RNA–Protein interactions for RNA: ENST00000564676.5

CDH1-206, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-206ENST00000564676 KCTD7Q96MP8 289 aa7.99□□□□□ -1.13
CDH1-206ENST00000564676 RIMS4Q9H426 269 aaPredicted RBP7.99□□□□□ -1.13
CDH1-206ENST00000564676 RANBP3Q9H6Z4 567 aaPredicted RBP7.99□□□□□ -1.13
CDH1-206ENST00000564676 LIN7BQ9HAP6 207 aa7.99□□□□□ -1.13
CDH1-206ENST00000564676 OR2S2Q9NQN1 319 aa7.99□□□□□ -1.13
CDH1-206ENST00000564676 MBNL3Q9NUK0 354 aaKnown RBP7.99□□□□□ -1.13
CDH1-206ENST00000564676 ABRACLQ9P1F3 81 aa7.99□□□□□ -1.13
CDH1-206ENST00000564676 A0A0B4J203 849 aa7.98□□□□□ -1.13
CDH1-206ENST00000564676 NOTOA8MTQ0 251 aa7.98□□□□□ -1.13
CDH1-206ENST00000564676 SLC2A2P11168 524 aaPredicted RBP7.98□□□□□ -1.13
CDH1-206ENST00000564676 RAB7AP51149 207 aa7.98□□□□□ -1.13
CDH1-206ENST00000564676 TMEM50BP56557 158 aa7.98□□□□□ -1.13
CDH1-206ENST00000564676 PROK1P58294 105 aa7.98□□□□□ -1.13
CDH1-206ENST00000564676 PLA2G7Q13093 441 aa7.98□□□□□ -1.13
CDH1-206ENST00000564676 ARSJQ5FYB0 599 aaPredicted RBP7.98□□□□□ -1.13
CDH1-206ENST00000564676 C5orf24Q7Z6I8 188 aa7.98□□□□□ -1.13
CDH1-206ENST00000564676 TPRA1Q86W33 373 aa7.98□□□□□ -1.13
CDH1-206ENST00000564676 LINC00311Q8N616 119 aa7.98□□□□□ -1.13
CDH1-206ENST00000564676 DRAM1Q8N682 238 aa7.98□□□□□ -1.13
CDH1-206ENST00000564676 OR52L2PQ8NGH6 319 aa7.98□□□□□ -1.13
CDH1-206ENST00000564676 OR2T6Q8NHC8 308 aa7.98□□□□□ -1.13
CDH1-206ENST00000564676 SGMS2Q8NHU3 365 aa7.98□□□□□ -1.13
CDH1-206ENST00000564676 GALMQ96C23 342 aa7.98□□□□□ -1.13
CDH1-206ENST00000564676 AKR1E2Q96JD6 320 aa7.98□□□□□ -1.13
CDH1-206ENST00000564676 OCSTAMPQ9BR26 566 aa7.98□□□□□ -1.13
CDH1-206ENST00000564676 PECRQ9BY49 303 aa7.98□□□□□ -1.13
CDH1-206ENST00000564676 AK3Q9UIJ7 227 aa7.98□□□□□ -1.13
CDH1-206ENST00000564676 HSF4Q9ULV5 492 aa7.98□□□□□ -1.13
CDH1-206ENST00000564676 SIGLEC9Q9Y336 463 aa7.98□□□□□ -1.13
CDH1-206ENST00000564676 ANK2Q01484 3957 aa7.97□□□□□ -1.13
CDH1-206ENST00000564676 METTL21EPA6NDL7 271 aa7.97□□□□□ -1.13
CDH1-206ENST00000564676 FOXI3A8MTJ6 420 aaPredicted RBP7.97□□□□□ -1.13
CDH1-206ENST00000564676 HSD17B6O14756 317 aa7.97□□□□□ -1.13
CDH1-206ENST00000564676 TIMM23O14925 209 aa7.97□□□□□ -1.13
CDH1-206ENST00000564676 SLC31A2O15432 143 aa7.97□□□□□ -1.13
CDH1-206ENST00000564676 RGS11O94810 467 aa7.97□□□□□ -1.13
CDH1-206ENST00000564676 NAPSAO96009 420 aa7.97□□□□□ -1.13
CDH1-206ENST00000564676 GAPDHP04406 335 aaKnown RBP7.97□□□□□ -1.13
CDH1-206ENST00000564676 LPLP06858 475 aa7.97□□□□□ -1.13
CDH1-206ENST00000564676 FAM106CPP0CH98 169 aa7.97□□□□□ -1.13
CDH1-206ENST00000564676 RAB6AP20340 208 aa7.97□□□□□ -1.13
CDH1-206ENST00000564676 SDC2P34741 201 aa7.97□□□□□ -1.13
CDH1-206ENST00000564676 REG1BP48304 166 aa7.97□□□□□ -1.13
CDH1-206ENST00000564676 EFNB2P52799 333 aa7.97□□□□□ -1.13
CDH1-206ENST00000564676 MRPS15P82914 257 aaKnown RBP7.97□□□□□ -1.13
CDH1-206ENST00000564676 MXD1Q05195 221 aa7.97□□□□□ -1.13
CDH1-206ENST00000564676 SRSF4Q08170 494 aaKnown RBP7.97□□□□□ -1.13
CDH1-206ENST00000564676 DIAPH2-AS1Q14236 149 aa7.97□□□□□ -1.13
CDH1-206ENST00000564676 HES1Q14469 280 aa7.97□□□□□ -1.13
CDH1-206ENST00000564676 HMGN3Q15651 99 aa7.97□□□□□ -1.13
CDH1-206ENST00000564676 TIMM50Q3ZCQ8 353 aa7.97□□□□□ -1.13
CDH1-206ENST00000564676 Q3ZCU0 254 aa7.97□□□□□ -1.13
CDH1-206ENST00000564676 PLAC9Q5JTB6 97 aa7.97□□□□□ -1.13
CDH1-206ENST00000564676 MOB1BQ7L9L4 216 aa7.97□□□□□ -1.13
CDH1-206ENST00000564676 C16orf82Q7Z2V1 217 aa7.97□□□□□ -1.13
CDH1-206ENST00000564676 MOB3BQ86TA1 216 aa7.97□□□□□ -1.13
CDH1-206ENST00000564676 NR2C2APQ86WQ0 139 aa7.97□□□□□ -1.13
CDH1-206ENST00000564676 OR8H3Q8N146 312 aa7.97□□□□□ -1.13
CDH1-206ENST00000564676 C8orf31Q8N9H6 132 aa7.97□□□□□ -1.13
CDH1-206ENST00000564676 OR56B4Q8NH76 319 aa7.97□□□□□ -1.13
CDH1-206ENST00000564676 IL1F10Q8WWZ1 152 aa7.97□□□□□ -1.13
CDH1-206ENST00000564676 RAB3CQ96E17 227 aa7.97□□□□□ -1.13
CDH1-206ENST00000564676 CMSS1Q9BQ75 279 aaKnown RBP7.97□□□□□ -1.13
CDH1-206ENST00000564676 HDHD3Q9BSH5 251 aaPredicted RBP7.97□□□□□ -1.13
CDH1-206ENST00000564676 SLC25A33Q9BSK2 321 aa7.97□□□□□ -1.13
CDH1-206ENST00000564676 PRSS22Q9GZN4 317 aa7.97□□□□□ -1.13
CDH1-206ENST00000564676 RNF167Q9H6Y7 350 aa7.97□□□□□ -1.13
CDH1-206ENST00000564676 ZNF696Q9H7X3 374 aa7.97□□□□□ -1.13
CDH1-206ENST00000564676 DAPK2Q9UIK4 370 aa7.97□□□□□ -1.13
CDH1-206ENST00000564676 JPT1Q9UK76 154 aa7.97□□□□□ -1.13
CDH1-206ENST00000564676 A0A075B6Q4 140 aa7.96□□□□□ -1.14
CDH1-206ENST00000564676 TRBV6-6A0A0A6YYG2 114 aa7.96□□□□□ -1.14
CDH1-206ENST00000564676 A0A1W2PPI3 338 aa7.96□□□□□ -1.14
CDH1-206ENST00000564676 PEX14O75381 377 aa7.96□□□□□ -1.14
CDH1-206ENST00000564676 OR2F2O95006 317 aa7.96□□□□□ -1.14
CDH1-206ENST00000564676 SNRNP70P08621 437 aaKnown RBP7.96□□□□□ -1.14
CDH1-206ENST00000564676 CD3GP09693 182 aa7.96□□□□□ -1.14
CDH1-206ENST00000564676 CLEC2LP0C7M8 214 aa7.96□□□□□ -1.14
CDH1-206ENST00000564676 PPP1CCP36873 323 aaKnown RBP7.96□□□□□ -1.14
CDH1-206ENST00000564676 ZNF134P52741 427 aa7.96□□□□□ -1.14
CDH1-206ENST00000564676 BLCAPP62952 87 aa7.96□□□□□ -1.14
CDH1-206ENST00000564676 HTD2P86397 168 aa7.96□□□□□ -1.14
CDH1-206ENST00000564676 ZNF816Q0VGE8 651 aaPredicted RBP7.96□□□□□ -1.14
CDH1-206ENST00000564676 GNMTQ14749 295 aa7.96□□□□□ -1.14
CDH1-206ENST00000564676 MOGAT2Q3SYC2 334 aa7.96□□□□□ -1.14
CDH1-206ENST00000564676 MORN2Q502X0 79 aa7.96□□□□□ -1.14
CDH1-206ENST00000564676 CT45A1Q5HYN5 189 aa7.96□□□□□ -1.14
CDH1-206ENST00000564676 STEAP3Q658P3 488 aa7.96□□□□□ -1.14
CDH1-206ENST00000564676 SFXN4Q6P4A7 337 aa7.96□□□□□ -1.14
CDH1-206ENST00000564676 ZNF880Q6PDB4 577 aa7.96□□□□□ -1.14
CDH1-206ENST00000564676 C11orf88Q6PI97 169 aa7.96□□□□□ -1.14
CDH1-206ENST00000564676 SLC25A48Q6ZT89 311 aaKnown RBP7.96□□□□□ -1.14
CDH1-206ENST00000564676 THNSL2Q86YJ6 484 aa7.96□□□□□ -1.14
CDH1-206ENST00000564676 LYG1Q8N1E2 194 aa7.96□□□□□ -1.14
CDH1-206ENST00000564676 OR10R2Q8NGX6 335 aa7.96□□□□□ -1.14
CDH1-206ENST00000564676 CT45A3Q8NHU0 189 aa7.96□□□□□ -1.14
CDH1-206ENST00000564676 PTX4Q96A99 478 aa7.96□□□□□ -1.14
CDH1-206ENST00000564676 RBM14Q96PK6 669 aaKnown RBP7.96□□□□□ -1.14
CDH1-206ENST00000564676 CENPOQ9BU64 300 aa7.96□□□□□ -1.14
CDH1-206ENST00000564676 ATG5Q9H1Y0 275 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms