RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 CGB3P0DN86 165 aa10.79□□□□□ -0.68
CCDC40-205ENST00000571028 CGB7P0DN87 165 aa10.79□□□□□ -0.68
CCDC40-205ENST00000571028 TALDO1P37837 337 aa10.79□□□□□ -0.68
CCDC40-205ENST00000571028 GNG10P50151 68 aa10.79□□□□□ -0.68
CCDC40-205ENST00000571028 UBE2E1P51965 193 aa10.79□□□□□ -0.68
CCDC40-205ENST00000571028 LGALS4P56470 323 aa10.79□□□□□ -0.68
CCDC40-205ENST00000571028 SCAND1P57086 179 aa10.79□□□□□ -0.68
CCDC40-205ENST00000571028 PROK1P58294 105 aa10.79□□□□□ -0.68
CCDC40-205ENST00000571028 UBE2NLQ5JXB2 153 aa10.79□□□□□ -0.68
CCDC40-205ENST00000571028 VAX1Q5SQQ9 334 aa10.79□□□□□ -0.68
CCDC40-205ENST00000571028 HEPN1Q6WQI6 88 aa10.79□□□□□ -0.68
CCDC40-205ENST00000571028 ABHD12Q8N2K0 398 aa10.79□□□□□ -0.68
CCDC40-205ENST00000571028 PIP4P2Q8N4L2 257 aa10.79□□□□□ -0.68
CCDC40-205ENST00000571028 MAFIPQ8WZ33 124 aa10.79□□□□□ -0.68
CCDC40-205ENST00000571028 AP3S1Q92572 193 aa10.79□□□□□ -0.68
CCDC40-205ENST00000571028 KCTD12Q96CX2 325 aaKnown RBP10.79□□□□□ -0.68
CCDC40-205ENST00000571028 KIRREL1Q96J84 757 aa10.79□□□□□ -0.68
CCDC40-205ENST00000571028 BCL7BQ9BQE9 202 aa10.79□□□□□ -0.68
CCDC40-205ENST00000571028 TMEM133Q9H2Q1 129 aa10.79□□□□□ -0.68
CCDC40-205ENST00000571028 TAF9BQ9HBM6 251 aa10.79□□□□□ -0.68
CCDC40-205ENST00000571028 C12orf4Q9NQ89 552 aa10.79□□□□□ -0.68
CCDC40-205ENST00000571028 RSL24D1Q9UHA3 163 aaKnown RBP10.79□□□□□ -0.68
CCDC40-205ENST00000571028 FAM96BQ9Y3D0 163 aa10.79□□□□□ -0.68
CCDC40-205ENST00000571028 IGHV2-26A0A0B4J1V2 119 aa10.78□□□□□ -0.68
CCDC40-205ENST00000571028 A0A1W2PPE3 182 aa10.78□□□□□ -0.68
CCDC40-205ENST00000571028 TMEM235A6NFC5 223 aa10.78□□□□□ -0.68
CCDC40-205ENST00000571028 C15orf65H3BRN8 121 aa10.78□□□□□ -0.68
CCDC40-205ENST00000571028 RGS5O15539 181 aa10.78□□□□□ -0.68
CCDC40-205ENST00000571028 GPR137BO60478 399 aa10.78□□□□□ -0.68
CCDC40-205ENST00000571028 TMEM127O75204 238 aa10.78□□□□□ -0.68
CCDC40-205ENST00000571028 RBP4P02753 201 aa10.78□□□□□ -0.68
CCDC40-205ENST00000571028 EIF4EP06730 217 aaKnown RBP10.78□□□□□ -0.68
CCDC40-205ENST00000571028 FCER2P06734 321 aa10.78□□□□□ -0.68
CCDC40-205ENST00000571028 PTHLHP12272 177 aa10.78□□□□□ -0.68
CCDC40-205ENST00000571028 PAX6P26367 422 aa10.78□□□□□ -0.68
CCDC40-205ENST00000571028 SAA4P35542 130 aa10.78□□□□□ -0.68
CCDC40-205ENST00000571028 LOXL3P58215 753 aa10.78□□□□□ -0.68
CCDC40-205ENST00000571028 GNG2P59768 71 aa10.78□□□□□ -0.68
CCDC40-205ENST00000571028 PAX5Q02548 391 aa10.78□□□□□ -0.68
CCDC40-205ENST00000571028 OR52W1Q6IF63 320 aa10.78□□□□□ -0.68
CCDC40-205ENST00000571028 OR10V1Q8NGI7 309 aa10.78□□□□□ -0.68
CCDC40-205ENST00000571028 NUDCD2Q8WVJ2 157 aa10.78□□□□□ -0.68
CCDC40-205ENST00000571028 C17orf50Q8WW18 174 aa10.78□□□□□ -0.68
CCDC40-205ENST00000571028 IL1F10Q8WWZ1 152 aa10.78□□□□□ -0.68
CCDC40-205ENST00000571028 ACOT12Q8WYK0 555 aa10.78□□□□□ -0.68
CCDC40-205ENST00000571028 S100A16Q96FQ6 103 aaKnown RBP10.78□□□□□ -0.68
CCDC40-205ENST00000571028 DCUN1D5Q9BTE7 237 aa10.78□□□□□ -0.68
CCDC40-205ENST00000571028 CLEC7AQ9BXN2 247 aa10.78□□□□□ -0.68
CCDC40-205ENST00000571028 ZNF286AQ9HBT8 521 aa10.78□□□□□ -0.68
CCDC40-205ENST00000571028 ZNRD1Q9P1U0 126 aa10.78□□□□□ -0.68
CCDC40-205ENST00000571028 GNG12Q9UBI6 72 aa10.78□□□□□ -0.68
CCDC40-205ENST00000571028 ZNF230Q9UIE0 474 aaPredicted RBP10.78□□□□□ -0.68
CCDC40-205ENST00000571028 MRPS7Q9Y2R9 242 aaKnown RBP10.78□□□□□ -0.68
CCDC40-205ENST00000571028 DPPA5A6NC42 116 aa10.77□□□□□ -0.69
CCDC40-205ENST00000571028 SERPINE3A8MV23 424 aa10.77□□□□□ -0.69
CCDC40-205ENST00000571028 TOR1AO14656 332 aa10.77□□□□□ -0.69
CCDC40-205ENST00000571028 ORC5O43913 435 aa10.77□□□□□ -0.69
CCDC40-205ENST00000571028 SCGNO76038 276 aa10.77□□□□□ -0.69
CCDC40-205ENST00000571028 NAPSAO96009 420 aa10.77□□□□□ -0.69
CCDC40-205ENST00000571028 ZNF260Q3ZCT1 412 aa10.77□□□□□ -0.69
CCDC40-205ENST00000571028 PLA1AQ53H76 456 aa10.77□□□□□ -0.69
CCDC40-205ENST00000571028 KIAA2026Q5HYC2 2103 aa10.77□□□□□ -0.69
CCDC40-205ENST00000571028 KPRPQ5T749 579 aaPredicted RBP10.77□□□□□ -0.69
CCDC40-205ENST00000571028 TRAT1Q6PIZ9 186 aa10.77□□□□□ -0.69
CCDC40-205ENST00000571028 LHFPL4Q7Z7J7 247 aa10.77□□□□□ -0.69
CCDC40-205ENST00000571028 GAPTQ8N292 157 aa10.77□□□□□ -0.69
CCDC40-205ENST00000571028 OR52L2PQ8NGH6 319 aa10.77□□□□□ -0.69
CCDC40-205ENST00000571028 DYNC2LI1Q8TCX1 351 aa10.77□□□□□ -0.69
CCDC40-205ENST00000571028 ST6GALNAC5Q9BVH7 336 aa10.77□□□□□ -0.69
CCDC40-205ENST00000571028 RBM38Q9H0Z9 239 aaKnown RBP10.77□□□□□ -0.69
CCDC40-205ENST00000571028 ABCG5Q9H222 651 aa10.77□□□□□ -0.69
CCDC40-205ENST00000571028 RIMS4Q9H426 269 aaPredicted RBP10.77□□□□□ -0.69
CCDC40-205ENST00000571028 Q9N2K0 584 aa10.77□□□□□ -0.69
CCDC40-205ENST00000571028 SMIM31A0A1B0GVY4 71 aa10.76□□□□□ -0.69
CCDC40-205ENST00000571028 NPIPB11E5RHQ5 1161 aa10.76□□□□□ -0.69
CCDC40-205ENST00000571028 CTDSP2O14595 271 aa10.76□□□□□ -0.69
CCDC40-205ENST00000571028 OPN1MWP04001 364 aa10.76□□□□□ -0.69
CCDC40-205ENST00000571028 FCGR3AP08637 254 aa10.76□□□□□ -0.69
CCDC40-205ENST00000571028 SCTP09683 121 aa10.76□□□□□ -0.69
CCDC40-205ENST00000571028 OPN1MW2P0DN77 364 aa10.76□□□□□ -0.69
CCDC40-205ENST00000571028 OPN1MW3P0DN78 364 aa10.76□□□□□ -0.69
CCDC40-205ENST00000571028 ELK1P19419 428 aa10.76□□□□□ -0.69
CCDC40-205ENST00000571028 MNDAP41218 407 aa10.76□□□□□ -0.69
CCDC40-205ENST00000571028 PRRX1P54821 245 aa10.76□□□□□ -0.69
CCDC40-205ENST00000571028 GNMTQ14749 295 aa10.76□□□□□ -0.69
CCDC40-205ENST00000571028 ARL6IP1Q15041 203 aa10.76□□□□□ -0.69
CCDC40-205ENST00000571028 TMEM69Q5SWH9 247 aa10.76□□□□□ -0.69
CCDC40-205ENST00000571028 SAMD5Q5TGI4 173 aa10.76□□□□□ -0.69
CCDC40-205ENST00000571028 GALMQ96C23 342 aa10.76□□□□□ -0.69
CCDC40-205ENST00000571028 C6orf62Q9GZU0 229 aaPredicted RBP10.76□□□□□ -0.69
CCDC40-205ENST00000571028 RAB9BQ9NP90 201 aa10.76□□□□□ -0.69
CCDC40-205ENST00000571028 OR2S2Q9NQN1 319 aa10.76□□□□□ -0.69
CCDC40-205ENST00000571028 MBNL3Q9NUK0 354 aaKnown RBP10.76□□□□□ -0.69
CCDC40-205ENST00000571028 MEIS3P1A6NDR6 274 aa10.75□□□□□ -0.69
CCDC40-205ENST00000571028 GSTP1P09211 210 aaKnown RBP10.75□□□□□ -0.69
CCDC40-205ENST00000571028 PPP1CCP36873 323 aaKnown RBP10.75□□□□□ -0.69
CCDC40-205ENST00000571028 TAS2R20P59543 309 aa10.75□□□□□ -0.69
CCDC40-205ENST00000571028 HLA-DRB3P79483 266 aa10.75□□□□□ -0.69
CCDC40-205ENST00000571028 HMGN3Q15651 99 aa10.75□□□□□ -0.69
CCDC40-205ENST00000571028 RNASE12Q5GAN4 147 aaKnown RBP10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms