RNA–Protein interactions for RNA: ENST00000564172.1

GDE1-203, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene GDE1, Length 2,238 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-203ENST00000564172 SERPINA2P20848 420 aa15.05■□□□□ -0
GDE1-203ENST00000564172 CA6P23280 308 aa15.05■□□□□ -0
GDE1-203ENST00000564172 BTNL8Q6UX41 500 aa15.05■□□□□ -0
GDE1-203ENST00000564172 CALHM1Q8IU99 346 aa15.05■□□□□ -0
GDE1-203ENST00000564172 C1orf174Q8IYL3 243 aa15.05■□□□□ -0
GDE1-203ENST00000564172 NUDT10Q8NFP7 164 aa15.05■□□□□ -0
GDE1-203ENST00000564172 OR5P3Q8WZ94 311 aa15.05■□□□□ -0
GDE1-203ENST00000564172 NICN1Q9BSH3 213 aa15.05■□□□□ -0
GDE1-203ENST00000564172 HEATR1Q9H583 2144 aaKnown RBP15.05■□□□□ -0
GDE1-203ENST00000564172 CADP27708 2225 aa15.04■□□□□ -0
GDE1-203ENST00000564172 WIPF3A6NGB9 483 aa15.04■□□□□ -0
GDE1-203ENST00000564172 IQCF6A8MYZ5 107 aa15.04■□□□□ -0
GDE1-203ENST00000564172 M0R036 132 aa15.04■□□□□ -0
GDE1-203ENST00000564172 CRYAAP02489 173 aa15.04■□□□□ -0
GDE1-203ENST00000564172 GPM6AP51674 278 aa15.04■□□□□ -0
GDE1-203ENST00000564172 DLK1P80370 383 aa15.04■□□□□ -0
GDE1-203ENST00000564172 COMMD1Q8N668 190 aa15.04■□□□□ -0
GDE1-203ENST00000564172 A0A0A6YYD4 124 aa15.04■□□□□ -0
GDE1-203ENST00000564172 ZNF732B4DXR9 585 aa15.04■□□□□ -0
GDE1-203ENST00000564172 C9JQL5 133 aa15.04■□□□□ -0
GDE1-203ENST00000564172 TGOLN2O43493 480 aa15.04■□□□□ -0
GDE1-203ENST00000564172 SCGNO76038 276 aa15.04■□□□□ -0
GDE1-203ENST00000564172 OR2C1O95371 312 aa15.04■□□□□ -0
GDE1-203ENST00000564172 CHRM2P08172 466 aa15.04■□□□□ -0
GDE1-203ENST00000564172 SELEP16581 610 aa15.04■□□□□ -0
GDE1-203ENST00000564172 HIST1H2BLQ99880 126 aa15.04■□□□□ -0
GDE1-203ENST00000564172 URM1Q9BTM9 101 aaKnown RBP15.04■□□□□ -0
GDE1-203ENST00000564172 ZMAT3Q9HA38 289 aaKnown RBP15.04■□□□□ -0
GDE1-203ENST00000564172 YLPM1P49750 1951 aaKnown RBP15.03■□□□□ -0
GDE1-203ENST00000564172 IGKV1-12A0A0C4DH73 117 aa15.03■□□□□ -0
GDE1-203ENST00000564172 IGKV1D-12P01611 117 aa15.03■□□□□ -0
GDE1-203ENST00000564172 UBE2MP61081 183 aaKnown RBP15.03■□□□□ -0
GDE1-203ENST00000564172 FAM189A2Q15884 450 aa15.03■□□□□ -0
GDE1-203ENST00000564172 ZNF718Q3SXZ3 478 aa15.03■□□□□ -0
GDE1-203ENST00000564172 ZNF611Q8N823 705 aa15.03■□□□□ -0
GDE1-203ENST00000564172 RELNP78509 3460 aa15.03■□□□□ -0
GDE1-203ENST00000564172 ARG1P05089 322 aa15.02■□□□□ -0
GDE1-203ENST00000564172 OR5AC1P0C628 307 aa15.02■□□□□ -0
GDE1-203ENST00000564172 CHRNB4P30926 498 aa15.02■□□□□ -0
GDE1-203ENST00000564172 PRSS3P35030 304 aa15.02■□□□□ -0
GDE1-203ENST00000564172 FABP6P51161 128 aa15.02■□□□□ -0
GDE1-203ENST00000564172 BEX5Q5H9J7 111 aa15.02■□□□□ -0
GDE1-203ENST00000564172 LEMD1Q68G75 181 aa15.02■□□□□ -0
GDE1-203ENST00000564172 FAM89BQ8N5H3 189 aa15.02■□□□□ -0
GDE1-203ENST00000564172 OR51F2Q8NH61 342 aa15.02■□□□□ -0
GDE1-203ENST00000564172 TMED6Q8WW62 240 aa15.02■□□□□ -0
GDE1-203ENST00000564172 NUDT16L1Q9BRJ7 211 aaKnown RBP15.02■□□□□ -0
GDE1-203ENST00000564172 PARD6GQ9BYG4 376 aaPredicted RBP15.02■□□□□ -0
GDE1-203ENST00000564172 SELENOIQ9C0D9 397 aa15.02■□□□□ -0
GDE1-203ENST00000564172 PARP11Q9NR21 331 aa15.02■□□□□ -0
GDE1-203ENST00000564172 OR5B21A6NL26 309 aa15.02□□□□□ -0.01
GDE1-203ENST00000564172 SOCS1O15524 211 aa15.02□□□□□ -0.01
GDE1-203ENST00000564172 SIAH2O43255 324 aa15.02□□□□□ -0.01
GDE1-203ENST00000564172 CSTBP04080 98 aaKnown RBP15.02□□□□□ -0.01
GDE1-203ENST00000564172 ASCL1P50553 236 aa15.02□□□□□ -0.01
GDE1-203ENST00000564172 ADORA2A-AS1P86434 159 aa15.02□□□□□ -0.01
GDE1-203ENST00000564172 ZNF260Q3ZCT1 412 aa15.02□□□□□ -0.01
GDE1-203ENST00000564172 MBNL2Q5VZF2 373 aaKnown RBP15.02□□□□□ -0.01
GDE1-203ENST00000564172 CHST4Q8NCG5 386 aa15.02□□□□□ -0.01
GDE1-203ENST00000564172 OR51T1Q8NGJ9 327 aa15.02□□□□□ -0.01
GDE1-203ENST00000564172 LYPD6BQ8NI32 183 aa15.02□□□□□ -0.01
GDE1-203ENST00000564172 TM2D1Q9BX74 207 aa15.02□□□□□ -0.01
GDE1-203ENST00000564172 SLC25A31Q9H0C2 315 aa15.02□□□□□ -0.01
GDE1-203ENST00000564172 FZR1Q9UM11 496 aa15.02□□□□□ -0.01
GDE1-203ENST00000564172 DFFBO76075 338 aa15.01□□□□□ -0.01
GDE1-203ENST00000564172 THBDP07204 575 aa15.01□□□□□ -0.01
GDE1-203ENST00000564172 KITLGP21583 273 aa15.01□□□□□ -0.01
GDE1-203ENST00000564172 CD40P25942 277 aa15.01□□□□□ -0.01
GDE1-203ENST00000564172 GCH1P30793 250 aa15.01□□□□□ -0.01
GDE1-203ENST00000564172 TMEM50BP56557 158 aa15.01□□□□□ -0.01
GDE1-203ENST00000564172 GNG3P63215 75 aa15.01□□□□□ -0.01
GDE1-203ENST00000564172 GUCA2AQ02747 115 aa15.01□□□□□ -0.01
GDE1-203ENST00000564172 SLC25A26Q70HW3 274 aa15.01□□□□□ -0.01
GDE1-203ENST00000564172 SSX8Q7RTT4 187 aa15.01□□□□□ -0.01
GDE1-203ENST00000564172 ZSCAN4Q8NAM6 433 aaPredicted RBP15.01□□□□□ -0.01
GDE1-203ENST00000564172 AQP3Q92482 292 aa15.01□□□□□ -0.01
GDE1-203ENST00000564172 CYTL1Q9NRR1 136 aa15.01□□□□□ -0.01
GDE1-203ENST00000564172 ZNF230Q9UIE0 474 aaPredicted RBP15.01□□□□□ -0.01
GDE1-203ENST00000564172 A0A1W2PPE2 198 aa15.01□□□□□ -0.01
GDE1-203ENST00000564172 TCF21O43680 179 aa15.01□□□□□ -0.01
GDE1-203ENST00000564172 GTF2F2P13984 249 aa15.01□□□□□ -0.01
GDE1-203ENST00000564172 RPS23P62266 143 aaKnown RBP15.01□□□□□ -0.01
GDE1-203ENST00000564172 WFDC8Q8IUA0 241 aa15.01□□□□□ -0.01
GDE1-203ENST00000564172 OR8G5Q8NG78 346 aa15.01□□□□□ -0.01
GDE1-203ENST00000564172 GPX8Q8TED1 209 aa15.01□□□□□ -0.01
GDE1-203ENST00000564172 SEH1LQ96EE3 360 aa15.01□□□□□ -0.01
GDE1-203ENST00000564172 IL36GQ9NZH8 169 aa15.01□□□□□ -0.01
GDE1-203ENST00000564172 MTFP1Q9UDX5 166 aa15.01□□□□□ -0.01
GDE1-203ENST00000564172 ZFP30Q9Y2G7 519 aa15.01□□□□□ -0.01
GDE1-203ENST00000564172 TRBV6-7A0A0A0MS04 114 aa15□□□□□ -0.01
GDE1-203ENST00000564172 TMEM235A6NFC5 223 aa15□□□□□ -0.01
GDE1-203ENST00000564172 OPN1MWP04001 364 aa15□□□□□ -0.01
GDE1-203ENST00000564172 OPN1MW2P0DN77 364 aa15□□□□□ -0.01
GDE1-203ENST00000564172 OPN1MW3P0DN78 364 aa15□□□□□ -0.01
GDE1-203ENST00000564172 GLRXP35754 106 aa15□□□□□ -0.01
GDE1-203ENST00000564172 GFI1BQ5VTD9 330 aa15□□□□□ -0.01
GDE1-203ENST00000564172 FAAP20Q6NZ36 180 aa15□□□□□ -0.01
GDE1-203ENST00000564172 OR8S1Q8NH09 359 aa15□□□□□ -0.01
GDE1-203ENST00000564172 PPP1R1CQ8WVI7 109 aa15□□□□□ -0.01
GDE1-203ENST00000564172 SECTM1Q8WVN6 248 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms