RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 MRPS24Q96EL2 167 aaKnown RBP6.7□□□□□ -1.34
CAPN3-213ENST00000565173 RITA1Q96K30 269 aa6.7□□□□□ -1.34
CAPN3-213ENST00000565173 PGLYRP3Q96LB9 341 aa6.7□□□□□ -1.34
CAPN3-213ENST00000565173 ZMAT5Q9UDW3 170 aaKnown RBP6.7□□□□□ -1.34
CAPN3-213ENST00000565173 ZNF580Q9UK33 172 aa6.7□□□□□ -1.34
CAPN3-213ENST00000565173 DIMT1Q9UNQ2 313 aaKnown RBP6.7□□□□□ -1.34
CAPN3-213ENST00000565173 TRBV5-7A0A0A0MS05 114 aa6.69□□□□□ -1.34
CAPN3-213ENST00000565173 A0A1W2PPK0 400 aa6.69□□□□□ -1.34
CAPN3-213ENST00000565173 MCRIP1C9JLW8 97 aa6.69□□□□□ -1.34
CAPN3-213ENST00000565173 TXNL1O43396 289 aa6.69□□□□□ -1.34
CAPN3-213ENST00000565173 GNAO1P09471 354 aa6.69□□□□□ -1.34
CAPN3-213ENST00000565173 RCC1P18754 421 aaPredicted RBP6.69□□□□□ -1.34
CAPN3-213ENST00000565173 IL3RAP26951 378 aa6.69□□□□□ -1.34
CAPN3-213ENST00000565173 PPIFP30405 207 aaKnown RBP6.69□□□□□ -1.34
CAPN3-213ENST00000565173 SOX6P35712 828 aa6.69□□□□□ -1.34
CAPN3-213ENST00000565173 RAB25P57735 213 aa6.69□□□□□ -1.34
CAPN3-213ENST00000565173 DCTN2Q13561 401 aaKnown RBP6.69□□□□□ -1.34
CAPN3-213ENST00000565173 GPR176Q14439 515 aa6.69□□□□□ -1.34
CAPN3-213ENST00000565173 C9orf66Q5T8R8 295 aa6.69□□□□□ -1.34
CAPN3-213ENST00000565173 ASPHD1Q5U4P2 390 aa6.69□□□□□ -1.34
CAPN3-213ENST00000565173 SIGIRRQ6IA17 410 aa6.69□□□□□ -1.34
CAPN3-213ENST00000565173 RAB12Q6IQ22 244 aa6.69□□□□□ -1.34
CAPN3-213ENST00000565173 GLIPR1L1Q6UWM5 242 aa6.69□□□□□ -1.34
CAPN3-213ENST00000565173 C5orf24Q7Z6I8 188 aa6.69□□□□□ -1.34
CAPN3-213ENST00000565173 ODF3L1Q8IXM7 274 aa6.69□□□□□ -1.34
CAPN3-213ENST00000565173 OR10V1Q8NGI7 309 aa6.69□□□□□ -1.34
CAPN3-213ENST00000565173 OR5M8Q8NGP6 311 aa6.69□□□□□ -1.34
CAPN3-213ENST00000565173 OR4K15Q8NH41 348 aa6.69□□□□□ -1.34
CAPN3-213ENST00000565173 NEK7Q8TDX7 302 aa6.69□□□□□ -1.34
CAPN3-213ENST00000565173 C4orf3Q8WVX3 66 aa6.69□□□□□ -1.34
CAPN3-213ENST00000565173 MUL1Q969V5 352 aa6.69□□□□□ -1.34
CAPN3-213ENST00000565173 KCTD7Q96MP8 289 aa6.69□□□□□ -1.34
CAPN3-213ENST00000565173 PRR25Q96S07 402 aa6.69□□□□□ -1.34
CAPN3-213ENST00000565173 S100A13Q99584 98 aa6.69□□□□□ -1.34
CAPN3-213ENST00000565173 RASL11BQ9BPW5 248 aa6.69□□□□□ -1.34
CAPN3-213ENST00000565173 KLK15Q9H2R5 256 aa6.69□□□□□ -1.34
CAPN3-213ENST00000565173 SPACA1Q9HBV2 294 aa6.69□□□□□ -1.34
CAPN3-213ENST00000565173 MBNL3Q9NUK0 354 aaKnown RBP6.69□□□□□ -1.34
CAPN3-213ENST00000565173 ETAA1Q9NY74 926 aa6.69□□□□□ -1.34
CAPN3-213ENST00000565173 GNG12Q9UBI6 72 aa6.69□□□□□ -1.34
CAPN3-213ENST00000565173 TRAPPC2LQ9UL33 140 aa6.69□□□□□ -1.34
CAPN3-213ENST00000565173 MRPS28Q9Y2Q9 187 aaKnown RBP6.69□□□□□ -1.34
CAPN3-213ENST00000565173 DNAH1Q9P2D7 4330 aa6.68□□□□□ -1.34
CAPN3-213ENST00000565173 FAM90A10PA6NDY2 464 aa6.68□□□□□ -1.34
CAPN3-213ENST00000565173 SEC14L6B5MCN3 397 aa6.68□□□□□ -1.34
CAPN3-213ENST00000565173 I3L521 148 aa6.68□□□□□ -1.34
CAPN3-213ENST00000565173 SPINT2O43291 252 aa6.68□□□□□ -1.34
CAPN3-213ENST00000565173 LANCL1O43813 399 aa6.68□□□□□ -1.34
CAPN3-213ENST00000565173 IGLV1-40P01703 118 aa6.68□□□□□ -1.34
CAPN3-213ENST00000565173 FSTP19883 344 aa6.68□□□□□ -1.34
CAPN3-213ENST00000565173 VDAC1P21796 283 aa6.68□□□□□ -1.34
CAPN3-213ENST00000565173 CNTFRP26992 372 aa6.68□□□□□ -1.34
CAPN3-213ENST00000565173 HSPA13P48723 471 aa6.68□□□□□ -1.34
CAPN3-213ENST00000565173 LSAMPQ13449 338 aa6.68□□□□□ -1.34
CAPN3-213ENST00000565173 DOC2BQ14184 412 aa6.68□□□□□ -1.34
CAPN3-213ENST00000565173 GNMTQ14749 295 aa6.68□□□□□ -1.34
CAPN3-213ENST00000565173 TMEM30BQ3MIR4 351 aa6.68□□□□□ -1.34
CAPN3-213ENST00000565173 Q499Y3 187 aa6.68□□□□□ -1.34
CAPN3-213ENST00000565173 MORN2Q502X0 79 aa6.68□□□□□ -1.34
CAPN3-213ENST00000565173 YIF1BQ5BJH7 314 aa6.68□□□□□ -1.34
CAPN3-213ENST00000565173 C6orf183Q5T699 404 aa6.68□□□□□ -1.34
CAPN3-213ENST00000565173 CDH26Q8IXH8 852 aa6.68□□□□□ -1.34
CAPN3-213ENST00000565173 PRR18Q8N4B5 295 aa6.68□□□□□ -1.34
CAPN3-213ENST00000565173 STX19Q8N4C7 294 aa6.68□□□□□ -1.34
CAPN3-213ENST00000565173 ZFP41Q8N8Y5 198 aa6.68□□□□□ -1.34
CAPN3-213ENST00000565173 OR11H1Q8NG94 326 aa6.68□□□□□ -1.34
CAPN3-213ENST00000565173 GGHQ92820 318 aa6.68□□□□□ -1.34
CAPN3-213ENST00000565173 TMEM80Q96HE8 168 aa6.68□□□□□ -1.34
CAPN3-213ENST00000565173 CHCHD6Q9BRQ6 235 aa6.68□□□□□ -1.34
CAPN3-213ENST00000565173 BANF2Q9H503 90 aa6.68□□□□□ -1.34
CAPN3-213ENST00000565173 GNB4Q9HAV0 340 aa6.68□□□□□ -1.34
CAPN3-213ENST00000565173 TAF9BQ9HBM6 251 aa6.68□□□□□ -1.34
CAPN3-213ENST00000565173 ZNF107Q9UII5 783 aaPredicted RBP6.68□□□□□ -1.34
CAPN3-213ENST00000565173 EXOSC1Q9Y3B2 195 aaKnown RBP6.68□□□□□ -1.34
CAPN3-213ENST00000565173 PEX16Q9Y5Y5 336 aa6.68□□□□□ -1.34
CAPN3-213ENST00000565173 U3KQK5 164 aa6.68□□□□□ -1.34
CAPN3-213ENST00000565173 CSMD3Q7Z407 3707 aa6.67□□□□□ -1.34
CAPN3-213ENST00000565173 FAM90A7PA6NKC0 464 aa6.67□□□□□ -1.34
CAPN3-213ENST00000565173 FAM90A23PA8MXZ1 464 aa6.67□□□□□ -1.34
CAPN3-213ENST00000565173 G3V318 75 aa6.67□□□□□ -1.34
CAPN3-213ENST00000565173 CA11O75493 328 aa6.67□□□□□ -1.34
CAPN3-213ENST00000565173 MAS1P04201 325 aa6.67□□□□□ -1.34
CAPN3-213ENST00000565173 GLAP06280 429 aa6.67□□□□□ -1.34
CAPN3-213ENST00000565173 SLC2A2P11168 524 aaPredicted RBP6.67□□□□□ -1.34
CAPN3-213ENST00000565173 FUT3P21217 361 aa6.67□□□□□ -1.34
CAPN3-213ENST00000565173 ECI1P42126 302 aa6.67□□□□□ -1.34
CAPN3-213ENST00000565173 RUNX1Q01196 453 aa6.67□□□□□ -1.34
CAPN3-213ENST00000565173 LY6G6FQ5SQ64 297 aa6.67□□□□□ -1.34
CAPN3-213ENST00000565173 C6orf141Q5SZD1 244 aa6.67□□□□□ -1.34
CAPN3-213ENST00000565173 AWAT2Q6E213 333 aa6.67□□□□□ -1.34
CAPN3-213ENST00000565173 LAIR2Q6ISS4 152 aa6.67□□□□□ -1.34
CAPN3-213ENST00000565173 ZNF554Q86TJ5 538 aa6.67□□□□□ -1.34
CAPN3-213ENST00000565173 ZNF491Q8N8L2 437 aa6.67□□□□□ -1.34
CAPN3-213ENST00000565173 BPIFB6Q8NFQ5 453 aa6.67□□□□□ -1.34
CAPN3-213ENST00000565173 OR52L2PQ8NGH6 319 aa6.67□□□□□ -1.34
CAPN3-213ENST00000565173 MRPL30Q8TCC3 161 aaKnown RBP6.67□□□□□ -1.34
CAPN3-213ENST00000565173 UBE2E2Q96LR5 201 aa6.67□□□□□ -1.34
CAPN3-213ENST00000565173 Q96M66 194 aa6.67□□□□□ -1.34
CAPN3-213ENST00000565173 DERL3Q96Q80 235 aa6.67□□□□□ -1.34
CAPN3-213ENST00000565173 OR14A2Q96R54 314 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms