RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 FGF16O43320 207 aa13.72□□□□□ -0.21
SMG6-212ENST00000573153 HBZP02008 142 aa13.72□□□□□ -0.21
SMG6-212ENST00000573153 GAPDHP04406 335 aaKnown RBP13.72□□□□□ -0.21
SMG6-212ENST00000573153 RCC1P18754 421 aaPredicted RBP13.72□□□□□ -0.21
SMG6-212ENST00000573153 MAP2K4P45985 399 aa13.72□□□□□ -0.21
SMG6-212ENST00000573153 ZNF134P52741 427 aa13.72□□□□□ -0.21
SMG6-212ENST00000573153 GABARAPL2P60520 117 aa13.72□□□□□ -0.21
SMG6-212ENST00000573153 LY6G6FQ5SQ64 297 aa13.72□□□□□ -0.21
SMG6-212ENST00000573153 OR10K2Q6IF99 312 aa13.72□□□□□ -0.21
SMG6-212ENST00000573153 OR2W3Q7Z3T1 314 aa13.72□□□□□ -0.21
SMG6-212ENST00000573153 IZUMO1Q8IYV9 350 aa13.72□□□□□ -0.21
SMG6-212ENST00000573153 C5orf56Q8N8D9 126 aa13.72□□□□□ -0.21
SMG6-212ENST00000573153 OR5AU1Q8NGC0 362 aa13.72□□□□□ -0.21
SMG6-212ENST00000573153 IGHV3-43A0A0B4J1X8 118 aa13.71□□□□□ -0.21
SMG6-212ENST00000573153 IGHV1-3A0A0C4DH29 117 aa13.71□□□□□ -0.21
SMG6-212ENST00000573153 UBE2QL1A1L167 161 aa13.71□□□□□ -0.21
SMG6-212ENST00000573153 IGHV3-43DP0DP04 118 aa13.71□□□□□ -0.21
SMG6-212ENST00000573153 IL3RAP26951 378 aa13.71□□□□□ -0.21
SMG6-212ENST00000573153 RANBP1P43487 201 aa13.71□□□□□ -0.21
SMG6-212ENST00000573153 HTD2P86397 168 aa13.71□□□□□ -0.21
SMG6-212ENST00000573153 FABP5Q01469 135 aa13.71□□□□□ -0.21
SMG6-212ENST00000573153 CD200R1LQ6Q8B3 271 aa13.71□□□□□ -0.21
SMG6-212ENST00000573153 FAM89BQ8N5H3 189 aa13.71□□□□□ -0.21
SMG6-212ENST00000573153 OR1L1Q8NH94 360 aa13.71□□□□□ -0.21
SMG6-212ENST00000573153 NEDD4LQ96PU5 975 aa13.71□□□□□ -0.21
SMG6-212ENST00000573153 SULT4A1Q9BR01 284 aa13.71□□□□□ -0.21
SMG6-212ENST00000573153 KCNK15Q9H427 330 aa13.71□□□□□ -0.21
SMG6-212ENST00000573153 TAF9BQ9HBM6 251 aa13.71□□□□□ -0.21
SMG6-212ENST00000573153 LRRC42Q9Y546 428 aa13.71□□□□□ -0.21
SMG6-212ENST00000573153 TXNL1O43396 289 aa13.7□□□□□ -0.22
SMG6-212ENST00000573153 PEX14O75381 377 aa13.7□□□□□ -0.22
SMG6-212ENST00000573153 NAPSAO96009 420 aa13.7□□□□□ -0.22
SMG6-212ENST00000573153 EMX1Q04741 257 aaPredicted RBP13.7□□□□□ -0.22
SMG6-212ENST00000573153 SSX1Q16384 188 aa13.7□□□□□ -0.22
SMG6-212ENST00000573153 ARSJQ5FYB0 599 aaPredicted RBP13.7□□□□□ -0.22
SMG6-212ENST00000573153 CT45A1Q5HYN5 189 aa13.7□□□□□ -0.22
SMG6-212ENST00000573153 ZNF880Q6PDB4 577 aa13.7□□□□□ -0.22
SMG6-212ENST00000573153 CT45A3Q8NHU0 189 aa13.7□□□□□ -0.22
SMG6-212ENST00000573153 RTN4IP1Q8WWV3 396 aaPredicted RBP13.7□□□□□ -0.22
SMG6-212ENST00000573153 NDUFB11Q9NX14 153 aa13.7□□□□□ -0.22
SMG6-212ENST00000573153 KCNIP1Q9NZI2 227 aa13.7□□□□□ -0.22
SMG6-212ENST00000573153 GNG12Q9UBI6 72 aa13.7□□□□□ -0.22
SMG6-212ENST00000573153 NOTCH3Q9UM47 2321 aa13.69□□□□□ -0.22
SMG6-212ENST00000573153 A0A0A6YYD4 124 aa13.69□□□□□ -0.22
SMG6-212ENST00000573153 TRBV6-6A0A0A6YYG2 114 aa13.69□□□□□ -0.22
SMG6-212ENST00000573153 FOXI3A8MTJ6 420 aaPredicted RBP13.69□□□□□ -0.22
SMG6-212ENST00000573153 DENRO43583 198 aaKnown RBP13.69□□□□□ -0.22
SMG6-212ENST00000573153 IGKV1D-33P01593 117 aa13.69□□□□□ -0.22
SMG6-212ENST00000573153 IGKV1-33P01594 117 aa13.69□□□□□ -0.22
SMG6-212ENST00000573153 ARSBP15848 533 aa13.69□□□□□ -0.22
SMG6-212ENST00000573153 TMEM11P17152 192 aa13.69□□□□□ -0.22
SMG6-212ENST00000573153 GALP22466 123 aa13.69□□□□□ -0.22
SMG6-212ENST00000573153 CALRP27797 417 aaKnown RBP13.69□□□□□ -0.22
SMG6-212ENST00000573153 CD1BP29016 333 aa13.69□□□□□ -0.22
SMG6-212ENST00000573153 REG1BP48304 166 aa13.69□□□□□ -0.22
SMG6-212ENST00000573153 PSMD7P51665 324 aa13.69□□□□□ -0.22
SMG6-212ENST00000573153 HMGN3Q15651 99 aa13.69□□□□□ -0.22
SMG6-212ENST00000573153 MORN2Q502X0 79 aa13.69□□□□□ -0.22
SMG6-212ENST00000573153 OXLD1Q5BKU9 147 aa13.69□□□□□ -0.22
SMG6-212ENST00000573153 WFDC9Q8NEX5 89 aa13.69□□□□□ -0.22
SMG6-212ENST00000573153 R3HDM4Q96D70 268 aa13.69□□□□□ -0.22
SMG6-212ENST00000573153 NICN1Q9BSH3 213 aa13.69□□□□□ -0.22
SMG6-212ENST00000573153 FAAP24Q9BTP7 215 aa13.69□□□□□ -0.22
SMG6-212ENST00000573153 LPAR5Q9H1C0 372 aa13.69□□□□□ -0.22
SMG6-212ENST00000573153 PLSCR3Q9NRY6 295 aa13.69□□□□□ -0.22
SMG6-212ENST00000573153 JPT1Q9UK76 154 aa13.69□□□□□ -0.22
SMG6-212ENST00000573153 HSF4Q9ULV5 492 aa13.69□□□□□ -0.22
SMG6-212ENST00000573153 IGHV3-72A0A0B4J1Y9 119 aa13.68□□□□□ -0.22
SMG6-212ENST00000573153 TRAV1-2A0A0B4J238 106 aa13.68□□□□□ -0.22
SMG6-212ENST00000573153 LINC01548A6NM66 108 aa13.68□□□□□ -0.22
SMG6-212ENST00000573153 ZNF736B4DX44 427 aaPredicted RBP13.68□□□□□ -0.22
SMG6-212ENST00000573153 LANCL1O43813 399 aa13.68□□□□□ -0.22
SMG6-212ENST00000573153 GNMTQ14749 295 aa13.68□□□□□ -0.22
SMG6-212ENST00000573153 RAB11BQ15907 218 aa13.68□□□□□ -0.22
SMG6-212ENST00000573153 NKAPLQ5M9Q1 402 aa13.68□□□□□ -0.22
SMG6-212ENST00000573153 MOB1BQ7L9L4 216 aa13.68□□□□□ -0.22
SMG6-212ENST00000573153 C6orf201Q7Z4U5 140 aa13.68□□□□□ -0.22
SMG6-212ENST00000573153 ODF3L1Q8IXM7 274 aa13.68□□□□□ -0.22
SMG6-212ENST00000573153 SVOPQ8N4V2 548 aa13.68□□□□□ -0.22
SMG6-212ENST00000573153 EAF1Q96JC9 268 aaPredicted RBP13.68□□□□□ -0.22
SMG6-212ENST00000573153 URM1Q9BTM9 101 aaKnown RBP13.68□□□□□ -0.22
SMG6-212ENST00000573153 YTHDF1Q9BYJ9 559 aaKnown RBP13.68□□□□□ -0.22
SMG6-212ENST00000573153 RIMS4Q9H426 269 aaPredicted RBP13.68□□□□□ -0.22
SMG6-212ENST00000573153 PLGRKTQ9HBL7 147 aa13.68□□□□□ -0.22
SMG6-212ENST00000573153 OR2S2Q9NQN1 319 aa13.68□□□□□ -0.22
SMG6-212ENST00000573153 AK6Q9Y3D8 172 aaKnown RBP13.68□□□□□ -0.22
SMG6-212ENST00000573153 LDLRAD4O15165 306 aa13.67□□□□□ -0.22
SMG6-212ENST00000573153 YPEL1O60688 119 aa13.67□□□□□ -0.22
SMG6-212ENST00000573153 IGHG2P01859 326 aa13.67□□□□□ -0.22
SMG6-212ENST00000573153 BLVRBP30043 206 aaPredicted RBP13.67□□□□□ -0.22
SMG6-212ENST00000573153 HES1Q14469 280 aa13.67□□□□□ -0.22
SMG6-212ENST00000573153 UBE2UQ5VVX9 321 aa13.67□□□□□ -0.22
SMG6-212ENST00000573153 ETV3LQ6ZN32 361 aa13.67□□□□□ -0.22
SMG6-212ENST00000573153 Q8N9W7 124 aa13.67□□□□□ -0.22
SMG6-212ENST00000573153 OR2T10Q8NGZ9 312 aa13.67□□□□□ -0.22
SMG6-212ENST00000573153 NOL4LQ96MY1 436 aaPredicted RBP13.67□□□□□ -0.22
SMG6-212ENST00000573153 YPEL2Q96QA6 119 aa13.67□□□□□ -0.22
SMG6-212ENST00000573153 Q9H521 79 aa13.67□□□□□ -0.22
SMG6-212ENST00000573153 V9GY05 133 aa13.67□□□□□ -0.22
SMG6-212ENST00000573153 TRDV1A0A1B0GX56 115 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms