RNA–Protein interactions for RNA: ENST00000569050.1

PKM-223, Transcript of pyruvate kinase M1/2, human

TSL 4

Gene PKM, Length 457 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKM-223	ENST00000569050	RHOF	Q9HBH0	211 aa		12.88	□□□□□ -0.35
PKM-223	ENST00000569050	NEK6	Q9HC98	313 aa		12.88	□□□□□ -0.35
PKM-223	ENST00000569050		A0A1W2PN81	502 aa		12.87	□□□□□ -0.35
PKM-223	ENST00000569050	KRT8	P05787	483 aa		12.87	□□□□□ -0.35
PKM-223	ENST00000569050	IL3RA	P26951	378 aa		12.87	□□□□□ -0.35
PKM-223	ENST00000569050	CHRNA7	P36544	502 aa		12.87	□□□□□ -0.35
PKM-223	ENST00000569050	NDP	Q00604	133 aa		12.87	□□□□□ -0.35
PKM-223	ENST00000569050	TMED1	Q13445	227 aa		12.87	□□□□□ -0.35
PKM-223	ENST00000569050	ECSCR	Q19T08	205 aa		12.87	□□□□□ -0.35
PKM-223	ENST00000569050	GTSCR1	Q86UQ5	136 aa		12.87	□□□□□ -0.35
PKM-223	ENST00000569050	SAXO1	Q8IYX7	474 aa		12.87	□□□□□ -0.35
PKM-223	ENST00000569050	C8orf31	Q8N9H6	132 aa		12.87	□□□□□ -0.35
PKM-223	ENST00000569050	FBXO7	Q9Y3I1	522 aa		12.87	□□□□□ -0.35
PKM-223	ENST00000569050	PKHD1	P08F94	4074 aa		12.87	□□□□□ -0.35
PKM-223	ENST00000569050	IGHV3-43	A0A0B4J1X8	118 aa		12.86	□□□□□ -0.35
PKM-223	ENST00000569050	C15orf65	H3BRN8	121 aa		12.86	□□□□□ -0.35
PKM-223	ENST00000569050	SDCBP	O00560	298 aa	Predicted RBP	12.86	□□□□□ -0.35
PKM-223	ENST00000569050	TXNL1	O43396	289 aa		12.86	□□□□□ -0.35
PKM-223	ENST00000569050	DEDD	O75618	318 aa		12.86	□□□□□ -0.35
PKM-223	ENST00000569050	RGS11	O94810	467 aa		12.86	□□□□□ -0.35
PKM-223	ENST00000569050	OR2T7	P0C7T2	308 aa		12.86	□□□□□ -0.35
PKM-223	ENST00000569050	IGHV3-43D	P0DP04	118 aa		12.86	□□□□□ -0.35
PKM-223	ENST00000569050	ZNF137P	P52743	207 aa		12.86	□□□□□ -0.35
PKM-223	ENST00000569050	ZNF85	Q03923	595 aa		12.86	□□□□□ -0.35
PKM-223	ENST00000569050	TP53I3	Q53FA7	332 aa		12.86	□□□□□ -0.35
PKM-223	ENST00000569050	FAM220A	Q7Z4H9	259 aa		12.86	□□□□□ -0.35
PKM-223	ENST00000569050	FGGY	Q96C11	551 aa		12.86	□□□□□ -0.35
PKM-223	ENST00000569050	RITA1	Q96K30	269 aa		12.86	□□□□□ -0.35
PKM-223	ENST00000569050	NR1H4	Q96RI1	486 aa	Predicted RBP	12.86	□□□□□ -0.35
PKM-223	ENST00000569050	GFOD1	Q9NXC2	390 aa		12.86	□□□□□ -0.35
PKM-223	ENST00000569050	GNG8	Q9UK08	70 aa		12.86	□□□□□ -0.35
PKM-223	ENST00000569050	FOXA2	Q9Y261	457 aa	Predicted RBP	12.86	□□□□□ -0.35
PKM-223	ENST00000569050	DAPL1	A0PJW8	107 aa		12.85	□□□□□ -0.35
PKM-223	ENST00000569050		H0Y980	276 aa		12.85	□□□□□ -0.35
PKM-223	ENST00000569050	UBC	P0CG48	685 aa	Known RBP	12.85	□□□□□ -0.35
PKM-223	ENST00000569050	LSAMP	Q13449	338 aa		12.85	□□□□□ -0.35
PKM-223	ENST00000569050	PMS2P11	Q13670	270 aa		12.85	□□□□□ -0.35
PKM-223	ENST00000569050	IL34	Q6ZMJ4	242 aa		12.85	□□□□□ -0.35
PKM-223	ENST00000569050	SLC25A48	Q6ZT89	311 aa	Known RBP	12.85	□□□□□ -0.35
PKM-223	ENST00000569050	OR52M1	Q8NGK5	317 aa		12.85	□□□□□ -0.35
PKM-223	ENST00000569050	OR52I1	Q8NGK6	324 aa		12.85	□□□□□ -0.35
PKM-223	ENST00000569050	ANKRD60	Q9BZ19	345 aa		12.85	□□□□□ -0.35
PKM-223	ENST00000569050	PLEKHA3	Q9HB20	300 aa		12.85	□□□□□ -0.35
PKM-223	ENST00000569050	RPL36	Q9Y3U8	105 aa	Known RBP	12.85	□□□□□ -0.35
PKM-223	ENST00000569050	METTL15	A6NJ78	407 aa		12.84	□□□□□ -0.35
PKM-223	ENST00000569050	OCM2	P0CE71	109 aa		12.84	□□□□□ -0.35
PKM-223	ENST00000569050	OCM	P0CE72	109 aa	Predicted RBP	12.84	□□□□□ -0.35
PKM-223	ENST00000569050	ZNF20	P17024	532 aa		12.84	□□□□□ -0.35
PKM-223	ENST00000569050	ACTB	P60709	375 aa		12.84	□□□□□ -0.35
PKM-223	ENST00000569050	RAB40B	Q12829	278 aa		12.84	□□□□□ -0.35
PKM-223	ENST00000569050	ZNF439	Q8NDP4	499 aa		12.84	□□□□□ -0.35
PKM-223	ENST00000569050	OR13C9	Q8NGT0	318 aa		12.84	□□□□□ -0.35
PKM-223	ENST00000569050	ARL11	Q969Q4	196 aa		12.84	□□□□□ -0.35
PKM-223	ENST00000569050	ZNF581	Q9P0T4	197 aa		12.84	□□□□□ -0.35
PKM-223	ENST00000569050	EXOG	Q9Y2C4	368 aa	Known RBP	12.84	□□□□□ -0.35
PKM-223	ENST00000569050	DYNC1H1	Q14204	4646 aa	Known RBP	12.84	□□□□□ -0.35
PKM-223	ENST00000569050	FAT2	Q9NYQ8	4349 aa		12.83	□□□□□ -0.36
PKM-223	ENST00000569050	SHISA3	A0PJX4	238 aa		12.83	□□□□□ -0.36
PKM-223	ENST00000569050	IZUMO1R	A6ND01	250 aa		12.83	□□□□□ -0.36
PKM-223	ENST00000569050	ARPC1B	O15143	372 aa	Known RBP	12.83	□□□□□ -0.36
PKM-223	ENST00000569050	MT-ND2	P03891	347 aa		12.83	□□□□□ -0.36
PKM-223	ENST00000569050	KCNJ3	P48549	501 aa		12.83	□□□□□ -0.36
PKM-223	ENST00000569050	CRIP2	P52943	208 aa	Predicted RBP	12.83	□□□□□ -0.36
PKM-223	ENST00000569050	C5orf64	Q2M2E5	130 aa		12.83	□□□□□ -0.36
PKM-223	ENST00000569050	AHSA2	Q719I0	299 aa		12.83	□□□□□ -0.36
PKM-223	ENST00000569050	LHFPL3	Q86UP9	236 aa		12.83	□□□□□ -0.36
PKM-223	ENST00000569050	ACBD7	Q8N6N7	88 aa		12.83	□□□□□ -0.36
PKM-223	ENST00000569050	BPIFB6	Q8NFQ5	453 aa		12.83	□□□□□ -0.36
PKM-223	ENST00000569050	OR10AC1	Q8NH08	325 aa		12.83	□□□□□ -0.36
PKM-223	ENST00000569050	TMEM106A	Q96A25	262 aa		12.83	□□□□□ -0.36
PKM-223	ENST00000569050	RHOV	Q96L33	236 aa		12.83	□□□□□ -0.36
PKM-223	ENST00000569050	CNBD2	Q96M20	576 aa		12.83	□□□□□ -0.36
PKM-223	ENST00000569050	ALG8	Q9BVK2	526 aa		12.83	□□□□□ -0.36
PKM-223	ENST00000569050	CXorf65	A6NEN9	183 aa		12.82	□□□□□ -0.36
PKM-223	ENST00000569050		J3QLW9	94 aa		12.82	□□□□□ -0.36
PKM-223	ENST00000569050		J3QRE1	110 aa		12.82	□□□□□ -0.36
PKM-223	ENST00000569050	NBR2	O15453	112 aa		12.82	□□□□□ -0.36
PKM-223	ENST00000569050	FADS2	O95864	444 aa	Known RBP	12.82	□□□□□ -0.36
PKM-223	ENST00000569050	TMEM225B	P0DP42	221 aa		12.82	□□□□□ -0.36
PKM-223	ENST00000569050	ZNF19	P17023	458 aa		12.82	□□□□□ -0.36
PKM-223	ENST00000569050	HSPA13	P48723	471 aa		12.82	□□□□□ -0.36
PKM-223	ENST00000569050	ZNF134	P52741	427 aa		12.82	□□□□□ -0.36
PKM-223	ENST00000569050	LAIR2	Q6ISS4	152 aa		12.82	□□□□□ -0.36
PKM-223	ENST00000569050	C4orf36	Q96KX1	117 aa		12.82	□□□□□ -0.36
PKM-223	ENST00000569050	A3GALT2	U3KPV4	340 aa		12.82	□□□□□ -0.36
PKM-223	ENST00000569050	DNAH2	Q9P225	4427 aa		12.82	□□□□□ -0.36
PKM-223	ENST00000569050	SULT1C4	O75897	302 aa		12.81	□□□□□ -0.36
PKM-223	ENST00000569050	GZMH	P20718	246 aa		12.81	□□□□□ -0.36
PKM-223	ENST00000569050	TPPP2	P59282	170 aa		12.81	□□□□□ -0.36
PKM-223	ENST00000569050	IL13RA2	Q14627	380 aa		12.81	□□□□□ -0.36
PKM-223	ENST00000569050	PIGY	Q3MUY2	71 aa		12.81	□□□□□ -0.36
PKM-223	ENST00000569050		Q3ZCU0	254 aa		12.81	□□□□□ -0.36
PKM-223	ENST00000569050	CT45A1	Q5HYN5	189 aa		12.81	□□□□□ -0.36
PKM-223	ENST00000569050	ELP2	Q6IA86	826 aa		12.81	□□□□□ -0.36
PKM-223	ENST00000569050	LIN54	Q6MZP7	749 aa		12.81	□□□□□ -0.36
PKM-223	ENST00000569050	TCTEX1D1	Q8N7M0	179 aa		12.81	□□□□□ -0.36
PKM-223	ENST00000569050	OR9G4	Q8NGQ1	327 aa		12.81	□□□□□ -0.36
PKM-223	ENST00000569050	CT45A3	Q8NHU0	189 aa		12.81	□□□□□ -0.36
PKM-223	ENST00000569050	MS4A10	Q96PG2	267 aa		12.81	□□□□□ -0.36
PKM-223	ENST00000569050	ZNF251	Q9BRH9	671 aa		12.81	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms