RNA–Protein interactions for RNA: ENST00000565545.1

CSPG4P13-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

TSL 5

Gene CSPG4P13, Length 657 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-201ENST00000565545 NLRC3Q7RTR2 1065 aa15.8■□□□□ 0.12
CSPG4P13-201ENST00000565545 H1FOOQ8IZA3 346 aaPredicted RBP15.8■□□□□ 0.12
CSPG4P13-201ENST00000565545 CADM3Q8N126 398 aa15.8■□□□□ 0.12
CSPG4P13-201ENST00000565545 CHAC2Q8WUX2 184 aa15.8■□□□□ 0.12
CSPG4P13-201ENST00000565545 ARL11Q969Q4 196 aa15.8■□□□□ 0.12
CSPG4P13-201ENST00000565545 PERPQ96FX8 193 aa15.8■□□□□ 0.12
CSPG4P13-201ENST00000565545 UBE2J1Q9Y385 318 aaPredicted RBP15.8■□□□□ 0.12
CSPG4P13-201ENST00000565545 ALG5Q9Y673 324 aa15.8■□□□□ 0.12
CSPG4P13-201ENST00000565545 A0A0B4J293 547 aa15.79■□□□□ 0.12
CSPG4P13-201ENST00000565545 ZNF729A6NN14 1252 aaPredicted RBP15.79■□□□□ 0.12
CSPG4P13-201ENST00000565545 SNRPGP15A8MWD9 76 aa15.79■□□□□ 0.12
CSPG4P13-201ENST00000565545 C15orf65H3BRN8 121 aa15.79■□□□□ 0.12
CSPG4P13-201ENST00000565545 HSPA12AO43301 675 aa15.79■□□□□ 0.12
CSPG4P13-201ENST00000565545 PPYP01298 95 aa15.79■□□□□ 0.12
CSPG4P13-201ENST00000565545 CTSDP07339 412 aaPredicted RBP15.79■□□□□ 0.12
CSPG4P13-201ENST00000565545 ZNF728P0DKX0 622 aa15.79■□□□□ 0.12
CSPG4P13-201ENST00000565545 PAX1P15863 534 aa15.79■□□□□ 0.12
CSPG4P13-201ENST00000565545 ANXA7P20073 488 aaKnown RBP15.79■□□□□ 0.12
CSPG4P13-201ENST00000565545 AADACP22760 399 aa15.79■□□□□ 0.12
CSPG4P13-201ENST00000565545 NFYAP23511 347 aaPredicted RBP15.79■□□□□ 0.12
CSPG4P13-201ENST00000565545 AVPI1Q5T686 147 aa15.79■□□□□ 0.12
CSPG4P13-201ENST00000565545 PRSS57Q6UWY2 283 aa15.79■□□□□ 0.12
CSPG4P13-201ENST00000565545 SLC25A42Q86VD7 318 aa15.79■□□□□ 0.12
CSPG4P13-201ENST00000565545 IL1F10Q8WWZ1 152 aa15.79■□□□□ 0.12
CSPG4P13-201ENST00000565545 NEIL1Q96FI4 390 aaPredicted RBP15.79■□□□□ 0.12
CSPG4P13-201ENST00000565545 LINC00574Q9H8X3 128 aa15.79■□□□□ 0.12
CSPG4P13-201ENST00000565545 TAS2R3Q9NYW6 316 aa15.79■□□□□ 0.12
CSPG4P13-201ENST00000565545 CTSZQ9UBR2 303 aa15.79■□□□□ 0.12
CSPG4P13-201ENST00000565545 ZNF69Q9UC07 566 aa15.79■□□□□ 0.12
CSPG4P13-201ENST00000565545 C14orf166Q9Y224 244 aaKnown RBP15.79■□□□□ 0.12
CSPG4P13-201ENST00000565545 OR2W1Q9Y3N9 320 aa15.79■□□□□ 0.12
CSPG4P13-201ENST00000565545 LINC00312Q9Y6C7 94 aa15.79■□□□□ 0.12
CSPG4P13-201ENST00000565545 FBN3Q75N90 2809 aa15.78■□□□□ 0.12
CSPG4P13-201ENST00000565545 TRBV23-1A0A0A0MS06 115 aa15.78■□□□□ 0.12
CSPG4P13-201ENST00000565545 F2RL2O00254 374 aa15.78■□□□□ 0.12
CSPG4P13-201ENST00000565545 NDUFS7O75251 213 aa15.78■□□□□ 0.12
CSPG4P13-201ENST00000565545 PGAM2P15259 253 aa15.78■□□□□ 0.12
CSPG4P13-201ENST00000565545 RPS2P15880 293 aaKnown RBP15.78■□□□□ 0.12
CSPG4P13-201ENST00000565545 C11orf91Q3C1V1 193 aa15.78■□□□□ 0.12
CSPG4P13-201ENST00000565545 TMED4Q7Z7H5 227 aa15.78■□□□□ 0.12
CSPG4P13-201ENST00000565545 SLC38A6Q8IZM9 456 aa15.78■□□□□ 0.12
CSPG4P13-201ENST00000565545 PRR18Q8N4B5 295 aa15.78■□□□□ 0.12
CSPG4P13-201ENST00000565545 OR8B3Q8NGG8 313 aa15.78■□□□□ 0.12
CSPG4P13-201ENST00000565545 OR1L1Q8NH94 360 aa15.78■□□□□ 0.12
CSPG4P13-201ENST00000565545 FAM216AQ8WUB2 273 aa15.78■□□□□ 0.12
CSPG4P13-201ENST00000565545 ZNF486Q96H40 463 aaPredicted RBP15.78■□□□□ 0.12
CSPG4P13-201ENST00000565545 OR8B2Q96RD0 313 aa15.78■□□□□ 0.12
CSPG4P13-201ENST00000565545 TMPRSS13Q9BYE2 586 aa15.78■□□□□ 0.12
CSPG4P13-201ENST00000565545 FXYD6Q9H0Q3 95 aa15.78■□□□□ 0.12
CSPG4P13-201ENST00000565545 GHITMQ9H3K2 345 aa15.78■□□□□ 0.12
CSPG4P13-201ENST00000565545 ARID1AO14497 2285 aa15.77■□□□□ 0.12
CSPG4P13-201ENST00000565545 A0A0A6YYJ9 748 aa15.77■□□□□ 0.12
CSPG4P13-201ENST00000565545 KBTBD11-OT1A0A1B0GTJ5 212 aa15.77■□□□□ 0.12
CSPG4P13-201ENST00000565545 IGHV4-39P01824 125 aa15.77■□□□□ 0.12
CSPG4P13-201ENST00000565545 WNT2P09544 360 aa15.77■□□□□ 0.12
CSPG4P13-201ENST00000565545 TRAPPC2P0DI81 140 aa15.77■□□□□ 0.12
CSPG4P13-201ENST00000565545 TRAPPC2BP0DI82 140 aa15.77■□□□□ 0.12
CSPG4P13-201ENST00000565545 PDLIM4P50479 330 aa15.77■□□□□ 0.12
CSPG4P13-201ENST00000565545 RPL31P62899 125 aaKnown RBP15.77■□□□□ 0.12
CSPG4P13-201ENST00000565545 C5orf24Q7Z6I8 188 aa15.77■□□□□ 0.12
CSPG4P13-201ENST00000565545 OR10A7Q8NGE5 316 aa15.77■□□□□ 0.12
CSPG4P13-201ENST00000565545 DCTN5Q9BTE1 182 aa15.77■□□□□ 0.12
CSPG4P13-201ENST00000565545 C5orf66Q9H5L9 145 aa15.77■□□□□ 0.12
CSPG4P13-201ENST00000565545 CALYQ9NYX4 217 aa15.77■□□□□ 0.12
CSPG4P13-201ENST00000565545 CLN8Q9UBY8 286 aa15.77■□□□□ 0.12
CSPG4P13-201ENST00000565545 HIVEP2P31629 2446 aa15.76■□□□□ 0.11
CSPG4P13-201ENST00000565545 HMX3A6NHT5 357 aa15.76■□□□□ 0.11
CSPG4P13-201ENST00000565545 INAFM1C9JVW0 142 aa15.76■□□□□ 0.11
CSPG4P13-201ENST00000565545 OR4E1P0C645 316 aa15.76■□□□□ 0.11
CSPG4P13-201ENST00000565545 VSIG10L2P0DP72 767 aa15.76■□□□□ 0.11
CSPG4P13-201ENST00000565545 SSTR5P35346 364 aa15.76■□□□□ 0.11
CSPG4P13-201ENST00000565545 CEACAM6P40199 344 aa15.76■□□□□ 0.11
CSPG4P13-201ENST00000565545 DHODHQ02127 395 aa15.76■□□□□ 0.11
CSPG4P13-201ENST00000565545 CARTPTQ16568 116 aa15.76■□□□□ 0.11
CSPG4P13-201ENST00000565545 TMEM128Q5BJH2 165 aa15.76■□□□□ 0.11
CSPG4P13-201ENST00000565545 C11orf88Q6PI97 169 aa15.76■□□□□ 0.11
CSPG4P13-201ENST00000565545 ZNF841Q6ZN19 808 aa15.76■□□□□ 0.11
CSPG4P13-201ENST00000565545 DACT3Q96B18 629 aaPredicted RBP15.76■□□□□ 0.11
CSPG4P13-201ENST00000565545 RTBDNQ9BSG5 229 aaPredicted RBP15.76■□□□□ 0.11
CSPG4P13-201ENST00000565545 RSRP1Q9BUV0 290 aa15.76■□□□□ 0.11
CSPG4P13-201ENST00000565545 BEX2Q9BXY8 128 aa15.76■□□□□ 0.11
CSPG4P13-201ENST00000565545 OR51J1Q9H342 316 aa15.76■□□□□ 0.11
CSPG4P13-201ENST00000565545 GAL3ST2Q9H3Q3 398 aa15.76■□□□□ 0.11
CSPG4P13-201ENST00000565545 PATZ1Q9HBE1 687 aaKnown RBP15.76■□□□□ 0.11
CSPG4P13-201ENST00000565545 BEX1Q9HBH7 125 aa15.76■□□□□ 0.11
CSPG4P13-201ENST00000565545 OR1A1Q9P1Q5 309 aa15.76■□□□□ 0.11
CSPG4P13-201ENST00000565545 JPT1Q9UK76 154 aa15.76■□□□□ 0.11
CSPG4P13-201ENST00000565545 USF3Q68DE3 2245 aa15.76■□□□□ 0.11
CSPG4P13-201ENST00000565545 CSPG4Q6UVK1 2322 aa15.76■□□□□ 0.11
CSPG4P13-201ENST00000565545 F5H0A9 414 aaPredicted RBP15.75■□□□□ 0.11
CSPG4P13-201ENST00000565545 NDUFS8O00217 210 aa15.75■□□□□ 0.11
CSPG4P13-201ENST00000565545 CREBL2O60519 120 aaPredicted RBP15.75■□□□□ 0.11
CSPG4P13-201ENST00000565545 FCN3O75636 299 aa15.75■□□□□ 0.11
CSPG4P13-201ENST00000565545 RGS11O94810 467 aa15.75■□□□□ 0.11
CSPG4P13-201ENST00000565545 LUMP51884 338 aaPredicted RBP15.75■□□□□ 0.11
CSPG4P13-201ENST00000565545 FXYD4P59646 89 aa15.75■□□□□ 0.11
CSPG4P13-201ENST00000565545 C17orf58Q2M2W7 97 aa15.75■□□□□ 0.11
CSPG4P13-201ENST00000565545 C4orf46Q504U0 113 aa15.75■□□□□ 0.11
CSPG4P13-201ENST00000565545 LY6G6FQ5SQ64 297 aa15.75■□□□□ 0.11
CSPG4P13-201ENST00000565545 ZNF626Q68DY1 528 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms