RNA–Protein interactions for RNA: ENST00000571558.5

RPAIN-209, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,423 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-209ENST00000571558 CD74P04233 296 aa11.24□□□□□ -0.61
RPAIN-209ENST00000571558 CD3DP04234 171 aa11.24□□□□□ -0.61
RPAIN-209ENST00000571558 CSF1P09603 554 aa11.24□□□□□ -0.61
RPAIN-209ENST00000571558 GNB2P62879 340 aa11.24□□□□□ -0.61
RPAIN-209ENST00000571558 HLA-DRB3P79483 266 aa11.24□□□□□ -0.61
RPAIN-209ENST00000571558 PAX2Q02962 417 aa11.24□□□□□ -0.61
RPAIN-209ENST00000571558 ESCO2Q56NI9 601 aa11.24□□□□□ -0.61
RPAIN-209ENST00000571558 HIST2H2BDQ6DRA6 164 aa11.24□□□□□ -0.61
RPAIN-209ENST00000571558 SETD6Q8TBK2 473 aa11.24□□□□□ -0.61
RPAIN-209ENST00000571558 MRGPRDQ8TDS7 321 aa11.24□□□□□ -0.61
RPAIN-209ENST00000571558 H1FXQ92522 213 aaKnown RBP11.24□□□□□ -0.61
RPAIN-209ENST00000571558 TAF9BQ9HBM6 251 aa11.24□□□□□ -0.61
RPAIN-209ENST00000571558 ZNF286AQ9HBT8 521 aa11.24□□□□□ -0.61
RPAIN-209ENST00000571558 PALMDQ9NP74 551 aa11.24□□□□□ -0.61
RPAIN-209ENST00000571558 ZNF69Q9UC07 566 aa11.24□□□□□ -0.61
RPAIN-209ENST00000571558 ANXA10Q9UJ72 324 aa11.24□□□□□ -0.61
RPAIN-209ENST00000571558 RPUSD1Q9UJJ7 312 aaKnown RBP11.24□□□□□ -0.61
RPAIN-209ENST00000571558 MGAT4AQ9UM21 535 aa11.24□□□□□ -0.61
RPAIN-209ENST00000571558 POLR3KQ9Y2Y1 108 aaPredicted RBP11.24□□□□□ -0.61
RPAIN-209ENST00000571558 UBE2J1Q9Y385 318 aaPredicted RBP11.24□□□□□ -0.61
RPAIN-209ENST00000571558 IGKV1-6A0A0C4DH72 117 aa11.23□□□□□ -0.61
RPAIN-209ENST00000571558 hADV38S2A0JD32 116 aa11.23□□□□□ -0.61
RPAIN-209ENST00000571558 M0QZ24 198 aa11.23□□□□□ -0.61
RPAIN-209ENST00000571558 PLA2G10O15496 165 aa11.23□□□□□ -0.61
RPAIN-209ENST00000571558 ECDO95905 644 aaPredicted RBP11.23□□□□□ -0.61
RPAIN-209ENST00000571558 SCTP09683 121 aa11.23□□□□□ -0.61
RPAIN-209ENST00000571558 GSTT2P0CG29 244 aa11.23□□□□□ -0.61
RPAIN-209ENST00000571558 GSTT2BP0CG30 244 aa11.23□□□□□ -0.61
RPAIN-209ENST00000571558 TBPP20226 339 aa11.23□□□□□ -0.61
RPAIN-209ENST00000571558 GZMHP20718 246 aa11.23□□□□□ -0.61
RPAIN-209ENST00000571558 HLA-DMAP28067 261 aa11.23□□□□□ -0.61
RPAIN-209ENST00000571558 SSTR5P35346 364 aa11.23□□□□□ -0.61
RPAIN-209ENST00000571558 GLP1RP43220 463 aa11.23□□□□□ -0.61
RPAIN-209ENST00000571558 DLX6P56179 175 aa11.23□□□□□ -0.61
RPAIN-209ENST00000571558 TAS2R19P59542 299 aa11.23□□□□□ -0.61
RPAIN-209ENST00000571558 LCN2P80188 198 aa11.23□□□□□ -0.61
RPAIN-209ENST00000571558 DCTN2Q13561 401 aaKnown RBP11.23□□□□□ -0.61
RPAIN-209ENST00000571558 DYRK1AQ13627 763 aa11.23□□□□□ -0.61
RPAIN-209ENST00000571558 ZNF273Q14593 569 aa11.23□□□□□ -0.61
RPAIN-209ENST00000571558 HERPUD1Q15011 391 aa11.23□□□□□ -0.61
RPAIN-209ENST00000571558 C17orf58Q2M2W7 97 aa11.23□□□□□ -0.61
RPAIN-209ENST00000571558 TRAT1Q6PIZ9 186 aa11.23□□□□□ -0.61
RPAIN-209ENST00000571558 TOMM5Q8N4H5 51 aa11.23□□□□□ -0.61
RPAIN-209ENST00000571558 ZNF565Q8N9K5 539 aa11.23□□□□□ -0.61
RPAIN-209ENST00000571558 OR5AP2Q8NGF4 316 aa11.23□□□□□ -0.61
RPAIN-209ENST00000571558 DUX5Q96PT3 197 aa11.23□□□□□ -0.61
RPAIN-209ENST00000571558 TBC1D24Q9ULP9 559 aa11.23□□□□□ -0.61
RPAIN-209ENST00000571558 AUP1Q9Y679 476 aa11.23□□□□□ -0.61
RPAIN-209ENST00000571558 NBEAL2Q6ZNJ1 2754 aa11.22□□□□□ -0.61
RPAIN-209ENST00000571558 DSCAML1Q8TD84 2053 aa11.22□□□□□ -0.61
RPAIN-209ENST00000571558 TRGV10A0A0A0MS01 117 aa11.22□□□□□ -0.61
RPAIN-209ENST00000571558 KIR2DS1A0A191URI9 304 aa11.22□□□□□ -0.61
RPAIN-209ENST00000571558 ZNF736B4DX44 427 aaPredicted RBP11.22□□□□□ -0.61
RPAIN-209ENST00000571558 NPIPB11E5RHQ5 1161 aa11.22□□□□□ -0.61
RPAIN-209ENST00000571558 FABP7O15540 132 aa11.22□□□□□ -0.61
RPAIN-209ENST00000571558 HBZP02008 142 aa11.22□□□□□ -0.61
RPAIN-209ENST00000571558 HRH1P35367 487 aa11.22□□□□□ -0.61
RPAIN-209ENST00000571558 KIR2DS4P43632 304 aa11.22□□□□□ -0.61
RPAIN-209ENST00000571558 AP3S2P59780 193 aa11.22□□□□□ -0.61
RPAIN-209ENST00000571558 KIR2DS1Q14954 304 aa11.22□□□□□ -0.61
RPAIN-209ENST00000571558 SLC9A3R2Q15599 337 aa11.22□□□□□ -0.61
RPAIN-209ENST00000571558 FBLN7Q53RD9 439 aa11.22□□□□□ -0.61
RPAIN-209ENST00000571558 IGSF11Q5DX21 431 aa11.22□□□□□ -0.61
RPAIN-209ENST00000571558 C6orf183Q5T699 404 aa11.22□□□□□ -0.61
RPAIN-209ENST00000571558 CD276Q5ZPR3 534 aa11.22□□□□□ -0.61
RPAIN-209ENST00000571558 STEAP1BQ6NZ63 245 aa11.22□□□□□ -0.61
RPAIN-209ENST00000571558 C16orf87Q6PH81 154 aa11.22□□□□□ -0.61
RPAIN-209ENST00000571558 OR4D10Q8NGI6 311 aa11.22□□□□□ -0.61
RPAIN-209ENST00000571558 OR4A4PQ8NGN8 299 aa11.22□□□□□ -0.61
RPAIN-209ENST00000571558 DEDD2Q8WXF8 326 aa11.22□□□□□ -0.61
RPAIN-209ENST00000571558 CABLES2Q9BTV7 478 aa11.22□□□□□ -0.61
RPAIN-209ENST00000571558 TAS2R3Q9NYW6 316 aa11.22□□□□□ -0.61
RPAIN-209ENST00000571558 CALYQ9NYX4 217 aa11.22□□□□□ -0.61
RPAIN-209ENST00000571558 KBTBD11-OT1A0A1B0GTJ5 212 aa11.21□□□□□ -0.61
RPAIN-209ENST00000571558 ZNF729A6NN14 1252 aaPredicted RBP11.21□□□□□ -0.61
RPAIN-209ENST00000571558 M0QYG6 137 aa11.21□□□□□ -0.61
RPAIN-209ENST00000571558 TIMM23O14925 209 aa11.21□□□□□ -0.61
RPAIN-209ENST00000571558 DIRAS3O95661 229 aa11.21□□□□□ -0.61
RPAIN-209ENST00000571558 AKAIN1P0CW23 69 aa11.21□□□□□ -0.61
RPAIN-209ENST00000571558 PPIAL4GP0DN37 164 aa11.21□□□□□ -0.61
RPAIN-209ENST00000571558 MDKP21741 143 aaPredicted RBP11.21□□□□□ -0.61
RPAIN-209ENST00000571558 TAS2R46P59540 309 aa11.21□□□□□ -0.61
RPAIN-209ENST00000571558 ASAH1Q13510 395 aa11.21□□□□□ -0.61
RPAIN-209ENST00000571558 VAX1Q5SQQ9 334 aa11.21□□□□□ -0.61
RPAIN-209ENST00000571558 ZNF57Q68EA5 555 aaPredicted RBP11.21□□□□□ -0.61
RPAIN-209ENST00000571558 C9orf139Q6ZV77 190 aa11.21□□□□□ -0.61
RPAIN-209ENST00000571558 OVCH2Q7RTZ1 564 aa11.21□□□□□ -0.61
RPAIN-209ENST00000571558 FAM185AQ8N0U4 392 aa11.21□□□□□ -0.61
RPAIN-209ENST00000571558 C11orf42Q8N5U0 333 aa11.21□□□□□ -0.61
RPAIN-209ENST00000571558 OR4C16Q8NGL9 310 aa11.21□□□□□ -0.61
RPAIN-209ENST00000571558 OR1L1Q8NH94 360 aa11.21□□□□□ -0.61
RPAIN-209ENST00000571558 UBALD1Q8TB05 177 aa11.21□□□□□ -0.61
RPAIN-209ENST00000571558 ARL11Q969Q4 196 aa11.21□□□□□ -0.61
RPAIN-209ENST00000571558 KIRREL1Q96J84 757 aa11.21□□□□□ -0.61
RPAIN-209ENST00000571558 TINAGL1Q9GZM7 467 aaPredicted RBP11.21□□□□□ -0.61
RPAIN-209ENST00000571558 BEX1Q9HBH7 125 aa11.21□□□□□ -0.61
RPAIN-209ENST00000571558 HRASLSQ9HDD0 168 aa11.21□□□□□ -0.61
RPAIN-209ENST00000571558 KCNIP1Q9NZI2 227 aa11.21□□□□□ -0.61
RPAIN-209ENST00000571558 F2RL2O00254 374 aa11.2□□□□□ -0.62
RPAIN-209ENST00000571558 PMP2P02689 132 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms