RNA–Protein interactions for RNA: ENST00000565511.5

RAB40C-209, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-209ENST00000565511 WNT4P56705 351 aa18.62■□□□□ 0.57
RAB40C-209ENST00000565511 SLC35B1P78383 322 aa18.62■□□□□ 0.57
RAB40C-209ENST00000565511 C6orf183Q5T699 404 aa18.62■□□□□ 0.57
RAB40C-209ENST00000565511 ZNF695Q8IW36 515 aa18.62■□□□□ 0.57
RAB40C-209ENST00000565511 C8orf59Q8N0T1 100 aaPredicted RBP18.62■□□□□ 0.57
RAB40C-209ENST00000565511 OR52L2PQ8NGH6 319 aa18.62■□□□□ 0.57
RAB40C-209ENST00000565511 MRPS24Q96EL2 167 aaKnown RBP18.62■□□□□ 0.57
RAB40C-209ENST00000565511 TAF9BQ9HBM6 251 aa18.62■□□□□ 0.57
RAB40C-209ENST00000565511 CD1AP06126 327 aa18.61■□□□□ 0.57
RAB40C-209ENST00000565511 C6orf141Q5SZD1 244 aa18.61■□□□□ 0.57
RAB40C-209ENST00000565511 OGFRL1Q5TC84 451 aaPredicted RBP18.61■□□□□ 0.57
RAB40C-209ENST00000565511 OR10K2Q6IF99 312 aa18.61■□□□□ 0.57
RAB40C-209ENST00000565511 CDH26Q8IXH8 852 aa18.61■□□□□ 0.57
RAB40C-209ENST00000565511 ODF3L1Q8IXM7 274 aa18.61■□□□□ 0.57
RAB40C-209ENST00000565511 COMMD1Q8N668 190 aa18.61■□□□□ 0.57
RAB40C-209ENST00000565511 NANOGP1Q8N7R0 232 aa18.61■□□□□ 0.57
RAB40C-209ENST00000565511 BPIFB6Q8NFQ5 453 aa18.61■□□□□ 0.57
RAB40C-209ENST00000565511 PLCXD1Q9NUJ7 323 aa18.61■□□□□ 0.57
RAB40C-209ENST00000565511 MBNL3Q9NUK0 354 aaKnown RBP18.61■□□□□ 0.57
RAB40C-209ENST00000565511 FAM90A10PA6NDY2 464 aa18.6■□□□□ 0.57
RAB40C-209ENST00000565511 FAM90A7PA6NKC0 464 aa18.6■□□□□ 0.57
RAB40C-209ENST00000565511 FAM90A23PA8MXZ1 464 aa18.6■□□□□ 0.57
RAB40C-209ENST00000565511 H0YHG0 523 aa18.6■□□□□ 0.57
RAB40C-209ENST00000565511 MYL12BO14950 172 aa18.6■□□□□ 0.57
RAB40C-209ENST00000565511 FUT3P21217 361 aa18.6■□□□□ 0.57
RAB40C-209ENST00000565511 PPP1CCP36873 323 aaKnown RBP18.6■□□□□ 0.57
RAB40C-209ENST00000565511 LSAMPQ13449 338 aa18.6■□□□□ 0.57
RAB40C-209ENST00000565511 DEFB121Q5J5C9 76 aa18.6■□□□□ 0.57
RAB40C-209ENST00000565511 RITA1Q96K30 269 aa18.6■□□□□ 0.57
RAB40C-209ENST00000565511 C8orf4Q9NR00 106 aa18.6■□□□□ 0.57
RAB40C-209ENST00000565511 PDCD6O75340 191 aa18.59■□□□□ 0.57
RAB40C-209ENST00000565511 GPR50Q13585 617 aa18.59■□□□□ 0.57
RAB40C-209ENST00000565511 PNLIPRP3Q17RR3 467 aa18.59■□□□□ 0.57
RAB40C-209ENST00000565511 MORN2Q502X0 79 aa18.59■□□□□ 0.57
RAB40C-209ENST00000565511 TEX38Q6PEX7 206 aa18.59■□□□□ 0.57
RAB40C-209ENST00000565511 LRRTM1Q86UE6 522 aa18.59■□□□□ 0.57
RAB40C-209ENST00000565511 RNF152Q8N8N0 203 aa18.59■□□□□ 0.57
RAB40C-209ENST00000565511 SULT4A1Q9BR01 284 aa18.59■□□□□ 0.57
RAB40C-209ENST00000565511 MRPL20Q9BYC9 149 aaKnown RBP18.59■□□□□ 0.57
RAB40C-209ENST00000565511 DCLRE1BQ9H816 532 aa18.59■□□□□ 0.57
RAB40C-209ENST00000565511 CCL24O00175 119 aa18.58■□□□□ 0.56
RAB40C-209ENST00000565511 CASQ2O14958 399 aaPredicted RBP18.58■□□□□ 0.56
RAB40C-209ENST00000565511 LANCL1O43813 399 aa18.58■□□□□ 0.56
RAB40C-209ENST00000565511 SLC2A2P11168 524 aaPredicted RBP18.58■□□□□ 0.56
RAB40C-209ENST00000565511 MYF6P23409 242 aa18.58■□□□□ 0.56
RAB40C-209ENST00000565511 CNTFRP26992 372 aa18.58■□□□□ 0.56
RAB40C-209ENST00000565511 TMEM30BQ3MIR4 351 aa18.58■□□□□ 0.56
RAB40C-209ENST00000565511 NKAPLQ5M9Q1 402 aa18.58■□□□□ 0.56
RAB40C-209ENST00000565511 UNQ9370/PRO34162Q6UXP9 181 aa18.58■□□□□ 0.56
RAB40C-209ENST00000565511 NKAIN3Q8N8D7 197 aa18.58■□□□□ 0.56
RAB40C-209ENST00000565511 RASL11BQ9BPW5 248 aa18.58■□□□□ 0.56
RAB40C-209ENST00000565511 UQCC2Q9BRT2 126 aa18.58■□□□□ 0.56
RAB40C-209ENST00000565511 OR2S2Q9NQN1 319 aa18.58■□□□□ 0.56
RAB40C-209ENST00000565511 TXNL1O43396 289 aa18.57■□□□□ 0.56
RAB40C-209ENST00000565511 CHATP28329 748 aa18.57■□□□□ 0.56
RAB40C-209ENST00000565511 SLC6A1P30531 599 aa18.57■□□□□ 0.56
RAB40C-209ENST00000565511 LUMP51884 338 aaPredicted RBP18.57■□□□□ 0.56
RAB40C-209ENST00000565511 FOXE3Q13461 319 aa18.57■□□□□ 0.56
RAB40C-209ENST00000565511 TRAT1Q6PIZ9 186 aa18.57■□□□□ 0.56
RAB40C-209ENST00000565511 ABHD14AQ9BUJ0 271 aa18.57■□□□□ 0.56
RAB40C-209ENST00000565511 LSM2Q9Y333 95 aaKnown RBP18.57■□□□□ 0.56
RAB40C-209ENST00000565511 NBEAL2Q6ZNJ1 2754 aa18.57■□□□□ 0.56
RAB40C-209ENST00000565511 CA11O75493 328 aa18.56■□□□□ 0.56
RAB40C-209ENST00000565511 GLAP06280 429 aa18.56■□□□□ 0.56
RAB40C-209ENST00000565511 VSIG8P0DPA2 414 aa18.56■□□□□ 0.56
RAB40C-209ENST00000565511 OR3A3P47888 321 aa18.56■□□□□ 0.56
RAB40C-209ENST00000565511 RAB25P57735 213 aa18.56■□□□□ 0.56
RAB40C-209ENST00000565511 UNC119Q13432 240 aa18.56■□□□□ 0.56
RAB40C-209ENST00000565511 ACSM3Q53FZ2 586 aa18.56■□□□□ 0.56
RAB40C-209ENST00000565511 NABP2Q9BQ15 211 aa18.56■□□□□ 0.56
RAB40C-209ENST00000565511 NICN1Q9BSH3 213 aa18.56■□□□□ 0.56
RAB40C-209ENST00000565511 ANKRD65E5RJM6 399 aa18.55■□□□□ 0.56
RAB40C-209ENST00000565511 IGHG4P01861 327 aa18.55■□□□□ 0.56
RAB40C-209ENST00000565511 CDK1P06493 297 aa18.55■□□□□ 0.56
RAB40C-209ENST00000565511 SOX6P35712 828 aa18.55■□□□□ 0.56
RAB40C-209ENST00000565511 GABPB1Q06547 395 aaPredicted RBP18.55■□□□□ 0.56
RAB40C-209ENST00000565511 CXorf66Q5JRM2 361 aaPredicted RBP18.55■□□□□ 0.56
RAB40C-209ENST00000565511 C6orf201Q7Z4U5 140 aa18.55■□□□□ 0.56
RAB40C-209ENST00000565511 OR8H1Q8NGG4 311 aa18.55■□□□□ 0.56
RAB40C-209ENST00000565511 DPF1Q92782 380 aa18.55■□□□□ 0.56
RAB40C-209ENST00000565511 KCTD7Q96MP8 289 aa18.55■□□□□ 0.56
RAB40C-209ENST00000565511 FAAP24Q9BTP7 215 aa18.55■□□□□ 0.56
RAB40C-209ENST00000565511 TMED9Q9BVK6 235 aa18.55■□□□□ 0.56
RAB40C-209ENST00000565511 GPR61Q9BZJ8 451 aa18.55■□□□□ 0.56
RAB40C-209ENST00000565511 PARP12Q9H0J9 701 aaKnown RBP18.55■□□□□ 0.56
RAB40C-209ENST00000565511 JPT1Q9UK76 154 aa18.55■□□□□ 0.56
RAB40C-209ENST00000565511 A0A0A6YYD4 124 aa18.54■□□□□ 0.56
RAB40C-209ENST00000565511 ELANEP08246 267 aa18.54■□□□□ 0.56
RAB40C-209ENST00000565511 MAPK3P27361 379 aaPredicted RBP18.54■□□□□ 0.56
RAB40C-209ENST00000565511 MMDQ15546 238 aa18.54■□□□□ 0.56
RAB40C-209ENST00000565511 HMGN3Q15651 99 aa18.54■□□□□ 0.56
RAB40C-209ENST00000565511 VAX1Q5SQQ9 334 aa18.54■□□□□ 0.56
RAB40C-209ENST00000565511 C1orf100Q5SVJ3 147 aa18.54■□□□□ 0.56
RAB40C-209ENST00000565511 MCRIP2Q9BUT9 160 aaKnown RBP18.54■□□□□ 0.56
RAB40C-209ENST00000565511 IFI27L2Q9H2X8 130 aa18.54■□□□□ 0.56
RAB40C-209ENST00000565511 RAB9BQ9NP90 201 aa18.54■□□□□ 0.56
RAB40C-209ENST00000565511 ZNF107Q9UII5 783 aaPredicted RBP18.54■□□□□ 0.56
RAB40C-209ENST00000565511 SAA2-SAA4A0A096LPE2 208 aa18.53■□□□□ 0.56
RAB40C-209ENST00000565511 IGF1P05019 195 aa18.53■□□□□ 0.56
RAB40C-209ENST00000565511 SAA2P0DJI9 122 aaPredicted RBP18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms