RNA–Protein interactions for RNA: ENST00000569895.3

RBFOX1-219, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 3

Gene RBFOX1, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-219ENST00000569895 MRPL41Q8IXM3 137 aaKnown RBP17.78■□□□□ 0.44
RBFOX1-219ENST00000569895 Q8N9W7 124 aa17.78■□□□□ 0.44
RBFOX1-219ENST00000569895 ZNF439Q8NDP4 499 aa17.78■□□□□ 0.44
RBFOX1-219ENST00000569895 OR10V1Q8NGI7 309 aa17.78■□□□□ 0.44
RBFOX1-219ENST00000569895 OR1L1Q8NH94 360 aa17.78■□□□□ 0.44
RBFOX1-219ENST00000569895 CT45A3Q8NHU0 189 aa17.78■□□□□ 0.44
RBFOX1-219ENST00000569895 TFAP2CQ92754 450 aa17.78■□□□□ 0.44
RBFOX1-219ENST00000569895 S1PR3Q99500 378 aa17.78■□□□□ 0.44
RBFOX1-219ENST00000569895 MND1Q9BWT6 205 aa17.78■□□□□ 0.44
RBFOX1-219ENST00000569895 TAF9BQ9HBM6 251 aa17.78■□□□□ 0.44
RBFOX1-219ENST00000569895 FKBP14Q9NWM8 211 aa17.78■□□□□ 0.44
RBFOX1-219ENST00000569895 LRRC42Q9Y546 428 aa17.78■□□□□ 0.44
RBFOX1-219ENST00000569895 SLC31A2O15432 143 aa17.77■□□□□ 0.44
RBFOX1-219ENST00000569895 ZNF134P52741 427 aa17.77■□□□□ 0.44
RBFOX1-219ENST00000569895 ACSM3Q53FZ2 586 aa17.77■□□□□ 0.44
RBFOX1-219ENST00000569895 RNLSQ5VYX0 342 aa17.77■□□□□ 0.44
RBFOX1-219ENST00000569895 GLT8D1Q68CQ7 371 aa17.77■□□□□ 0.44
RBFOX1-219ENST00000569895 FAM53AQ6NSI3 398 aaPredicted RBP17.77■□□□□ 0.44
RBFOX1-219ENST00000569895 KLHL30-AS1Q8NEE0 82 aa17.77■□□□□ 0.44
RBFOX1-219ENST00000569895 NEDD4LQ96PU5 975 aa17.77■□□□□ 0.44
RBFOX1-219ENST00000569895 H0YHG0 523 aa17.76■□□□□ 0.43
RBFOX1-219ENST00000569895 LANCL1O43813 399 aa17.76■□□□□ 0.43
RBFOX1-219ENST00000569895 VHLP40337 213 aa17.76■□□□□ 0.43
RBFOX1-219ENST00000569895 GABPB1Q06547 395 aaPredicted RBP17.76■□□□□ 0.43
RBFOX1-219ENST00000569895 MORN2Q502X0 79 aa17.76■□□□□ 0.43
RBFOX1-219ENST00000569895 UNQ9370/PRO34162Q6UXP9 181 aa17.76■□□□□ 0.43
RBFOX1-219ENST00000569895 C8orf86Q6ZUL3 223 aa17.76■□□□□ 0.43
RBFOX1-219ENST00000569895 ZNF695Q8IW36 515 aa17.76■□□□□ 0.43
RBFOX1-219ENST00000569895 FAM46BQ96A09 425 aa17.76■□□□□ 0.43
RBFOX1-219ENST00000569895 PLSCR3Q9NRY6 295 aa17.76■□□□□ 0.43
RBFOX1-219ENST00000569895 MBNL3Q9NUK0 354 aaKnown RBP17.76■□□□□ 0.43
RBFOX1-219ENST00000569895 ZMAT5Q9UDW3 170 aaKnown RBP17.76■□□□□ 0.43
RBFOX1-219ENST00000569895 LINC01548A6NM66 108 aa17.75■□□□□ 0.43
RBFOX1-219ENST00000569895 RGS11O94810 467 aa17.75■□□□□ 0.43
RBFOX1-219ENST00000569895 CDK1P06493 297 aa17.75■□□□□ 0.43
RBFOX1-219ENST00000569895 CXorf66Q5JRM2 361 aaPredicted RBP17.75■□□□□ 0.43
RBFOX1-219ENST00000569895 SIGIRRQ6IA17 410 aa17.75■□□□□ 0.43
RBFOX1-219ENST00000569895 ETV3LQ6ZN32 361 aa17.75■□□□□ 0.43
RBFOX1-219ENST00000569895 PHYHIPQ92561 330 aa17.75■□□□□ 0.43
RBFOX1-219ENST00000569895 SCN3BQ9NY72 215 aa17.75■□□□□ 0.43
RBFOX1-219ENST00000569895 JPT1Q9UK76 154 aa17.75■□□□□ 0.43
RBFOX1-219ENST00000569895 ZNF736B4DX44 427 aaPredicted RBP17.74■□□□□ 0.43
RBFOX1-219ENST00000569895 PTGES3LE9PB15 166 aa17.74■□□□□ 0.43
RBFOX1-219ENST00000569895 SOX6P35712 828 aa17.74■□□□□ 0.43
RBFOX1-219ENST00000569895 HTD2P86397 168 aa17.74■□□□□ 0.43
RBFOX1-219ENST00000569895 EGFEM1PQ0D2K5 195 aa17.74■□□□□ 0.43
RBFOX1-219ENST00000569895 DEFB121Q5J5C9 76 aa17.74■□□□□ 0.43
RBFOX1-219ENST00000569895 NKAPLQ5M9Q1 402 aa17.74■□□□□ 0.43
RBFOX1-219ENST00000569895 GALMQ96C23 342 aa17.74■□□□□ 0.43
RBFOX1-219ENST00000569895 ELANEP08246 267 aa17.73■□□□□ 0.43
RBFOX1-219ENST00000569895 VDAC1P21796 283 aa17.73■□□□□ 0.43
RBFOX1-219ENST00000569895 GP2P55259 537 aaKnown RBP17.73■□□□□ 0.43
RBFOX1-219ENST00000569895 FOXE3Q13461 319 aa17.73■□□□□ 0.43
RBFOX1-219ENST00000569895 SPHARQ15513 63 aa17.73■□□□□ 0.43
RBFOX1-219ENST00000569895 RBM48Q5RL73 367 aaKnown RBP17.73■□□□□ 0.43
RBFOX1-219ENST00000569895 KCNG3Q8TAE7 436 aa17.73■□□□□ 0.43
RBFOX1-219ENST00000569895 MRPL30Q8TCC3 161 aaKnown RBP17.73■□□□□ 0.43
RBFOX1-219ENST00000569895 ABHD14AQ9BUJ0 271 aa17.73■□□□□ 0.43
RBFOX1-219ENST00000569895 TMED9Q9BVK6 235 aa17.73■□□□□ 0.43
RBFOX1-219ENST00000569895 ABRACLQ9P1F3 81 aa17.73■□□□□ 0.43
RBFOX1-219ENST00000569895 K7EIL1 84 aa17.72■□□□□ 0.43
RBFOX1-219ENST00000569895 YPEL1O60688 119 aa17.72■□□□□ 0.43
RBFOX1-219ENST00000569895 SRMP19623 302 aa17.72■□□□□ 0.43
RBFOX1-219ENST00000569895 F2RL1P55085 397 aa17.72■□□□□ 0.43
RBFOX1-219ENST00000569895 KRTAP10-11P60412 298 aa17.72■□□□□ 0.43
RBFOX1-219ENST00000569895 LSAMPQ13449 338 aa17.72■□□□□ 0.43
RBFOX1-219ENST00000569895 C1orf100Q5SVJ3 147 aa17.72■□□□□ 0.43
RBFOX1-219ENST00000569895 C6orf141Q5SZD1 244 aa17.72■□□□□ 0.43
RBFOX1-219ENST00000569895 C18orf65Q6ZTR6 163 aa17.72■□□□□ 0.43
RBFOX1-219ENST00000569895 CEACAM19Q7Z692 300 aa17.72■□□□□ 0.43
RBFOX1-219ENST00000569895 FAM71E2Q8N5Q1 922 aa17.72■□□□□ 0.43
RBFOX1-219ENST00000569895 OR52L2PQ8NGH6 319 aa17.72■□□□□ 0.43
RBFOX1-219ENST00000569895 YPEL2Q96QA6 119 aa17.72■□□□□ 0.43
RBFOX1-219ENST00000569895 P2RX4Q99571 388 aa17.72■□□□□ 0.43
RBFOX1-219ENST00000569895 CHCHD6Q9BRQ6 235 aa17.72■□□□□ 0.43
RBFOX1-219ENST00000569895 TMEM59Q9BXS4 323 aa17.72■□□□□ 0.43
RBFOX1-219ENST00000569895 DCLRE1BQ9H816 532 aa17.72■□□□□ 0.43
RBFOX1-219ENST00000569895 CCL24O00175 119 aa17.71■□□□□ 0.43
RBFOX1-219ENST00000569895 OR5H8P0DN80 308 aa17.71■□□□□ 0.43
RBFOX1-219ENST00000569895 VSIG8P0DPA2 414 aa17.71■□□□□ 0.43
RBFOX1-219ENST00000569895 HOXD3P31249 432 aaPredicted RBP17.71■□□□□ 0.43
RBFOX1-219ENST00000569895 RPS27AP62979 156 aaKnown RBP17.71■□□□□ 0.43
RBFOX1-219ENST00000569895 INSL4Q14641 139 aa17.71■□□□□ 0.43
RBFOX1-219ENST00000569895 MED22Q15528 200 aa17.71■□□□□ 0.43
RBFOX1-219ENST00000569895 HSD17B12Q53GQ0 312 aa17.71■□□□□ 0.43
RBFOX1-219ENST00000569895 LY6G6FQ5SQ64 297 aa17.71■□□□□ 0.43
RBFOX1-219ENST00000569895 LRRTM1Q86UE6 522 aa17.71■□□□□ 0.43
RBFOX1-219ENST00000569895 OR8U1Q8NH10 309 aa17.71■□□□□ 0.43
RBFOX1-219ENST00000569895 RPLP1P05386 114 aaKnown RBP17.7■□□□□ 0.42
RBFOX1-219ENST00000569895 CHATP28329 748 aa17.7■□□□□ 0.42
RBFOX1-219ENST00000569895 HTR2CP28335 458 aa17.7■□□□□ 0.42
RBFOX1-219ENST00000569895 PPP1CCP36873 323 aaKnown RBP17.7■□□□□ 0.42
RBFOX1-219ENST00000569895 CDX1P47902 265 aaPredicted RBP17.7■□□□□ 0.42
RBFOX1-219ENST00000569895 MMDQ15546 238 aa17.7■□□□□ 0.42
RBFOX1-219ENST00000569895 FAM27D1Q5T7N8 215 aa17.7■□□□□ 0.42
RBFOX1-219ENST00000569895 RNF152Q8N8N0 203 aa17.7■□□□□ 0.42
RBFOX1-219ENST00000569895 OR2AK2Q8NG84 335 aa17.7■□□□□ 0.42
RBFOX1-219ENST00000569895 ZNF251Q9BRH9 671 aa17.7■□□□□ 0.42
RBFOX1-219ENST00000569895 FAAP24Q9BTP7 215 aa17.7■□□□□ 0.42
RBFOX1-219ENST00000569895 STEAP1Q9UHE8 339 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms