RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 ZNF737O75373 536 aa13.95□□□□□ -0.18
LINC00554-201ENST00000564841 PPYP01298 95 aa13.95□□□□□ -0.18
LINC00554-201ENST00000564841 IAPPP10997 89 aa13.95□□□□□ -0.18
LINC00554-201ENST00000564841 OR10J1P30954 320 aa13.95□□□□□ -0.18
LINC00554-201ENST00000564841 ZNF295-AS1Q8N0V1 137 aa13.95□□□□□ -0.18
LINC00554-201ENST00000564841 RBM24Q9BX46 236 aaKnown RBP13.95□□□□□ -0.18
LINC00554-201ENST00000564841 CDS2O95674 445 aa13.94□□□□□ -0.18
LINC00554-201ENST00000564841 IL6RP08887 468 aaPredicted RBP13.94□□□□□ -0.18
LINC00554-201ENST00000564841 ZNF41P51814 821 aaPredicted RBP13.94□□□□□ -0.18
LINC00554-201ENST00000564841 ZNF818PQ6ZRF7 136 aa13.94□□□□□ -0.18
LINC00554-201ENST00000564841 ANKRD37Q7Z713 158 aa13.94□□□□□ -0.18
LINC00554-201ENST00000564841 OR10G3Q8NGC4 313 aa13.94□□□□□ -0.18
LINC00554-201ENST00000564841 OR2T10Q8NGZ9 312 aa13.94□□□□□ -0.18
LINC00554-201ENST00000564841 LOC400499M0QZD8 3231 aa13.94□□□□□ -0.18
LINC00554-201ENST00000564841 CCKARP32238 428 aa13.94□□□□□ -0.18
LINC00554-201ENST00000564841 RBX1P62877 108 aa13.94□□□□□ -0.18
LINC00554-201ENST00000564841 MMDQ15546 238 aa13.94□□□□□ -0.18
LINC00554-201ENST00000564841 THEM4Q5T1C6 240 aa13.94□□□□□ -0.18
LINC00554-201ENST00000564841 FAM78BQ5VT40 261 aa13.94□□□□□ -0.18
LINC00554-201ENST00000564841 Q6ZWC4 215 aa13.94□□□□□ -0.18
LINC00554-201ENST00000564841 GAPTQ8N292 157 aa13.94□□□□□ -0.18
LINC00554-201ENST00000564841 VN1R17PQ8TDU5 208 aa13.94□□□□□ -0.18
LINC00554-201ENST00000564841 CHRNA10Q9GZZ6 450 aa13.94□□□□□ -0.18
LINC00554-201ENST00000564841 MAP1LC3B2A6NCE7 125 aa13.93□□□□□ -0.18
LINC00554-201ENST00000564841 CCL1P22362 96 aa13.93□□□□□ -0.18
LINC00554-201ENST00000564841 SNAI3Q3KNW1 292 aa13.93□□□□□ -0.18
LINC00554-201ENST00000564841 MAP1LC3BQ9GZQ8 125 aa13.93□□□□□ -0.18
LINC00554-201ENST00000564841 PARLQ9H300 379 aa13.93□□□□□ -0.18
LINC00554-201ENST00000564841 PTPRZ1P23471 2315 aaPredicted RBP13.93□□□□□ -0.18
LINC00554-201ENST00000564841 IGKV1D-13A0A0B4J2D9 117 aa13.93□□□□□ -0.18
LINC00554-201ENST00000564841 IGKV1-12A0A0C4DH73 117 aa13.93□□□□□ -0.18
LINC00554-201ENST00000564841 C19orf67A6NJJ6 358 aa13.93□□□□□ -0.18
LINC00554-201ENST00000564841 HRASP01112 189 aa13.93□□□□□ -0.18
LINC00554-201ENST00000564841 IFNA5P01569 189 aa13.93□□□□□ -0.18
LINC00554-201ENST00000564841 IGKV1D-33P01593 117 aa13.93□□□□□ -0.18
LINC00554-201ENST00000564841 IGKV1-33P01594 117 aa13.93□□□□□ -0.18
LINC00554-201ENST00000564841 IGKV1D-12P01611 117 aa13.93□□□□□ -0.18
LINC00554-201ENST00000564841 IGKV1-13P0DP09 117 aa13.93□□□□□ -0.18
LINC00554-201ENST00000564841 SPINK2P20155 84 aa13.93□□□□□ -0.18
LINC00554-201ENST00000564841 ID3Q02535 119 aa13.93□□□□□ -0.18
LINC00554-201ENST00000564841 OR1K1Q8NGR3 316 aa13.93□□□□□ -0.18
LINC00554-201ENST00000564841 OR2V1Q8NHB1 315 aa13.93□□□□□ -0.18
LINC00554-201ENST00000564841 ANGPTL4Q9BY76 406 aa13.93□□□□□ -0.18
LINC00554-201ENST00000564841 OR51I2Q9H344 312 aa13.93□□□□□ -0.18
LINC00554-201ENST00000564841 MOB1AQ9H8S9 216 aa13.93□□□□□ -0.18
LINC00554-201ENST00000564841 TAAR3PQ9P1P4 343 aa13.93□□□□□ -0.18
LINC00554-201ENST00000564841 PGPEP1LA6NFU8 196 aa13.93□□□□□ -0.18
LINC00554-201ENST00000564841 AQP7O14520 342 aa13.93□□□□□ -0.18
LINC00554-201ENST00000564841 RAB7AP51149 207 aa13.93□□□□□ -0.18
LINC00554-201ENST00000564841 RSPO1Q2MKA7 263 aaPredicted RBP13.93□□□□□ -0.18
LINC00554-201ENST00000564841 KMT5CQ86Y97 462 aa13.93□□□□□ -0.18
LINC00554-201ENST00000564841 TMEM105Q8N8V8 129 aa13.93□□□□□ -0.18
LINC00554-201ENST00000564841 TRAV1-1A0A0B4J248 108 aa13.92□□□□□ -0.18
LINC00554-201ENST00000564841 A0A0U1RQK1 487 aa13.92□□□□□ -0.18
LINC00554-201ENST00000564841 ZNF320A2RRD8 509 aa13.92□□□□□ -0.18
LINC00554-201ENST00000564841 FBXW9Q5XUX1 488 aa13.92□□□□□ -0.18
LINC00554-201ENST00000564841 DPPA3Q6W0C5 159 aa13.92□□□□□ -0.18
LINC00554-201ENST00000564841 CYP2G1PQ6ZSU1 146 aa13.92□□□□□ -0.18
LINC00554-201ENST00000564841 CPEB3Q8NE35 698 aaKnown RBP13.92□□□□□ -0.18
LINC00554-201ENST00000564841 ZCCHC14Q8WYQ9 949 aaKnown RBP13.92□□□□□ -0.18
LINC00554-201ENST00000564841 ZNF845Q96IR2 970 aaPredicted RBP13.92□□□□□ -0.18
LINC00554-201ENST00000564841 ARRDC1-AS1Q9H2J1 176 aa13.92□□□□□ -0.18
LINC00554-201ENST00000564841 RNF115Q9Y4L5 304 aa13.92□□□□□ -0.18
LINC00554-201ENST00000564841 LIPT2A6NK58 231 aa13.92□□□□□ -0.18
LINC00554-201ENST00000564841 C1QTNF9BB2RNN3 333 aa13.92□□□□□ -0.18
LINC00554-201ENST00000564841 M0QZK8 103 aa13.92□□□□□ -0.18
LINC00554-201ENST00000564841 HSPB6O14558 160 aa13.92□□□□□ -0.18
LINC00554-201ENST00000564841 GGCTO75223 188 aaKnown RBP13.92□□□□□ -0.18
LINC00554-201ENST00000564841 DHRS3O75911 302 aa13.92□□□□□ -0.18
LINC00554-201ENST00000564841 IL3RAP26951 378 aa13.92□□□□□ -0.18
LINC00554-201ENST00000564841 CEACAM8P31997 349 aaPredicted RBP13.92□□□□□ -0.18
LINC00554-201ENST00000564841 ZNF133P52736 654 aaPredicted RBP13.92□□□□□ -0.18
LINC00554-201ENST00000564841 ZP4Q12836 540 aa13.92□□□□□ -0.18
LINC00554-201ENST00000564841 LHX4Q969G2 390 aa13.92□□□□□ -0.18
LINC00554-201ENST00000564841 IMMP2LQ96T52 175 aa13.92□□□□□ -0.18
LINC00554-201ENST00000564841 MIEN1Q9BRT3 115 aa13.92□□□□□ -0.18
LINC00554-201ENST00000564841 MANBALQ9NQG1 85 aa13.92□□□□□ -0.18
LINC00554-201ENST00000564841 RNF114Q9Y508 228 aa13.92□□□□□ -0.18
LINC00554-201ENST00000564841 CCL25O15444 150 aa13.91□□□□□ -0.18
LINC00554-201ENST00000564841 CHRNB4P30926 498 aa13.91□□□□□ -0.18
LINC00554-201ENST00000564841 COTL1Q14019 142 aa13.91□□□□□ -0.18
LINC00554-201ENST00000564841 TGIF2LYQ8IUE0 185 aa13.91□□□□□ -0.18
LINC00554-201ENST00000564841 CCDC71LQ8N9Z2 235 aa13.91□□□□□ -0.18
LINC00554-201ENST00000564841 OR4F5Q8NH21 305 aa13.91□□□□□ -0.18
LINC00554-201ENST00000564841 OR4F4Q96R69 305 aa13.91□□□□□ -0.18
LINC00554-201ENST00000564841 METTL7AQ9H8H3 244 aa13.91□□□□□ -0.18
LINC00554-201ENST00000564841 GPR35Q9HC97 309 aa13.91□□□□□ -0.18
LINC00554-201ENST00000564841 CCL28Q9NRJ3 127 aa13.91□□□□□ -0.18
LINC00554-201ENST00000564841 TRAPPC1Q9Y5R8 145 aa13.91□□□□□ -0.18
LINC00554-201ENST00000564841 VSTM2BA6NLU5 285 aa13.91□□□□□ -0.18
LINC00554-201ENST00000564841 C3orf80F5H4A9 247 aa13.91□□□□□ -0.18
LINC00554-201ENST00000564841 MDH2P40926 338 aaKnown RBP13.91□□□□□ -0.18
LINC00554-201ENST00000564841 Q6ZRM9 215 aa13.91□□□□□ -0.18
LINC00554-201ENST00000564841 TMPRSS7Q7RTY8 843 aa13.91□□□□□ -0.18
LINC00554-201ENST00000564841 RABEPKQ7Z6M1 372 aa13.91□□□□□ -0.18
LINC00554-201ENST00000564841 WDR5BQ86VZ2 330 aa13.91□□□□□ -0.18
LINC00554-201ENST00000564841 SCGB1C1Q8TD33 95 aa13.91□□□□□ -0.18
LINC00554-201ENST00000564841 SLC25A22Q9H936 323 aa13.91□□□□□ -0.18
LINC00554-201ENST00000564841 PTRH2Q9Y3E5 179 aaKnown RBP13.91□□□□□ -0.18
LINC00554-201ENST00000564841 F2Z2F3 143 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms