RNA–Protein interactions for RNA: ENST00000566339.5

SPSB3-208, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-208ENST00000566339 TNRC6AQ8NDV7 1962 aaKnown RBP18.41■□□□□ 0.54
SPSB3-208ENST00000566339 OR5B21A6NL26 309 aa18.41■□□□□ 0.54
SPSB3-208ENST00000566339 TDGF1P13385 188 aa18.41■□□□□ 0.54
SPSB3-208ENST00000566339 LYSMD4Q5XG99 296 aa18.41■□□□□ 0.54
SPSB3-208ENST00000566339 TCEAL6Q6IPX3 200 aa18.41■□□□□ 0.54
SPSB3-208ENST00000566339 NEK7Q8TDX7 302 aa18.41■□□□□ 0.54
SPSB3-208ENST00000566339 FRZBQ92765 325 aa18.41■□□□□ 0.54
SPSB3-208ENST00000566339 ZNF845Q96IR2 970 aaPredicted RBP18.41■□□□□ 0.54
SPSB3-208ENST00000566339 PKIBQ9C010 78 aa18.41■□□□□ 0.54
SPSB3-208ENST00000566339 MTCH1Q9NZJ7 389 aa18.41■□□□□ 0.54
SPSB3-208ENST00000566339 MPC1Q9Y5U8 109 aa18.41■□□□□ 0.54
SPSB3-208ENST00000566339 GVINP1Q7Z2Y8 2422 aa18.41■□□□□ 0.54
SPSB3-208ENST00000566339 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP18.4■□□□□ 0.54
SPSB3-208ENST00000566339 ZFP36L1Q07352 338 aaKnown RBP18.4■□□□□ 0.54
SPSB3-208ENST00000566339 CYP2G1PQ6ZSU1 146 aa18.4■□□□□ 0.54
SPSB3-208ENST00000566339 YRDCQ86U90 279 aaKnown RBP18.4■□□□□ 0.54
SPSB3-208ENST00000566339 NAXEQ8NCW5 288 aa18.4■□□□□ 0.54
SPSB3-208ENST00000566339 CPEB3Q8NE35 698 aaKnown RBP18.4■□□□□ 0.54
SPSB3-208ENST00000566339 OR10V1Q8NGI7 309 aa18.4■□□□□ 0.54
SPSB3-208ENST00000566339 PSMF1Q92530 271 aa18.4■□□□□ 0.54
SPSB3-208ENST00000566339 GPR61Q9BZJ8 451 aa18.4■□□□□ 0.54
SPSB3-208ENST00000566339 LRFN1Q9P244 771 aa18.4■□□□□ 0.54
SPSB3-208ENST00000566339 CD300LBA8K4G0 201 aa18.4■□□□□ 0.54
SPSB3-208ENST00000566339 TMEM250H0YL14 139 aa18.4■□□□□ 0.54
SPSB3-208ENST00000566339 FOLR3P41439 243 aa18.4■□□□□ 0.54
SPSB3-208ENST00000566339 ATP6V1FQ16864 119 aa18.4■□□□□ 0.54
SPSB3-208ENST00000566339 C9orf152Q5JTZ5 239 aa18.4■□□□□ 0.54
SPSB3-208ENST00000566339 ZNF573Q86YE8 665 aa18.4■□□□□ 0.54
SPSB3-208ENST00000566339 OR10A7Q8NGE5 316 aa18.4■□□□□ 0.54
SPSB3-208ENST00000566339 LIN7CQ9NUP9 197 aaKnown RBP18.4■□□□□ 0.54
SPSB3-208ENST00000566339 PSENENQ9NZ42 101 aa18.4■□□□□ 0.54
SPSB3-208ENST00000566339 OR14J1Q9UGF5 321 aa18.4■□□□□ 0.54
SPSB3-208ENST00000566339 DCHS1Q96JQ0 3298 aa18.39■□□□□ 0.53
SPSB3-208ENST00000566339 G3V3Y1 287 aa18.39■□□□□ 0.53
SPSB3-208ENST00000566339 TMEM183AQ8IXX5 376 aa18.39■□□□□ 0.53
SPSB3-208ENST00000566339 WDR61Q9GZS3 305 aaKnown RBP18.39■□□□□ 0.53
SPSB3-208ENST00000566339 FGF23Q9GZV9 251 aaPredicted RBP18.39■□□□□ 0.53
SPSB3-208ENST00000566339 SMOC1Q9H4F8 434 aa18.39■□□□□ 0.53
SPSB3-208ENST00000566339 OTOGLQ3ZCN5 2332 aa18.39■□□□□ 0.53
SPSB3-208ENST00000566339 SMCO3A2RU48 225 aa18.38■□□□□ 0.53
SPSB3-208ENST00000566339 LRRC3CA6NJW4 275 aa18.38■□□□□ 0.53
SPSB3-208ENST00000566339 MKRN2OSH3BPM6 223 aa18.38■□□□□ 0.53
SPSB3-208ENST00000566339 PRSS12P56730 875 aa18.38■□□□□ 0.53
SPSB3-208ENST00000566339 P4HA3Q7Z4N8 544 aa18.38■□□□□ 0.53
SPSB3-208ENST00000566339 RNASE11Q8TAA1 199 aaKnown RBP18.38■□□□□ 0.53
SPSB3-208ENST00000566339 ZNF665Q9H7R5 613 aa18.38■□□□□ 0.53
SPSB3-208ENST00000566339 SDK1Q7Z5N4 2213 aa18.38■□□□□ 0.53
SPSB3-208ENST00000566339 SHANK1Q9Y566 2161 aa18.38■□□□□ 0.53
SPSB3-208ENST00000566339 A0A0G2JRQ6 117 aa18.37■□□□□ 0.53
SPSB3-208ENST00000566339 RNF212BA8MTL3 300 aa18.37■□□□□ 0.53
SPSB3-208ENST00000566339 MBP02144 154 aa18.37■□□□□ 0.53
SPSB3-208ENST00000566339 ARR3P36575 388 aa18.37■□□□□ 0.53
SPSB3-208ENST00000566339 GPM6AP51674 278 aa18.37■□□□□ 0.53
SPSB3-208ENST00000566339 WDR25Q64LD2 544 aaPredicted RBP18.37■□□□□ 0.53
SPSB3-208ENST00000566339 ZFP92A6NM28 416 aa18.37■□□□□ 0.53
SPSB3-208ENST00000566339 MRPL33O75394 65 aaKnown RBP18.37■□□□□ 0.53
SPSB3-208ENST00000566339 GFRA1P56159 465 aa18.37■□□□□ 0.53
SPSB3-208ENST00000566339 JOSD1Q15040 202 aaPredicted RBP18.37■□□□□ 0.53
SPSB3-208ENST00000566339 ZNF726P1Q15940 193 aa18.37■□□□□ 0.53
SPSB3-208ENST00000566339 ACY3Q96HD9 319 aa18.37■□□□□ 0.53
SPSB3-208ENST00000566339 C14orf144Q96I85 54 aa18.37■□□□□ 0.53
SPSB3-208ENST00000566339 PACRGQ96M98 296 aaPredicted RBP18.37■□□□□ 0.53
SPSB3-208ENST00000566339 SPTBN4Q9H254 2564 aa18.37■□□□□ 0.53
SPSB3-208ENST00000566339 CCDC163A0A0D9SF12 145 aa18.36■□□□□ 0.53
SPSB3-208ENST00000566339 MAP1LC3B2A6NCE7 125 aa18.36■□□□□ 0.53
SPSB3-208ENST00000566339 PSG2P11465 335 aa18.36■□□□□ 0.53
SPSB3-208ENST00000566339 HOXA6P31267 233 aa18.36■□□□□ 0.53
SPSB3-208ENST00000566339 TMEM267Q0VDI3 215 aaPredicted RBP18.36■□□□□ 0.53
SPSB3-208ENST00000566339 LPAL2Q16609 132 aa18.36■□□□□ 0.53
SPSB3-208ENST00000566339 OR5P3Q8WZ94 311 aa18.36■□□□□ 0.53
SPSB3-208ENST00000566339 S100PBPQ96BU1 408 aa18.36■□□□□ 0.53
SPSB3-208ENST00000566339 BTF3L4Q96K17 158 aa18.36■□□□□ 0.53
SPSB3-208ENST00000566339 ACTR3CQ9C0K3 210 aaPredicted RBP18.36■□□□□ 0.53
SPSB3-208ENST00000566339 MAP1LC3BQ9GZQ8 125 aa18.36■□□□□ 0.53
SPSB3-208ENST00000566339 CACNG5Q9UF02 275 aa18.36■□□□□ 0.53
SPSB3-208ENST00000566339 KBTBD11O94819 623 aa18.35■□□□□ 0.53
SPSB3-208ENST00000566339 PFN1P07737 140 aaKnown RBP18.35■□□□□ 0.53
SPSB3-208ENST00000566339 DDTP30046 118 aa18.35■□□□□ 0.53
SPSB3-208ENST00000566339 CEACAM6P40199 344 aa18.35■□□□□ 0.53
SPSB3-208ENST00000566339 GNG3P63215 75 aa18.35■□□□□ 0.53
SPSB3-208ENST00000566339 ARF1P84077 181 aaKnown RBP18.35■□□□□ 0.53
SPSB3-208ENST00000566339 TMEM241Q24JQ0 296 aa18.35■□□□□ 0.53
SPSB3-208ENST00000566339 ZNF468Q5VIY5 522 aaPredicted RBP18.35■□□□□ 0.53
SPSB3-208ENST00000566339 PMS2CLQ68D20 193 aa18.35■□□□□ 0.53
SPSB3-208ENST00000566339 NCR3LG1Q68D85 454 aa18.35■□□□□ 0.53
SPSB3-208ENST00000566339 LILRB2Q8N423 598 aa18.35■□□□□ 0.53
SPSB3-208ENST00000566339 ZBTB34Q8NCN2 500 aa18.35■□□□□ 0.53
SPSB3-208ENST00000566339 IFI44Q8TCB0 444 aa18.35■□□□□ 0.53
SPSB3-208ENST00000566339 ANAPC16Q96DE5 110 aa18.35■□□□□ 0.53
SPSB3-208ENST00000566339 HIST1H2BLQ99880 126 aa18.35■□□□□ 0.53
SPSB3-208ENST00000566339 RSG1Q9BU20 258 aa18.35■□□□□ 0.53
SPSB3-208ENST00000566339 MANBALQ9NQG1 85 aa18.35■□□□□ 0.53
SPSB3-208ENST00000566339 ERRFI1Q9UJM3 462 aaPredicted RBP18.35■□□□□ 0.53
SPSB3-208ENST00000566339 PILRBQ9UKJ0 227 aa18.35■□□□□ 0.53
SPSB3-208ENST00000566339 NTN3O00634 580 aaPredicted RBP18.35■□□□□ 0.53
SPSB3-208ENST00000566339 FABP4P15090 132 aa18.35■□□□□ 0.53
SPSB3-208ENST00000566339 FGF7P21781 194 aa18.35■□□□□ 0.53
SPSB3-208ENST00000566339 LCN15Q6UWW0 184 aa18.35■□□□□ 0.53
SPSB3-208ENST00000566339 FAM58AQ8N1B3 248 aa18.35■□□□□ 0.53
SPSB3-208ENST00000566339 TAF15Q92804 592 aaKnown RBP eCLIP18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms