RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 GLCCI1Q86VQ1 547 aa12.68□□□□□ -0.38
HERPUD1-219ENST00000570273 H1FOOQ8IZA3 346 aaPredicted RBP12.68□□□□□ -0.38
HERPUD1-219ENST00000570273 REG4Q9BYZ8 158 aa12.68□□□□□ -0.38
HERPUD1-219ENST00000570273 JPT1Q9UK76 154 aa12.68□□□□□ -0.38
HERPUD1-219ENST00000570273 FAM172BPA6NC97 362 aa12.67□□□□□ -0.38
HERPUD1-219ENST00000570273 MMP23AO75900 390 aa12.67□□□□□ -0.38
HERPUD1-219ENST00000570273 SPNP16150 400 aa12.67□□□□□ -0.38
HERPUD1-219ENST00000570273 SLC6A1P30531 599 aa12.67□□□□□ -0.38
HERPUD1-219ENST00000570273 CEACAM6P40199 344 aa12.67□□□□□ -0.38
HERPUD1-219ENST00000570273 FXYD4P59646 89 aa12.67□□□□□ -0.38
HERPUD1-219ENST00000570273 LOXL1Q08397 574 aaPredicted RBP12.67□□□□□ -0.38
HERPUD1-219ENST00000570273 TRIM16LQ309B1 348 aa12.67□□□□□ -0.38
HERPUD1-219ENST00000570273 FAM53AQ6NSI3 398 aaPredicted RBP12.67□□□□□ -0.38
HERPUD1-219ENST00000570273 HEPN1Q6WQI6 88 aa12.67□□□□□ -0.38
HERPUD1-219ENST00000570273 OR10A7Q8NGE5 316 aa12.67□□□□□ -0.38
HERPUD1-219ENST00000570273 GIMAP1Q8WWP7 306 aa12.67□□□□□ -0.38
HERPUD1-219ENST00000570273 FXYD6Q9H0Q3 95 aa12.67□□□□□ -0.38
HERPUD1-219ENST00000570273 OCEL1Q9H607 264 aa12.67□□□□□ -0.38
HERPUD1-219ENST00000570273 GFOD1Q9NXC2 390 aa12.67□□□□□ -0.38
HERPUD1-219ENST00000570273 RDH8Q9NYR8 311 aa12.67□□□□□ -0.38
HERPUD1-219ENST00000570273 hCG_1809904A0A1W2PP81 198 aa12.66□□□□□ -0.38
HERPUD1-219ENST00000570273 A0A1W2PPE2 198 aa12.66□□□□□ -0.38
HERPUD1-219ENST00000570273 A0A1W2PR64 198 aa12.66□□□□□ -0.38
HERPUD1-219ENST00000570273 A0A1W2PRV1 198 aa12.66□□□□□ -0.38
HERPUD1-219ENST00000570273 C17orf98A8MV24 154 aa12.66□□□□□ -0.38
HERPUD1-219ENST00000570273 TUSC2O75896 110 aa12.66□□□□□ -0.38
HERPUD1-219ENST00000570273 RGS11O94810 467 aa12.66□□□□□ -0.38
HERPUD1-219ENST00000570273 PPYP01298 95 aa12.66□□□□□ -0.38
HERPUD1-219ENST00000570273 PGAM2P15259 253 aa12.66□□□□□ -0.38
HERPUD1-219ENST00000570273 LOXL3P58215 753 aa12.66□□□□□ -0.38
HERPUD1-219ENST00000570273 RBMS2Q15434 407 aaKnown RBP12.66□□□□□ -0.38
HERPUD1-219ENST00000570273 PLA1AQ53H76 456 aa12.66□□□□□ -0.38
HERPUD1-219ENST00000570273 ZNF660Q6AZW8 331 aaPredicted RBP12.66□□□□□ -0.38
HERPUD1-219ENST00000570273 DHRS11Q6UWP2 260 aa12.66□□□□□ -0.38
HERPUD1-219ENST00000570273 BTNL3Q6UXE8 466 aa12.66□□□□□ -0.38
HERPUD1-219ENST00000570273 LHFPL1Q86WI0 220 aa12.66□□□□□ -0.38
HERPUD1-219ENST00000570273 KIR3DL3Q8N743 410 aa12.66□□□□□ -0.38
HERPUD1-219ENST00000570273 WFDC11Q8NEX6 87 aa12.66□□□□□ -0.38
HERPUD1-219ENST00000570273 OR52M1Q8NGK5 317 aa12.66□□□□□ -0.38
HERPUD1-219ENST00000570273 OR13C8Q8NGS7 320 aa12.66□□□□□ -0.38
HERPUD1-219ENST00000570273 TERB2Q8NHR7 220 aa12.66□□□□□ -0.38
HERPUD1-219ENST00000570273 TOMM40LQ969M1 308 aa12.66□□□□□ -0.38
HERPUD1-219ENST00000570273 SUCNR1Q9BXA5 334 aa12.66□□□□□ -0.38
HERPUD1-219ENST00000570273 PARP12Q9H0J9 701 aaKnown RBP12.66□□□□□ -0.38
HERPUD1-219ENST00000570273 POLR3KQ9Y2Y1 108 aaPredicted RBP12.66□□□□□ -0.38
HERPUD1-219ENST00000570273 SESN1Q9Y6P5 492 aa12.66□□□□□ -0.38
HERPUD1-219ENST00000570273 KIAA2026Q5HYC2 2103 aa12.65□□□□□ -0.38
HERPUD1-219ENST00000570273 OR5H14A6NHG9 310 aa12.65□□□□□ -0.38
HERPUD1-219ENST00000570273 M0R1W7 72 aa12.65□□□□□ -0.38
HERPUD1-219ENST00000570273 NDUFB6O95139 128 aa12.65□□□□□ -0.38
HERPUD1-219ENST00000570273 RBP4P02753 201 aa12.65□□□□□ -0.38
HERPUD1-219ENST00000570273 IGHV1-8P0DP01 117 aa12.65□□□□□ -0.38
HERPUD1-219ENST00000570273 ERVFRD-1P60508 538 aa12.65□□□□□ -0.38
HERPUD1-219ENST00000570273 ARF6P62330 175 aa12.65□□□□□ -0.38
HERPUD1-219ENST00000570273 PAX2Q02962 417 aa12.65□□□□□ -0.38
HERPUD1-219ENST00000570273 OXA1LQ15070 435 aa12.65□□□□□ -0.38
HERPUD1-219ENST00000570273 MAPK1IP1LQ8NDC0 245 aa12.65□□□□□ -0.38
HERPUD1-219ENST00000570273 CHPT1Q8WUD6 406 aa12.65□□□□□ -0.38
HERPUD1-219ENST00000570273 DACT3Q96B18 629 aaPredicted RBP12.65□□□□□ -0.38
HERPUD1-219ENST00000570273 MOB3AQ96BX8 217 aa12.65□□□□□ -0.38
HERPUD1-219ENST00000570273 MMP26Q9NRE1 261 aa12.65□□□□□ -0.38
HERPUD1-219ENST00000570273 COPZ2Q9P299 210 aa12.65□□□□□ -0.38
HERPUD1-219ENST00000570273 OR2W1Q9Y3N9 320 aa12.65□□□□□ -0.38
HERPUD1-219ENST00000570273 DSCAML1Q8TD84 2053 aa12.65□□□□□ -0.38
HERPUD1-219ENST00000570273 B4DSR2 109 aa12.64□□□□□ -0.39
HERPUD1-219ENST00000570273 YPEL1O60688 119 aa12.64□□□□□ -0.39
HERPUD1-219ENST00000570273 IGHV3-7P01780 117 aa12.64□□□□□ -0.39
HERPUD1-219ENST00000570273 TCRBP04435 133 aa12.64□□□□□ -0.39
HERPUD1-219ENST00000570273 MSMBP08118 114 aa12.64□□□□□ -0.39
HERPUD1-219ENST00000570273 LUMP51884 338 aaPredicted RBP12.64□□□□□ -0.39
HERPUD1-219ENST00000570273 DVL1P1P54792 670 aaPredicted RBP12.64□□□□□ -0.39
HERPUD1-219ENST00000570273 AADACL3Q5VUY0 350 aa12.64□□□□□ -0.39
HERPUD1-219ENST00000570273 PLET1Q6UQ28 207 aa12.64□□□□□ -0.39
HERPUD1-219ENST00000570273 CENPSQ8N2Z9 138 aa12.64□□□□□ -0.39
HERPUD1-219ENST00000570273 MINDY2Q8NBR6 621 aa12.64□□□□□ -0.39
HERPUD1-219ENST00000570273 MARCH1Q8TCQ1 289 aa12.64□□□□□ -0.39
HERPUD1-219ENST00000570273 LEAP2Q969E1 77 aa12.64□□□□□ -0.39
HERPUD1-219ENST00000570273 C1orf159Q96HA4 380 aa12.64□□□□□ -0.39
HERPUD1-219ENST00000570273 DMRTB1Q96MA1 342 aa12.64□□□□□ -0.39
HERPUD1-219ENST00000570273 YPEL2Q96QA6 119 aa12.64□□□□□ -0.39
HERPUD1-219ENST00000570273 SLC25A21Q9BQT8 299 aaPredicted RBP12.64□□□□□ -0.39
HERPUD1-219ENST00000570273 C20orf85Q9H1P6 137 aa12.64□□□□□ -0.39
HERPUD1-219ENST00000570273 MMP28Q9H239 520 aa12.64□□□□□ -0.39
HERPUD1-219ENST00000570273 ITGB1BP2Q9UKP3 347 aa12.64□□□□□ -0.39
HERPUD1-219ENST00000570273 RBM7Q9Y580 266 aaKnown RBP12.64□□□□□ -0.39
HERPUD1-219ENST00000570273 NUBP2Q9Y5Y2 271 aa12.64□□□□□ -0.39
HERPUD1-219ENST00000570273 KPTNQ9Y664 436 aa12.64□□□□□ -0.39
HERPUD1-219ENST00000570273 MYO9AB2RTY4 2548 aa12.64□□□□□ -0.39
HERPUD1-219ENST00000570273 CELSR1Q9NYQ6 3014 aa12.64□□□□□ -0.39
HERPUD1-219ENST00000570273 CCDC168Q8NDH2 2452 aa12.64□□□□□ -0.39
HERPUD1-219ENST00000570273 VPS13CQ709C8 3753 aa12.63□□□□□ -0.39
HERPUD1-219ENST00000570273 IGKV1D-13A0A0B4J2D9 117 aa12.63□□□□□ -0.39
HERPUD1-219ENST00000570273 ARPC1BO15143 372 aaKnown RBP12.63□□□□□ -0.39
HERPUD1-219ENST00000570273 IGKV1-13P0DP09 117 aa12.63□□□□□ -0.39
HERPUD1-219ENST00000570273 ECI1P42126 302 aa12.63□□□□□ -0.39
HERPUD1-219ENST00000570273 GNG10P50151 68 aa12.63□□□□□ -0.39
HERPUD1-219ENST00000570273 BAMBIQ13145 260 aa12.63□□□□□ -0.39
HERPUD1-219ENST00000570273 MORN2Q502X0 79 aa12.63□□□□□ -0.39
HERPUD1-219ENST00000570273 METTL11BQ5VVY1 283 aa12.63□□□□□ -0.39
HERPUD1-219ENST00000570273 CCBE1Q6UXH8 406 aaPredicted RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms