RNA–Protein interactions for RNA: ENST00000571252.2

PCDHGA4-201, Transcript of protocadherin gamma subfamily A, 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA4, Length 4,778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4-201ENST00000571252 TMEM187Q14656 261 aa9.64□□□□□ -0.87
PCDHGA4-201ENST00000571252 SLC35E3Q7Z769 313 aa9.64□□□□□ -0.87
PCDHGA4-201ENST00000571252 POM121Q96HA1 1249 aa9.64□□□□□ -0.87
PCDHGA4-201ENST00000571252 TUBD1Q9UJT1 453 aa9.64□□□□□ -0.87
PCDHGA4-201ENST00000571252 KIAA1671Q9BY89 1806 aa9.64□□□□□ -0.87
PCDHGA4-201ENST00000571252 M0R1B8 84 aa9.64□□□□□ -0.87
PCDHGA4-201ENST00000571252 FGF16O43320 207 aa9.64□□□□□ -0.87
PCDHGA4-201ENST00000571252 SSTP61278 116 aa9.64□□□□□ -0.87
PCDHGA4-201ENST00000571252 OR5A2Q8NGI9 324 aa9.64□□□□□ -0.87
PCDHGA4-201ENST00000571252 OR5B3Q8NH48 314 aa9.64□□□□□ -0.87
PCDHGA4-201ENST00000571252 M1APQ8TC57 530 aa9.64□□□□□ -0.87
PCDHGA4-201ENST00000571252 RTN4RQ9BZR6 473 aa9.64□□□□□ -0.87
PCDHGA4-201ENST00000571252 MANBALQ9NQG1 85 aa9.64□□□□□ -0.87
PCDHGA4-201ENST00000571252 IGHV3-43A0A0B4J1X8 118 aa9.64□□□□□ -0.87
PCDHGA4-201ENST00000571252 IGHV5-10-1A0A0J9YXX1 117 aa9.64□□□□□ -0.87
PCDHGA4-201ENST00000571252 SPINK4O60575 86 aa9.64□□□□□ -0.87
PCDHGA4-201ENST00000571252 PAGE4O60829 102 aa9.64□□□□□ -0.87
PCDHGA4-201ENST00000571252 CELA2AP08217 269 aa9.64□□□□□ -0.87
PCDHGA4-201ENST00000571252 IGHV3-43DP0DP04 118 aa9.64□□□□□ -0.87
PCDHGA4-201ENST00000571252 RANP62826 216 aaKnown RBP9.64□□□□□ -0.87
PCDHGA4-201ENST00000571252 SERF2P84101 59 aa9.64□□□□□ -0.87
PCDHGA4-201ENST00000571252 SSPNQ14714 243 aa9.64□□□□□ -0.87
PCDHGA4-201ENST00000571252 RNPS1Q15287 305 aaKnown RBP9.64□□□□□ -0.87
PCDHGA4-201ENST00000571252 ZNF766Q5HY98 468 aa9.64□□□□□ -0.87
PCDHGA4-201ENST00000571252 BIVMQ86UB2 503 aa9.64□□□□□ -0.87
PCDHGA4-201ENST00000571252 MRGPRDQ8TDS7 321 aa9.64□□□□□ -0.87
PCDHGA4-201ENST00000571252 FSCN3Q9NQT6 498 aa9.64□□□□□ -0.87
PCDHGA4-201ENST00000571252 RAMP1O60894 148 aa9.63□□□□□ -0.87
PCDHGA4-201ENST00000571252 DEFA4P12838 97 aa9.63□□□□□ -0.87
PCDHGA4-201ENST00000571252 MST1P26927 711 aa9.63□□□□□ -0.87
PCDHGA4-201ENST00000571252 CDX1P47902 265 aaPredicted RBP9.63□□□□□ -0.87
PCDHGA4-201ENST00000571252 TUSC5Q8IXB3 177 aa9.63□□□□□ -0.87
PCDHGA4-201ENST00000571252 PAQR4Q8N4S7 273 aaPredicted RBP9.63□□□□□ -0.87
PCDHGA4-201ENST00000571252 OR4A4PQ8NGN8 299 aa9.63□□□□□ -0.87
PCDHGA4-201ENST00000571252 DTD1Q8TEA8 209 aa9.63□□□□□ -0.87
PCDHGA4-201ENST00000571252 NAT8BQ9UHF3 227 aa9.63□□□□□ -0.87
PCDHGA4-201ENST00000571252 IGKV3D-11A0A0A0MRZ8 115 aa9.63□□□□□ -0.87
PCDHGA4-201ENST00000571252 F8VVB4 439 aa9.63□□□□□ -0.87
PCDHGA4-201ENST00000571252 F8VWA3 439 aa9.63□□□□□ -0.87
PCDHGA4-201ENST00000571252 H0Y8G0 127 aa9.63□□□□□ -0.87
PCDHGA4-201ENST00000571252 HSBP1O75506 76 aa9.63□□□□□ -0.87
PCDHGA4-201ENST00000571252 CYB5R3P00387 301 aaPredicted RBP9.63□□□□□ -0.87
PCDHGA4-201ENST00000571252 RSPO4Q2I0M5 234 aaPredicted RBP9.63□□□□□ -0.87
PCDHGA4-201ENST00000571252 DPPA3Q6W0C5 159 aa9.63□□□□□ -0.87
PCDHGA4-201ENST00000571252 ZNF488Q96MN9 340 aa9.63□□□□□ -0.87
PCDHGA4-201ENST00000571252 COMMD5Q9GZQ3 224 aa9.63□□□□□ -0.87
PCDHGA4-201ENST00000571252 FCN1O00602 326 aa9.63□□□□□ -0.87
PCDHGA4-201ENST00000571252 OR5G3P0C626 314 aa9.63□□□□□ -0.87
PCDHGA4-201ENST00000571252 OR10J4P0C629 311 aa9.63□□□□□ -0.87
PCDHGA4-201ENST00000571252 PMCHP20382 165 aa9.63□□□□□ -0.87
PCDHGA4-201ENST00000571252 SUCLG1P53597 346 aaKnown RBP9.63□□□□□ -0.87
PCDHGA4-201ENST00000571252 CD81P60033 236 aa9.63□□□□□ -0.87
PCDHGA4-201ENST00000571252 HABP2Q14520 560 aaPredicted RBP9.63□□□□□ -0.87
PCDHGA4-201ENST00000571252 KHDC1LQ5JSQ8 128 aa9.63□□□□□ -0.87
PCDHGA4-201ENST00000571252 FNDC7Q5VTL7 733 aa9.63□□□□□ -0.87
PCDHGA4-201ENST00000571252 SPINK14Q6IE38 97 aa9.63□□□□□ -0.87
PCDHGA4-201ENST00000571252 ANAPC16Q96DE5 110 aa9.63□□□□□ -0.87
PCDHGA4-201ENST00000571252 LYRM2Q9NU23 88 aaPredicted RBP9.63□□□□□ -0.87
PCDHGA4-201ENST00000571252 LTBP2Q14767 1821 aa9.63□□□□□ -0.87
PCDHGA4-201ENST00000571252 ALPK3Q96L96 1907 aa9.63□□□□□ -0.87
PCDHGA4-201ENST00000571252 CTXND1A0A1B0GTU2 59 aa9.63□□□□□ -0.87
PCDHGA4-201ENST00000571252 CDIPTO14735 213 aa9.63□□□□□ -0.87
PCDHGA4-201ENST00000571252 CCKARP32238 428 aa9.63□□□□□ -0.87
PCDHGA4-201ENST00000571252 PMELP40967 661 aa9.63□□□□□ -0.87
PCDHGA4-201ENST00000571252 TMPRSS7Q7RTY8 843 aa9.63□□□□□ -0.87
PCDHGA4-201ENST00000571252 TGIF2-C20orf24A0A0A6YYL0 155 aa9.62□□□□□ -0.87
PCDHGA4-201ENST00000571252 PRR19A6NJB7 356 aa9.62□□□□□ -0.87
PCDHGA4-201ENST00000571252 J3QT63 122 aa9.62□□□□□ -0.87
PCDHGA4-201ENST00000571252 GALR2O43603 387 aaPredicted RBP9.62□□□□□ -0.87
PCDHGA4-201ENST00000571252 CT45A6P0DMU7 189 aa9.62□□□□□ -0.87
PCDHGA4-201ENST00000571252 CT45A5P0DMU8 189 aa9.62□□□□□ -0.87
PCDHGA4-201ENST00000571252 CT45A7P0DMV0 189 aa9.62□□□□□ -0.87
PCDHGA4-201ENST00000571252 NAT2P11245 290 aa9.62□□□□□ -0.87
PCDHGA4-201ENST00000571252 IGFBP7Q16270 282 aa9.62□□□□□ -0.87
PCDHGA4-201ENST00000571252 CT45A1Q5HYN5 189 aa9.62□□□□□ -0.87
PCDHGA4-201ENST00000571252 KDF1Q8NAX2 398 aaPredicted RBP9.62□□□□□ -0.87
PCDHGA4-201ENST00000571252 CT45A3Q8NHU0 189 aa9.62□□□□□ -0.87
PCDHGA4-201ENST00000571252 BSCL2Q96G97 398 aaPredicted RBP9.62□□□□□ -0.87
PCDHGA4-201ENST00000571252 AURKAIP1Q9NWT8 199 aaPredicted RBP9.62□□□□□ -0.87
PCDHGA4-201ENST00000571252 AUP1Q9Y679 476 aa9.62□□□□□ -0.87
PCDHGA4-201ENST00000571252 WDR87Q6ZQQ6 2873 aa9.62□□□□□ -0.87
PCDHGA4-201ENST00000571252 KIAA1324LA8MWY0 1029 aaPredicted RBP9.62□□□□□ -0.87
PCDHGA4-201ENST00000571252 NPIPB7O75200 414 aa9.62□□□□□ -0.87
PCDHGA4-201ENST00000571252 PRR27Q6MZM9 219 aa9.62□□□□□ -0.87
PCDHGA4-201ENST00000571252 CMTM2Q8TAZ6 248 aa9.62□□□□□ -0.87
PCDHGA4-201ENST00000571252 HIF1ANQ9NWT6 349 aa9.62□□□□□ -0.87
PCDHGA4-201ENST00000571252 HEATR5AQ86XA9 2040 aa9.62□□□□□ -0.87
PCDHGA4-201ENST00000571252 LOC390937A0A1W2PQ73 354 aa9.62□□□□□ -0.87
PCDHGA4-201ENST00000571252 M0R143 59 aa9.62□□□□□ -0.87
PCDHGA4-201ENST00000571252 FBP1P09467 338 aa9.62□□□□□ -0.87
PCDHGA4-201ENST00000571252 FGF12P61328 243 aa9.62□□□□□ -0.87
PCDHGA4-201ENST00000571252 ZNF343Q6P1L6 599 aa9.62□□□□□ -0.87
PCDHGA4-201ENST00000571252 ABHD14BQ96IU4 210 aa9.62□□□□□ -0.87
PCDHGA4-201ENST00000571252 GSN-AS1Q9NRJ2 163 aa9.62□□□□□ -0.87
PCDHGA4-201ENST00000571252 LINC00587B1AMM8 73 aa9.62□□□□□ -0.87
PCDHGA4-201ENST00000571252 H0Y980 276 aa9.62□□□□□ -0.87
PCDHGA4-201ENST00000571252 PGA5P0DJD9 388 aa9.62□□□□□ -0.87
PCDHGA4-201ENST00000571252 SUB1P53999 127 aaKnown RBP eCLIP9.62□□□□□ -0.87
PCDHGA4-201ENST00000571252 BTNL3Q6UXE8 466 aa9.62□□□□□ -0.87
PCDHGA4-201ENST00000571252 KLHDC1Q8N7A1 406 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms