHLP40337 213 aa9.14□□□□□ -0.95
CTNS-208ENST00000574218 RBM11P57052 281 aaKnown RBP9.14□□□□□ -0.95
CTNS-208ENST00000574218 LRRC36Q1X8D7 754 aa9.14□□□□□ -0.95
CTNS-208ENST00000574218 ACTBL2Q562R1 376 aa9.14□□□□□ -0.95
CTNS-208ENST00000574218 CT45A1Q5HYN5 189 aa9.14□□□□□ -0.95
CTNS-208ENST00000574218 STEAP3Q658P3 488 aa9.14□□□□□ -0.95
CTNS-208ENST00000574218 UNQ5815/PRO19632Q6UWF5 114 aa9.14□□□□□ -0.95
CTNS-208ENST00000574218 PARP16Q8N5Y8 322 aa9.14□□□□□ -0.95
CTNS-208ENST00000574218 ZNF439Q8NDP4 499 aa9.14□□□□□ -0.95
CTNS-208ENST00000574218 CT45A3Q8NHU0 189 aa9.14□□□□□ -0.95
CTNS-208ENST00000574218 C4orf36Q96KX1 117 aa9.14□□□□□ -0.95
CTNS-208ENST00000574218 ABHD14AQ9BUJ0 271 aa9.14□□□□□ -0.95
CTNS-208ENST00000574218 RIBC2Q9H4K1 309 aa9.14□□□□□ -0.95
CTNS-208ENST00000574218 RANGRFQ9HD47 186 aaPredicted RBP9.14□□□□□ -0.95
CTNS-208ENST00000574218 C13orf42A0A1B0GVH6 325 aa9.13□□□□□ -0.95
CTNS-208ENST00000574218 MCRIP1C9JLW8 97 aa9.13□□□□□ -0.95
CTNS-208ENST00000574218 GEMIN2O14893 280 aaKnown RBP9.13□□□□□ -0.95
CTNS-208ENST00000574218 SOX15O60248 233 aa9.13□□□□□ -0.95
CTNS-208ENST00000574218 RGS11O94810 467 aa9.13□□□□□ -0.95
CTNS-208ENST00000574218 CDRT1O95170 752 aa9.13□□□□□ -0.95
CTNS-208ENST00000574218 HBZP02008 142 aa9.13□□□□□ -0.95
CTNS-208ENST00000574218 MT-ND4P03905 459 aa9.13□□□□□ -0.95
CTNS-208ENST00000574218 TRGV3P03979 118 aa9.13□□□□□ -0.95
CTNS-208ENST00000574218 ZNF134P52741 427 aa9.13□□□□□ -0.95
CTNS-208ENST00000574218 TATDN3Q17R31 274 aa9.13□□□□□ -0.95
CTNS-208ENST00000574218 NHLRC3Q5JS37 347 aa9.13□□□□□ -0.95
CTNS-208ENST00000574218 SYT6Q5T7P8 510 aaPredicted RBP9.13□□□□□ -0.95
CTNS-208ENST00000574218 RNLSQ5VYX0 342 aa9.13□□□□□ -0.95
CTNS-208ENST00000574218 ZNF497Q6ZNH5 498 aa9.13□□□□□ -0.95
CTNS-208ENST00000574218 PPP1R27Q86WC6 154 aa9.13□□□□□ -0.95
CTNS-208ENST00000574218 Q8N402 240 aa9.13□□□□□ -0.95
CTNS-208ENST00000574218 NPBQ8NG41 125 aa9.13□□□□□ -0.95
CTNS-208ENST00000574218 OR5AK2Q8NH90 309 aa9.13□□□□□ -0.95
CTNS-208ENST00000574218 MRPS24Q96EL2 167 aaKnown RBP9.13□□□□□ -0.95
CTNS-208ENST00000574218 MRPL20Q9BYC9 149 aaKnown RBP9.13□□□□□ -0.95
CTNS-208ENST00000574218 SPACA1Q9HBV2 294 aa9.13□□□□□ -0.95
CTNS-208ENST00000574218 OR2S2Q9NQN1 319 aa9.13□□□□□ -0.95
CTNS-208ENST00000574218 ZNF355PQ9NSJ1 428 aa9.13□□□□□ -0.95
CTNS-208ENST00000574218 IMPAD1Q9NX62 359 aa9.13□□□□□ -0.95
CTNS-208ENST00000574218 ETAA1Q9NY74 926 aa9.13□□□□□ -0.95
CTNS-208ENST00000574218 KCNIP1Q9NZI2 227 aa9.13□□□□□ -0.95
CTNS-208ENST00000574218 FRAS1Q86XX4 4008 aa9.13□□□□□ -0.95
CTNS-208ENST00000574218 TMEM212A6NML5 194 aa9.12□□□□□ -0.95
CTNS-208ENST00000574218 ZNF780AO75290 641 aaPredicted RBP9.12□□□□□ -0.95
CTNS-208ENST00000574218 TPPPO94811 219 aa9.12□□□□□ -0.95
CTNS-208ENST00000574218 NDUFA3O95167 84 aa9.12□□□□□ -0.95
CTNS-208ENST00000574218 CD2P06729 351 aa9.12□□□□□ -0.95
CTNS-208ENST00000574218 CRIP2P52943 208 aaPredicted RBP9.12□□□□□ -0.95
CTNS-208ENST00000574218 PPP3R1P63098 170 aa9.12□□□□□ -0.95
CTNS-208ENST00000574218 NDPQ00604 133 aa9.12□□□□□ -0.95
CTNS-208ENST00000574218 MOGAT2Q3SYC2 334 aa9.12□□□□□ -0.95
CTNS-208ENST00000574218 CD200R1LQ6Q8B3 271 aa9.12□□□□□ -0.95
CTNS-208ENST00000574218 ZDHHC13Q8IUH4 622 aa9.12□□□□□ -0.95
CTNS-208ENST00000574218 ACBD7Q8N6N7 88 aa9.12□□□□□ -0.95
CTNS-208ENST00000574218 OR51A2Q8NGJ7 313 aa9.12□□□□□ -0.95
CTNS-208ENST00000574218 OR9G4Q8NGQ1 327 aa9.12□□□□□ -0.95
CTNS-208ENST00000574218 OR4K15Q8NH41 348 aa9.12□□□□□ -0.95
CTNS-208ENST00000574218 OR1L1Q8NH94 360 aa9.12□□□□□ -0.95
CTNS-208ENST00000574218 PELI1Q96FA3 418 aa9.12□□□□□ -0.95
CTNS-208ENST00000574218 RHOVQ96L33 236 aa9.12□□□□□ -0.95
CTNS-208ENST00000574218 NABP2Q9BQ15 211 aa9.12□□□□□ -0.95
CTNS-208ENST00000574218 JAM3Q9BX67 310 aa9.12□□□□□ -0.95
CTNS-208ENST00000574218 HIPK2Q9H2X6 1198 aa9.12□□□□□ -0.95
CTNS-208ENST00000574218 FBXL15Q9H469 300 aa9.12□□□□□ -0.95
CTNS-208ENST00000574218 IL36GQ9NZH8 169 aa9.12□□□□□ -0.95
CTNS-208ENST00000574218 CNOT2Q9NZN8 540 aaKnown RBP9.12□□□□□ -0.95
CTNS-208ENST00000574218 ZNF581Q9P0T4 197 aa9.12□□□□□ -0.95
CTNS-208ENST00000574218 FBXO7Q9Y3I1 522 aa9.12□□□□□ -0.95
CTNS-208ENST00000574218 ANKRD34BA5PLL1 514 aa9.11□□□□□ -0.95
CTNS-208ENST00000574218 SNTNA6NMZ2 147 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms