RNA–Protein interactions for RNA: ENST00000567654.1

SF3B3-210, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 334 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-210ENST00000567654 LHBP01229 141 aa4.77□□□□□ -1.65
SF3B3-210ENST00000567654 OR4A8P0C604 315 aa4.77□□□□□ -1.65
SF3B3-210ENST00000567654 PSG2P11465 335 aa4.77□□□□□ -1.65
SF3B3-210ENST00000567654 PGAM2P15259 253 aa4.77□□□□□ -1.65
SF3B3-210ENST00000567654 PPP3CBP16298 524 aa4.77□□□□□ -1.65
SF3B3-210ENST00000567654 GNLYP22749 145 aa4.77□□□□□ -1.65
SF3B3-210ENST00000567654 DNASE1P24855 282 aa4.77□□□□□ -1.65
SF3B3-210ENST00000567654 LMO1P25800 156 aa4.77□□□□□ -1.65
SF3B3-210ENST00000567654 CD34P28906 385 aa4.77□□□□□ -1.65
SF3B3-210ENST00000567654 ZNF81P51508 661 aa4.77□□□□□ -1.65
SF3B3-210ENST00000567654 RPS23P62266 143 aaKnown RBP4.77□□□□□ -1.65
SF3B3-210ENST00000567654 MRPS15P82914 257 aaKnown RBP4.77□□□□□ -1.65
SF3B3-210ENST00000567654 COL10A1Q03692 680 aa4.77□□□□□ -1.65
SF3B3-210ENST00000567654 HMGN3Q15651 99 aa4.77□□□□□ -1.65
SF3B3-210ENST00000567654 SPIN3Q5JUX0 258 aa4.77□□□□□ -1.65
SF3B3-210ENST00000567654 SHEQ5VZ18 495 aa4.77□□□□□ -1.65
SF3B3-210ENST00000567654 DHRS11Q6UWP2 260 aa4.77□□□□□ -1.65
SF3B3-210ENST00000567654 CLEC18BQ6UXF7 455 aa4.77□□□□□ -1.65
SF3B3-210ENST00000567654 ZNF497Q6ZNH5 498 aa4.77□□□□□ -1.65
SF3B3-210ENST00000567654 TMEM17Q86X19 198 aa4.77□□□□□ -1.65
SF3B3-210ENST00000567654 FAM219AQ8IW50 185 aa4.77□□□□□ -1.65
SF3B3-210ENST00000567654 Q8IYB0 196 aa4.77□□□□□ -1.65
SF3B3-210ENST00000567654 C1orf174Q8IYL3 243 aa4.77□□□□□ -1.65
SF3B3-210ENST00000567654 FGFRL1Q8N441 504 aa4.77□□□□□ -1.65
SF3B3-210ENST00000567654 SPERTQ8NA61 448 aa4.77□□□□□ -1.65
SF3B3-210ENST00000567654 OR5M8Q8NGP6 311 aa4.77□□□□□ -1.65
SF3B3-210ENST00000567654 OR10Z1Q8NGY1 313 aa4.77□□□□□ -1.65
SF3B3-210ENST00000567654 LILRB4Q8NHJ6 448 aa4.77□□□□□ -1.65
SF3B3-210ENST00000567654 ZFAND1Q8TCF1 268 aa4.77□□□□□ -1.65
SF3B3-210ENST00000567654 MITD1Q8WV92 249 aa4.77□□□□□ -1.65
SF3B3-210ENST00000567654 RNASE6Q93091 150 aaKnown RBP4.77□□□□□ -1.65
SF3B3-210ENST00000567654 TOMM40LQ969M1 308 aa4.77□□□□□ -1.65
SF3B3-210ENST00000567654 MOB3AQ96BX8 217 aa4.77□□□□□ -1.65
SF3B3-210ENST00000567654 OR2A7Q96R45 310 aa4.77□□□□□ -1.65
SF3B3-210ENST00000567654 DCTN5Q9BTE1 182 aa4.77□□□□□ -1.65
SF3B3-210ENST00000567654 SHARPINQ9H0F6 387 aa4.77□□□□□ -1.65
SF3B3-210ENST00000567654 RHOFQ9HBH0 211 aa4.77□□□□□ -1.65
SF3B3-210ENST00000567654 OR1A1Q9P1Q5 309 aa4.77□□□□□ -1.65
SF3B3-210ENST00000567654 OPN4Q9UHM6 478 aa4.77□□□□□ -1.65
SF3B3-210ENST00000567654 IGSF10Q6WRI0 2623 aa4.77□□□□□ -1.65
SF3B3-210ENST00000567654 VPS13CQ709C8 3753 aa4.76□□□□□ -1.65
SF3B3-210ENST00000567654 TRBV6-7A0A0A0MS04 114 aa4.76□□□□□ -1.65
SF3B3-210ENST00000567654 PLSCR5A0PG75 271 aa4.76□□□□□ -1.65
SF3B3-210ENST00000567654 TMEM8BA6NDV4 472 aa4.76□□□□□ -1.65
SF3B3-210ENST00000567654 CRYM-AS1A6NIL9 109 aa4.76□□□□□ -1.65
SF3B3-210ENST00000567654 C17orf100A8MU93 164 aa4.76□□□□□ -1.65
SF3B3-210ENST00000567654 DEFB108AA8MXU0 73 aa4.76□□□□□ -1.65
SF3B3-210ENST00000567654 PRSS44E7EML9 344 aa4.76□□□□□ -1.65
SF3B3-210ENST00000567654 C19orf84I3L1E1 186 aa4.76□□□□□ -1.65
SF3B3-210ENST00000567654 SH2D1BO14796 132 aa4.76□□□□□ -1.65
SF3B3-210ENST00000567654 BET1O15155 118 aa4.76□□□□□ -1.65
SF3B3-210ENST00000567654 ZNF737O75373 536 aa4.76□□□□□ -1.65
SF3B3-210ENST00000567654 TUSC2O75896 110 aa4.76□□□□□ -1.65
SF3B3-210ENST00000567654 FSHBP01225 129 aa4.76□□□□□ -1.65
SF3B3-210ENST00000567654 PPYP01298 95 aa4.76□□□□□ -1.65
SF3B3-210ENST00000567654 GLAP06280 429 aa4.76□□□□□ -1.65
SF3B3-210ENST00000567654 CTSDP07339 412 aaPredicted RBP4.76□□□□□ -1.65
SF3B3-210ENST00000567654 GIPP09681 153 aaPredicted RBP4.76□□□□□ -1.65
SF3B3-210ENST00000567654 ZNF728P0DKX0 622 aa4.76□□□□□ -1.65
SF3B3-210ENST00000567654 CXCL2P19875 107 aa4.76□□□□□ -1.65
SF3B3-210ENST00000567654 GLIPR1P48060 266 aa4.76□□□□□ -1.65
SF3B3-210ENST00000567654 KCNJ3P48549 501 aa4.76□□□□□ -1.65
SF3B3-210ENST00000567654 CASP6P55212 293 aa4.76□□□□□ -1.65
SF3B3-210ENST00000567654 PIGPP57054 158 aa4.76□□□□□ -1.65
SF3B3-210ENST00000567654 TAS2R31P59538 309 aa4.76□□□□□ -1.65
SF3B3-210ENST00000567654 SEC61A1P61619 476 aaKnown RBP4.76□□□□□ -1.65
SF3B3-210ENST00000567654 TNFAIP6P98066 277 aaPredicted RBP4.76□□□□□ -1.65
SF3B3-210ENST00000567654 AESQ08117 197 aa4.76□□□□□ -1.65
SF3B3-210ENST00000567654 SRSF7Q16629 238 aaKnown RBP eCLIP4.76□□□□□ -1.65
SF3B3-210ENST00000567654 BEAN1Q3B7T3 259 aa4.76□□□□□ -1.65
SF3B3-210ENST00000567654 LGALSLQ3ZCW2 172 aaPredicted RBP4.76□□□□□ -1.65
SF3B3-210ENST00000567654 PHLDA2Q53GA4 152 aa4.76□□□□□ -1.65
SF3B3-210ENST00000567654 UTF1Q5T230 341 aa4.76□□□□□ -1.65
SF3B3-210ENST00000567654 C1QTNF12Q5T7M4 302 aa4.76□□□□□ -1.65
SF3B3-210ENST00000567654 KCTD9Q7L273 389 aa4.76□□□□□ -1.65
SF3B3-210ENST00000567654 ZBTB8BQ8NAP8 495 aaPredicted RBP4.76□□□□□ -1.65
SF3B3-210ENST00000567654 OR2T35Q8NGX2 323 aa4.76□□□□□ -1.65
SF3B3-210ENST00000567654 OR1L1Q8NH94 360 aa4.76□□□□□ -1.65
SF3B3-210ENST00000567654 LHFPL5Q8TAF8 219 aa4.76□□□□□ -1.65
SF3B3-210ENST00000567654 C5orf30Q96GV9 206 aa4.76□□□□□ -1.65
SF3B3-210ENST00000567654 SEC22AQ96IW7 307 aa4.76□□□□□ -1.65
SF3B3-210ENST00000567654 CABLES2Q9BTV7 478 aa4.76□□□□□ -1.65
SF3B3-210ENST00000567654 SPACA1Q9HBV2 294 aa4.76□□□□□ -1.65
SF3B3-210ENST00000567654 RASL12Q9NYN1 266 aa4.76□□□□□ -1.65
SF3B3-210ENST00000567654 FAM30AQ9NZY2 134 aa4.76□□□□□ -1.65
SF3B3-210ENST00000567654 IL19Q9UHD0 177 aa4.76□□□□□ -1.65
SF3B3-210ENST00000567654 KIF25Q9UIL4 384 aa4.76□□□□□ -1.65
SF3B3-210ENST00000567654 MGAT4AQ9UM21 535 aa4.76□□□□□ -1.65
SF3B3-210ENST00000567654 WIPI2Q9Y4P8 454 aa4.76□□□□□ -1.65
SF3B3-210ENST00000567654 MAB21L2Q9Y586 359 aa4.76□□□□□ -1.65
SF3B3-210ENST00000567654 ZFHX3Q15911 3703 aa4.76□□□□□ -1.65
SF3B3-210ENST00000567654 ANKHD1Q8IWZ3 2542 aaKnown RBP4.76□□□□□ -1.65
SF3B3-210ENST00000567654 CACNA1BQ00975 2339 aa4.75□□□□□ -1.65
SF3B3-210ENST00000567654 A0A1W2PPR1 153 aa4.75□□□□□ -1.65
SF3B3-210ENST00000567654 C12orf77C9JDV5 145 aa4.75□□□□□ -1.65
SF3B3-210ENST00000567654 DIRC3C9JPN6 131 aa4.75□□□□□ -1.65
SF3B3-210ENST00000567654 HSD17B6O14756 317 aa4.75□□□□□ -1.65
SF3B3-210ENST00000567654 TPD52L2O43399 206 aaKnown RBP4.75□□□□□ -1.65
SF3B3-210ENST00000567654 ZG16O60844 167 aa4.75□□□□□ -1.65
SF3B3-210ENST00000567654 DUS4LO95620 317 aaKnown RBP4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms