RNA–Protein interactions for RNA: ENST00000569827.5

CAPN3-220, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-220ENST00000569827 A0A1W2PN81 502 aa9.32□□□□□ -0.92
CAPN3-220ENST00000569827 ORC5O43913 435 aa9.32□□□□□ -0.92
CAPN3-220ENST00000569827 SOX15O60248 233 aa9.32□□□□□ -0.92
CAPN3-220ENST00000569827 IGLV1-40P01703 118 aa9.32□□□□□ -0.92
CAPN3-220ENST00000569827 OR5H8P0DN80 308 aa9.32□□□□□ -0.92
CAPN3-220ENST00000569827 FCGR1AP12314 374 aa9.32□□□□□ -0.92
CAPN3-220ENST00000569827 GABRB1P18505 474 aa9.32□□□□□ -0.92
CAPN3-220ENST00000569827 CHRNA7P36544 502 aa9.32□□□□□ -0.92
CAPN3-220ENST00000569827 OR3A3P47888 321 aa9.32□□□□□ -0.92
CAPN3-220ENST00000569827 RAB9AP51151 201 aa9.32□□□□□ -0.92
CAPN3-220ENST00000569827 ZNF137PP52743 207 aa9.32□□□□□ -0.92
CAPN3-220ENST00000569827 GBX2P52951 348 aaPredicted RBP9.32□□□□□ -0.92
CAPN3-220ENST00000569827 MEDAGQ5VYS4 303 aa9.32□□□□□ -0.92
CAPN3-220ENST00000569827 OR52L2PQ8NGH6 319 aa9.32□□□□□ -0.92
CAPN3-220ENST00000569827 TRUB1Q8WWH5 349 aaKnown RBP9.32□□□□□ -0.92
CAPN3-220ENST00000569827 TMEM106AQ96A25 262 aa9.32□□□□□ -0.92
CAPN3-220ENST00000569827 CPNE2Q96FN4 548 aaPredicted RBP9.32□□□□□ -0.92
CAPN3-220ENST00000569827 IFT22Q9H7X7 185 aa9.32□□□□□ -0.92
CAPN3-220ENST00000569827 UBE2QL1A1L167 161 aa9.31□□□□□ -0.92
CAPN3-220ENST00000569827 TXNL1O43396 289 aa9.31□□□□□ -0.92
CAPN3-220ENST00000569827 PPP1CCP36873 323 aaKnown RBP9.31□□□□□ -0.92
CAPN3-220ENST00000569827 INSL3P51460 131 aa9.31□□□□□ -0.92
CAPN3-220ENST00000569827 RUNX1Q01196 453 aa9.31□□□□□ -0.92
CAPN3-220ENST00000569827 LRRC36Q1X8D7 754 aa9.31□□□□□ -0.92
CAPN3-220ENST00000569827 NHLRC3Q5JS37 347 aa9.31□□□□□ -0.92
CAPN3-220ENST00000569827 SLC25A30Q5SVS4 291 aa9.31□□□□□ -0.92
CAPN3-220ENST00000569827 OR2G6Q5TZ20 316 aa9.31□□□□□ -0.92
CAPN3-220ENST00000569827 ZNF429Q86V71 674 aa9.31□□□□□ -0.92
CAPN3-220ENST00000569827 ODF3L1Q8IXM7 274 aa9.31□□□□□ -0.92
CAPN3-220ENST00000569827 C8orf31Q8N9H6 132 aa9.31□□□□□ -0.92
CAPN3-220ENST00000569827 OR8H1Q8NGG4 311 aa9.31□□□□□ -0.92
CAPN3-220ENST00000569827 MUL1Q969V5 352 aa9.31□□□□□ -0.92
CAPN3-220ENST00000569827 MRPL48Q96GC5 212 aaKnown RBP9.31□□□□□ -0.92
CAPN3-220ENST00000569827 S100A13Q99584 98 aa9.31□□□□□ -0.92
CAPN3-220ENST00000569827 ZNF184Q99676 751 aaPredicted RBP9.31□□□□□ -0.92
CAPN3-220ENST00000569827 NABP2Q9BQ15 211 aa9.31□□□□□ -0.92
CAPN3-220ENST00000569827 FAM103A1Q9BTL3 118 aaKnown RBP9.31□□□□□ -0.92
CAPN3-220ENST00000569827 BANF2Q9H503 90 aa9.31□□□□□ -0.92
CAPN3-220ENST00000569827 ZMAT4Q9H898 229 aa9.31□□□□□ -0.92
CAPN3-220ENST00000569827 ETAA1Q9NY74 926 aa9.31□□□□□ -0.92
CAPN3-220ENST00000569827 IL36GQ9NZH8 169 aa9.31□□□□□ -0.92
CAPN3-220ENST00000569827 ORC6Q9Y5N6 252 aa9.31□□□□□ -0.92
CAPN3-220ENST00000569827 GMPPBQ9Y5P6 360 aa9.31□□□□□ -0.92
CAPN3-220ENST00000569827 TRAV8-7A0A075B6U6 113 aa9.3□□□□□ -0.92
CAPN3-220ENST00000569827 A0A1W2PPK0 400 aa9.3□□□□□ -0.92
CAPN3-220ENST00000569827 LINC01619G3V211 115 aa9.3□□□□□ -0.92
CAPN3-220ENST00000569827 NBR2O15453 112 aa9.3□□□□□ -0.92
CAPN3-220ENST00000569827 SPINT2O43291 252 aa9.3□□□□□ -0.92
CAPN3-220ENST00000569827 HLA-DRB1P01911 266 aa9.3□□□□□ -0.92
CAPN3-220ENST00000569827 CD2P06729 351 aa9.3□□□□□ -0.92
CAPN3-220ENST00000569827 LIMS3P0CW19 117 aa9.3□□□□□ -0.92
CAPN3-220ENST00000569827 LIMS4P0CW20 117 aa9.3□□□□□ -0.92
CAPN3-220ENST00000569827 BDKRB2P30411 391 aa9.3□□□□□ -0.92
CAPN3-220ENST00000569827 PPP3R1P63098 170 aa9.3□□□□□ -0.92
CAPN3-220ENST00000569827 C5orf64Q2M2E5 130 aa9.3□□□□□ -0.92
CAPN3-220ENST00000569827 MPV17LQ2QL34 196 aa9.3□□□□□ -0.92
CAPN3-220ENST00000569827 RAB12Q6IQ22 244 aa9.3□□□□□ -0.92
CAPN3-220ENST00000569827 STX19Q8N4C7 294 aa9.3□□□□□ -0.92
CAPN3-220ENST00000569827 ZFP41Q8N8Y5 198 aa9.3□□□□□ -0.92
CAPN3-220ENST00000569827 GPR148Q8TDV2 347 aa9.3□□□□□ -0.92
CAPN3-220ENST00000569827 ABHD5Q8WTS1 349 aa9.3□□□□□ -0.92
CAPN3-220ENST00000569827 APH1BQ8WW43 257 aa9.3□□□□□ -0.92
CAPN3-220ENST00000569827 MS4A10Q96PG2 267 aa9.3□□□□□ -0.92
CAPN3-220ENST00000569827 CITED4Q96RK1 184 aa9.3□□□□□ -0.92
CAPN3-220ENST00000569827 ZNF251Q9BRH9 671 aa9.3□□□□□ -0.92
CAPN3-220ENST00000569827 ABHD14AQ9BUJ0 271 aa9.3□□□□□ -0.92
CAPN3-220ENST00000569827 TOLLIPQ9H0E2 274 aa9.3□□□□□ -0.92
CAPN3-220ENST00000569827 TAF9BQ9HBM6 251 aa9.3□□□□□ -0.92
CAPN3-220ENST00000569827 TMEM138Q9NPI0 162 aa9.3□□□□□ -0.92
CAPN3-220ENST00000569827 OR2S2Q9NQN1 319 aa9.3□□□□□ -0.92
CAPN3-220ENST00000569827 GAB2Q9UQC2 676 aa9.3□□□□□ -0.92
CAPN3-220ENST00000569827 FRAS1Q86XX4 4008 aa9.3□□□□□ -0.92
CAPN3-220ENST00000569827 FAM90A10PA6NDY2 464 aa9.29□□□□□ -0.92
CAPN3-220ENST00000569827 MCRIP1C9JLW8 97 aa9.29□□□□□ -0.92
CAPN3-220ENST00000569827 LANCL1O43813 399 aa9.29□□□□□ -0.92
CAPN3-220ENST00000569827 FADS2O95864 444 aaKnown RBP9.29□□□□□ -0.92
CAPN3-220ENST00000569827 LALBAP00709 142 aa9.29□□□□□ -0.92
CAPN3-220ENST00000569827 IGHV4-30-4P0DP06 118 aa9.29□□□□□ -0.92
CAPN3-220ENST00000569827 ETV1P50549 477 aa9.29□□□□□ -0.92
CAPN3-220ENST00000569827 SMN1Q16637 294 aaKnown RBP9.29□□□□□ -0.92
CAPN3-220ENST00000569827 MORN2Q502X0 79 aa9.29□□□□□ -0.92
CAPN3-220ENST00000569827 ACSM6Q6P461 480 aa9.29□□□□□ -0.92
CAPN3-220ENST00000569827 FAM131AQ6UXB0 335 aa9.29□□□□□ -0.92
CAPN3-220ENST00000569827 GLDNQ6ZMI3 551 aaPredicted RBP9.29□□□□□ -0.92
CAPN3-220ENST00000569827 CBR4Q8N4T8 237 aa9.29□□□□□ -0.92
CAPN3-220ENST00000569827 OR6Q1Q8NGQ2 317 aa9.29□□□□□ -0.92
CAPN3-220ENST00000569827 TM2D3Q9BRN9 247 aa9.29□□□□□ -0.92
CAPN3-220ENST00000569827 RSRP1Q9BUV0 290 aa9.29□□□□□ -0.92
CAPN3-220ENST00000569827 FBXL15Q9H469 300 aa9.29□□□□□ -0.92
CAPN3-220ENST00000569827 EDA2RQ9HAV5 297 aa9.29□□□□□ -0.92
CAPN3-220ENST00000569827 TPSG1Q9NRR2 321 aa9.29□□□□□ -0.92
CAPN3-220ENST00000569827 RCC2Q9P258 522 aaKnown RBP9.29□□□□□ -0.92
CAPN3-220ENST00000569827 KIAA1456Q9P272 454 aa9.29□□□□□ -0.92
CAPN3-220ENST00000569827 ZNF580Q9UK33 172 aa9.29□□□□□ -0.92
CAPN3-220ENST00000569827 MRPS28Q9Y2Q9 187 aaKnown RBP9.29□□□□□ -0.92
CAPN3-220ENST00000569827 PEX16Q9Y5Y5 336 aa9.29□□□□□ -0.92
CAPN3-220ENST00000569827 SAA2-SAA4A0A096LPE2 208 aa9.28□□□□□ -0.92
CAPN3-220ENST00000569827 PNMA8CA0A1B0GUJ8 204 aa9.28□□□□□ -0.92
CAPN3-220ENST00000569827 SNTNA6NMZ2 147 aa9.28□□□□□ -0.92
CAPN3-220ENST00000569827 H3BNX3 289 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms