RNA–Protein interactions for RNA: ENST00000574022.1

CHD3-217, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 103 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-217ENST00000574022 ITLN2Q8WWU7 325 aaPredicted RBP1.37□□□□□ -2.19
CHD3-217ENST00000574022 AP3S1Q92572 193 aa1.37□□□□□ -2.19
CHD3-217ENST00000574022 ACY3Q96HD9 319 aa1.37□□□□□ -2.19
CHD3-217ENST00000574022 REEP6Q96HR9 211 aa1.37□□□□□ -2.19
CHD3-217ENST00000574022 DIRAS2Q96HU8 199 aa1.37□□□□□ -2.19
CHD3-217ENST00000574022 ANKRD36BP1Q96IX9 119 aa1.37□□□□□ -2.19
CHD3-217ENST00000574022 SLC35G5Q96KT7 338 aa1.37□□□□□ -2.19
CHD3-217ENST00000574022 GTSF1LQ9H1H1 148 aa1.37□□□□□ -2.19
CHD3-217ENST00000574022 MED28Q9H204 178 aa1.37□□□□□ -2.19
CHD3-217ENST00000574022 OR51I2Q9H344 312 aa1.37□□□□□ -2.19
CHD3-217ENST00000574022 TXNIPQ9H3M7 391 aa1.37□□□□□ -2.19
CHD3-217ENST00000574022 ZSCAN16Q9H4T2 348 aaPredicted RBP1.37□□□□□ -2.19
CHD3-217ENST00000574022 HES4Q9HCC6 221 aa1.37□□□□□ -2.19
CHD3-217ENST00000574022 FKBP14Q9NWM8 211 aa1.37□□□□□ -2.19
CHD3-217ENST00000574022 IL37Q9NZH6 218 aa1.37□□□□□ -2.19
CHD3-217ENST00000574022 MMACHCQ9Y4U1 282 aa1.37□□□□□ -2.19
CHD3-217ENST00000574022 SLC22A7Q9Y694 548 aa1.37□□□□□ -2.19
CHD3-217ENST00000574022 NPATQ14207 1427 aa1.37□□□□□ -2.19
CHD3-217ENST00000574022 NCOA1Q15788 1441 aa1.37□□□□□ -2.19
CHD3-217ENST00000574022 EIF3AQ14152 1382 aaKnown RBP1.36□□□□□ -2.19
CHD3-217ENST00000574022 KIF15Q9NS87 1388 aa1.36□□□□□ -2.19
CHD3-217ENST00000574022 THSD7AQ9UPZ6 1657 aa1.36□□□□□ -2.19
CHD3-217ENST00000574022 ABCA7Q8IZY2 2146 aa1.36□□□□□ -2.19
CHD3-217ENST00000574022 K7ERS5 55 aa1.36□□□□□ -2.19
CHD3-217ENST00000574022 MRASO14807 208 aa1.36□□□□□ -2.19
CHD3-217ENST00000574022 DENRO43583 198 aaKnown RBP1.36□□□□□ -2.19
CHD3-217ENST00000574022 OR7C2O60412 319 aa1.36□□□□□ -2.19
CHD3-217ENST00000574022 PLCH2O75038 1416 aa1.36□□□□□ -2.19
CHD3-217ENST00000574022 CDRT1O95170 752 aa1.36□□□□□ -2.19
CHD3-217ENST00000574022 NRASP01111 189 aa1.36□□□□□ -2.19
CHD3-217ENST00000574022 HRASP01112 189 aa1.36□□□□□ -2.19
CHD3-217ENST00000574022 KRASP01116 189 aa1.36□□□□□ -2.19
CHD3-217ENST00000574022 LTAP01374 205 aa1.36□□□□□ -2.19
CHD3-217ENST00000574022 OR5AC1P0C628 307 aa1.36□□□□□ -2.19
CHD3-217ENST00000574022 LINC00869P0C866 280 aa1.36□□□□□ -2.19
CHD3-217ENST00000574022 CD79AP11912 226 aa1.36□□□□□ -2.19
CHD3-217ENST00000574022 MARCKSL1P49006 195 aa1.36□□□□□ -2.19
CHD3-217ENST00000574022 ZNF133P52736 654 aaPredicted RBP1.36□□□□□ -2.19
CHD3-217ENST00000574022 RPS24P62847 133 aaKnown RBP1.36□□□□□ -2.19
CHD3-217ENST00000574022 EDDM3AQ14507 147 aa1.36□□□□□ -2.19
CHD3-217ENST00000574022 MMDQ15546 238 aa1.36□□□□□ -2.19
CHD3-217ENST00000574022 TMEM97Q5BJF2 176 aa1.36□□□□□ -2.19
CHD3-217ENST00000574022 ACSBG2Q5FVE4 666 aa1.36□□□□□ -2.19
CHD3-217ENST00000574022 CEP170Q5SW79 1584 aa1.36□□□□□ -2.19
CHD3-217ENST00000574022 FAM78BQ5VT40 261 aa1.36□□□□□ -2.19
CHD3-217ENST00000574022 HACD4Q5VWC8 232 aa1.36□□□□□ -2.19
CHD3-217ENST00000574022 LAIR2Q6ISS4 152 aa1.36□□□□□ -2.19
CHD3-217ENST00000574022 EBLN2Q6P2I7 272 aa1.36□□□□□ -2.19
CHD3-217ENST00000574022 PRSS54Q6PEW0 395 aa1.36□□□□□ -2.19
CHD3-217ENST00000574022 IGFL2Q6UWQ7 119 aa1.36□□□□□ -2.19
CHD3-217ENST00000574022 CYHR1Q6ZMK1 362 aa1.36□□□□□ -2.19
CHD3-217ENST00000574022 TIFABQ6ZNK6 161 aa1.36□□□□□ -2.19
CHD3-217ENST00000574022 Q6ZR03 302 aa1.36□□□□□ -2.19
CHD3-217ENST00000574022 HIST2H3AQ71DI3 136 aa1.36□□□□□ -2.19
CHD3-217ENST00000574022 NEGR1Q7Z3B1 354 aa1.36□□□□□ -2.19
CHD3-217ENST00000574022 ZNF101Q8IZC7 436 aa1.36□□□□□ -2.19
CHD3-217ENST00000574022 TMEM86BQ8N661 226 aa1.36□□□□□ -2.19
CHD3-217ENST00000574022 Q8N7P7 452 aa1.36□□□□□ -2.19
CHD3-217ENST00000574022 TMEM75Q8N9X5 138 aa1.36□□□□□ -2.19
CHD3-217ENST00000574022 OR1L8Q8NGR8 309 aa1.36□□□□□ -2.19
CHD3-217ENST00000574022 SLC35B4Q969S0 331 aa1.36□□□□□ -2.19
CHD3-217ENST00000574022 L3HYPDHQ96EM0 354 aa1.36□□□□□ -2.19
CHD3-217ENST00000574022 OR2V2Q96R30 315 aa1.36□□□□□ -2.19
CHD3-217ENST00000574022 OR52B2Q96RD2 323 aa1.36□□□□□ -2.19
CHD3-217ENST00000574022 PEBP4Q96S96 227 aa1.36□□□□□ -2.19
CHD3-217ENST00000574022 PHB2Q99623 299 aa1.36□□□□□ -2.19
CHD3-217ENST00000574022 RNF5Q99942 180 aa1.36□□□□□ -2.19
CHD3-217ENST00000574022 SHANK2-AS3Q9BTD1 123 aa1.36□□□□□ -2.19
CHD3-217ENST00000574022 MED18Q9BUE0 208 aa1.36□□□□□ -2.19
CHD3-217ENST00000574022 GNB1LQ9BYB4 327 aa1.36□□□□□ -2.19
CHD3-217ENST00000574022 KRTAP4-9Q9BYQ8 210 aa1.36□□□□□ -2.19
CHD3-217ENST00000574022 CENPHQ9H3R5 247 aa1.36□□□□□ -2.19
CHD3-217ENST00000574022 C11orf49Q9H6J7 331 aa1.36□□□□□ -2.19
CHD3-217ENST00000574022 ZNF430Q9H8G1 570 aaPredicted RBP1.36□□□□□ -2.19
CHD3-217ENST00000574022 DNAJC12Q9UKB3 198 aa1.36□□□□□ -2.19
CHD3-217ENST00000574022 FBXO5Q9UKT4 447 aa1.36□□□□□ -2.19
CHD3-217ENST00000574022 PCYT1BQ9Y5K3 369 aaPredicted RBP1.36□□□□□ -2.19
CHD3-217ENST00000574022 ARL5AQ9Y689 179 aa1.36□□□□□ -2.19
CHD3-217ENST00000574022 V9GYQ6 96 aa1.36□□□□□ -2.19
CHD3-217ENST00000574022 LOXHD1Q8IVV2 1947 aa1.36□□□□□ -2.19
CHD3-217ENST00000574022 PLXNB3Q9ULL4 1909 aa1.36□□□□□ -2.19
CHD3-217ENST00000574022 GRIN2BQ13224 1484 aa1.36□□□□□ -2.19
CHD3-217ENST00000574022 IGSF9BQ9UPX0 1349 aa1.36□□□□□ -2.19
CHD3-217ENST00000574022 ZNF646O15015 1829 aaPredicted RBP1.36□□□□□ -2.19
CHD3-217ENST00000574022 KIAA1671Q9BY89 1806 aa1.36□□□□□ -2.19
CHD3-217ENST00000574022 CCDC144AA2RUR9 1427 aa1.35□□□□□ -2.19
CHD3-217ENST00000574022 IZUMO1RA6ND01 250 aa1.35□□□□□ -2.19
CHD3-217ENST00000574022 OR5H14A6NHG9 310 aa1.35□□□□□ -2.19
CHD3-217ENST00000574022 DISC1C4P0D8 188 aa1.35□□□□□ -2.19
CHD3-217ENST00000574022 C4orf51C9J302 202 aa1.35□□□□□ -2.19
CHD3-217ENST00000574022 TMEM238C9JI98 176 aa1.35□□□□□ -2.19
CHD3-217ENST00000574022 H3BSA7 217 aa1.35□□□□□ -2.19
CHD3-217ENST00000574022 PSMD12O00232 456 aaPredicted RBP1.35□□□□□ -2.19
CHD3-217ENST00000574022 MED6O75586 246 aa1.35□□□□□ -2.19
CHD3-217ENST00000574022 DEDDO75618 318 aa1.35□□□□□ -2.19
CHD3-217ENST00000574022 STK16O75716 305 aa1.35□□□□□ -2.19
CHD3-217ENST00000574022 CCNKO75909 580 aa1.35□□□□□ -2.19
CHD3-217ENST00000574022 GYPCP04921 128 aa1.35□□□□□ -2.19
CHD3-217ENST00000574022 FABP1P07148 127 aa1.35□□□□□ -2.19
CHD3-217ENST00000574022 OR5G3P0C626 314 aa1.35□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms