RNA–Protein interactions for RNA: ENST00000572844.1

POLR2A-201, Transcript of RNA polymerase II subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLR2A, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-201ENST00000572844 FAM157AC9JC47 383 aa13.71□□□□□ -0.21
POLR2A-201ENST00000572844 CHST1O43916 411 aa13.71□□□□□ -0.21
POLR2A-201ENST00000572844 TMEM50AO95807 157 aa13.71□□□□□ -0.21
POLR2A-201ENST00000572844 TSPAN15O95858 294 aa13.71□□□□□ -0.21
POLR2A-201ENST00000572844 NBL1P41271 181 aa13.71□□□□□ -0.21
POLR2A-201ENST00000572844 PAX9P55771 341 aa13.71□□□□□ -0.21
POLR2A-201ENST00000572844 SMIM21Q3B7S5 101 aa13.71□□□□□ -0.21
POLR2A-201ENST00000572844 ZNF826PQ6ZT77 177 aa13.71□□□□□ -0.21
POLR2A-201ENST00000572844 ODF3L1Q8IXM7 274 aa13.71□□□□□ -0.21
POLR2A-201ENST00000572844 SNIP1Q8TAD8 396 aaKnown RBP13.71□□□□□ -0.21
POLR2A-201ENST00000572844 MAGT1Q9H0U3 335 aa13.71□□□□□ -0.21
POLR2A-201ENST00000572844 TMEM231Q9H6L2 316 aa13.71□□□□□ -0.21
POLR2A-201ENST00000572844 C19orf12Q9NSK7 152 aa13.71□□□□□ -0.21
POLR2A-201ENST00000572844 FAM96BQ9Y3D0 163 aa13.71□□□□□ -0.21
POLR2A-201ENST00000572844 DMXL1Q9Y485 3027 aa13.71□□□□□ -0.22
POLR2A-201ENST00000572844 RIF1Q5UIP0 2472 aaKnown RBP13.71□□□□□ -0.22
POLR2A-201ENST00000572844 A0A0G2JRQ6 117 aa13.7□□□□□ -0.22
POLR2A-201ENST00000572844 FAM74A7A6NL05 159 aa13.7□□□□□ -0.22
POLR2A-201ENST00000572844 UMAD1C9J7I0 102 aa13.7□□□□□ -0.22
POLR2A-201ENST00000572844 PTBP3O95758 552 aaKnown RBP13.7□□□□□ -0.22
POLR2A-201ENST00000572844 IGKV1-39P01597 117 aa13.7□□□□□ -0.22
POLR2A-201ENST00000572844 CRYABP02511 175 aaKnown RBP13.7□□□□□ -0.22
POLR2A-201ENST00000572844 IGKV1D-39P04432 117 aa13.7□□□□□ -0.22
POLR2A-201ENST00000572844 OR8U9P0C7N5 309 aa13.7□□□□□ -0.22
POLR2A-201ENST00000572844 SNCAP37840 140 aa13.7□□□□□ -0.22
POLR2A-201ENST00000572844 CAMLGP49069 296 aa13.7□□□□□ -0.22
POLR2A-201ENST00000572844 FABP6P51161 128 aa13.7□□□□□ -0.22
POLR2A-201ENST00000572844 FAM74A3Q4VXF1 159 aa13.7□□□□□ -0.22
POLR2A-201ENST00000572844 TIMM23BQ5SRD1 257 aa13.7□□□□□ -0.22
POLR2A-201ENST00000572844 HSD17B11Q8NBQ5 300 aa13.7□□□□□ -0.22
POLR2A-201ENST00000572844 OR8U1Q8NH10 309 aa13.7□□□□□ -0.22
POLR2A-201ENST00000572844 GALMQ96C23 342 aa13.7□□□□□ -0.22
POLR2A-201ENST00000572844 PPP1R3CQ9UQK1 317 aa13.7□□□□□ -0.22
POLR2A-201ENST00000572844 RBM7Q9Y580 266 aaKnown RBP13.7□□□□□ -0.22
POLR2A-201ENST00000572844 KIAA2026Q5HYC2 2103 aa13.7□□□□□ -0.22
POLR2A-201ENST00000572844 A6NLC8 198 aa13.7□□□□□ -0.22
POLR2A-201ENST00000572844 K7N7A8 449 aa13.7□□□□□ -0.22
POLR2A-201ENST00000572844 WNT9BO14905 357 aa13.7□□□□□ -0.22
POLR2A-201ENST00000572844 TIMP3P35625 211 aa13.7□□□□□ -0.22
POLR2A-201ENST00000572844 ZNF585BQ52M93 769 aa13.7□□□□□ -0.22
POLR2A-201ENST00000572844 C1orf185Q5T7R7 199 aa13.7□□□□□ -0.22
POLR2A-201ENST00000572844 PRAMEF6Q5VXH4 476 aa13.7□□□□□ -0.22
POLR2A-201ENST00000572844 PRR18Q8N4B5 295 aa13.7□□□□□ -0.22
POLR2A-201ENST00000572844 DRAM1Q8N682 238 aa13.7□□□□□ -0.22
POLR2A-201ENST00000572844 OR10Z1Q8NGY1 313 aa13.7□□□□□ -0.22
POLR2A-201ENST00000572844 LURAP1Q96LR2 239 aa13.7□□□□□ -0.22
POLR2A-201ENST00000572844 SH3BGRL3Q9H299 93 aa13.7□□□□□ -0.22
POLR2A-201ENST00000572844 CNOT1A5YKK6 2376 aaKnown RBP13.7□□□□□ -0.22
POLR2A-201ENST00000572844 A0A1B0GW64 132 aa13.69□□□□□ -0.22
POLR2A-201ENST00000572844 C12orf77C9JDV5 145 aa13.69□□□□□ -0.22
POLR2A-201ENST00000572844 H2AFB1P0C5Y9 115 aa13.69□□□□□ -0.22
POLR2A-201ENST00000572844 SFTA3P0C7M3 94 aa13.69□□□□□ -0.22
POLR2A-201ENST00000572844 ATF4P18848 351 aaPredicted RBP13.69□□□□□ -0.22
POLR2A-201ENST00000572844 CEBPDP49716 269 aaPredicted RBP13.69□□□□□ -0.22
POLR2A-201ENST00000572844 RPL23AP62750 156 aaKnown RBP13.69□□□□□ -0.22
POLR2A-201ENST00000572844 MIDNQ504T8 468 aa13.69□□□□□ -0.22
POLR2A-201ENST00000572844 DHRS7BQ6IAN0 325 aaPredicted RBP13.69□□□□□ -0.22
POLR2A-201ENST00000572844 FAM90A1Q86YD7 464 aa13.69□□□□□ -0.22
POLR2A-201ENST00000572844 ZNF645Q8N7E2 425 aa13.69□□□□□ -0.22
POLR2A-201ENST00000572844 CLRN3Q8NCR9 226 aa13.69□□□□□ -0.22
POLR2A-201ENST00000572844 LFNGQ8NES3 379 aa13.69□□□□□ -0.22
POLR2A-201ENST00000572844 GNPNAT1Q96EK6 184 aaPredicted RBP13.69□□□□□ -0.22
POLR2A-201ENST00000572844 SCRT1Q9BWW7 348 aa13.69□□□□□ -0.22
POLR2A-201ENST00000572844 KCNS2Q9ULS6 477 aa13.69□□□□□ -0.22
POLR2A-201ENST00000572844 WASF3Q9UPY6 502 aa13.69□□□□□ -0.22
POLR2A-201ENST00000572844 FAM215AQ9Y5M1 114 aa13.69□□□□□ -0.22
POLR2A-201ENST00000572844 WSB1Q9Y6I7 421 aa13.69□□□□□ -0.22
POLR2A-201ENST00000572844 IGHV3-64DA0A0J9YX35 117 aa13.68□□□□□ -0.22
POLR2A-201ENST00000572844 CFHR2P36980 270 aa13.68□□□□□ -0.22
POLR2A-201ENST00000572844 OR3A1P47881 315 aa13.68□□□□□ -0.22
POLR2A-201ENST00000572844 DYNLT3P51808 116 aa13.68□□□□□ -0.22
POLR2A-201ENST00000572844 PEA15Q15121 130 aa13.68□□□□□ -0.22
POLR2A-201ENST00000572844 TRAT1Q6PIZ9 186 aa13.68□□□□□ -0.22
POLR2A-201ENST00000572844 OR5C1Q8NGR4 320 aa13.68□□□□□ -0.22
POLR2A-201ENST00000572844 TMEM171Q8WVE6 324 aa13.68□□□□□ -0.22
POLR2A-201ENST00000572844 COQ2Q96H96 371 aa13.68□□□□□ -0.22
POLR2A-201ENST00000572844 MSL2Q9HCI7 577 aa13.68□□□□□ -0.22
POLR2A-201ENST00000572844 NUPL2O15504 423 aaKnown RBP13.68□□□□□ -0.22
POLR2A-201ENST00000572844 TXNL1O43396 289 aa13.68□□□□□ -0.22
POLR2A-201ENST00000572844 DFFBO76075 338 aa13.68□□□□□ -0.22
POLR2A-201ENST00000572844 IGKV1-5P01602 117 aa13.68□□□□□ -0.22
POLR2A-201ENST00000572844 ATP6V0CP27449 155 aa13.68□□□□□ -0.22
POLR2A-201ENST00000572844 IL2RGP31785 369 aa13.68□□□□□ -0.22
POLR2A-201ENST00000572844 CD80P33681 288 aa13.68□□□□□ -0.22
POLR2A-201ENST00000572844 ID4P47928 161 aa13.68□□□□□ -0.22
POLR2A-201ENST00000572844 EIF4EBP1Q13541 118 aaPredicted RBP13.68□□□□□ -0.22
POLR2A-201ENST00000572844 CLINT1Q14677 625 aa13.68□□□□□ -0.22
POLR2A-201ENST00000572844 TCTEX1D1Q8N7M0 179 aa13.68□□□□□ -0.22
POLR2A-201ENST00000572844 RBMXL3Q8N7X1 1067 aaKnown RBP13.68□□□□□ -0.22
POLR2A-201ENST00000572844 OR1L1Q8NH94 360 aa13.68□□□□□ -0.22
POLR2A-201ENST00000572844 RNASE11Q8TAA1 199 aaKnown RBP13.68□□□□□ -0.22
POLR2A-201ENST00000572844 PARP12Q9H0J9 701 aaKnown RBP13.68□□□□□ -0.22
POLR2A-201ENST00000572844 COA4Q9NYJ1 87 aa13.68□□□□□ -0.22
POLR2A-201ENST00000572844 KPTNQ9Y664 436 aa13.68□□□□□ -0.22
POLR2A-201ENST00000572844 ZFHX2Q9C0A1 2572 aaPredicted RBP13.68□□□□□ -0.22
POLR2A-201ENST00000572844 FAM90A26D6RGX4 464 aa13.67□□□□□ -0.22
POLR2A-201ENST00000572844 HBZP02008 142 aa13.67□□□□□ -0.22
POLR2A-201ENST00000572844 PRH1P02810 166 aa13.67□□□□□ -0.22
POLR2A-201ENST00000572844 EPHA1P21709 976 aa13.67□□□□□ -0.22
POLR2A-201ENST00000572844 SULT1A1P50225 295 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms