RNA–Protein interactions for RNA: ENST00000563952.1

CMTM4-204, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-204ENST00000563952 LPLP06858 475 aa24.52■■□□□ 1.52
CMTM4-204ENST00000563952 TMEM11P17152 192 aa24.52■■□□□ 1.52
CMTM4-204ENST00000563952 HNF4GQ14541 408 aa24.52■■□□□ 1.52
CMTM4-204ENST00000563952 Q3ZCU0 254 aa24.52■■□□□ 1.52
CMTM4-204ENST00000563952 C9orf152Q5JTZ5 239 aa24.52■■□□□ 1.52
CMTM4-204ENST00000563952 SPARTQ8N0X7 666 aa24.52■■□□□ 1.52
CMTM4-204ENST00000563952 WNT10AQ9GZT5 417 aa24.52■■□□□ 1.52
CMTM4-204ENST00000563952 CHMP1AQ9HD42 196 aaPredicted RBP24.52■■□□□ 1.52
CMTM4-204ENST00000563952 OR2S2Q9NQN1 319 aa24.52■■□□□ 1.52
CMTM4-204ENST00000563952 PLEKHJ1Q9NW61 149 aa24.52■■□□□ 1.52
CMTM4-204ENST00000563952 MOB4Q9Y3A3 225 aa24.52■■□□□ 1.52
CMTM4-204ENST00000563952 IGHV1-3A0A0C4DH29 117 aa24.51■■□□□ 1.51
CMTM4-204ENST00000563952 IGKV1D-33P01593 117 aa24.51■■□□□ 1.51
CMTM4-204ENST00000563952 IGKV1-33P01594 117 aa24.51■■□□□ 1.51
CMTM4-204ENST00000563952 AMY1AP04745 511 aa24.51■■□□□ 1.51
CMTM4-204ENST00000563952 AMY2AP04746 511 aa24.51■■□□□ 1.51
CMTM4-204ENST00000563952 CD28P10747 220 aa24.51■■□□□ 1.51
CMTM4-204ENST00000563952 HES5Q5TA89 166 aa24.51■■□□□ 1.51
CMTM4-204ENST00000563952 LYG1Q8N1E2 194 aa24.51■■□□□ 1.51
CMTM4-204ENST00000563952 ZNF439Q8NDP4 499 aa24.51■■□□□ 1.51
CMTM4-204ENST00000563952 RRP15Q9Y3B9 282 aaKnown RBP24.51■■□□□ 1.51
CMTM4-204ENST00000563952 WNK1Q9H4A3 2382 aa24.5■■□□□ 1.51
CMTM4-204ENST00000563952 IGHV3-72A0A0B4J1Y9 119 aa24.5■■□□□ 1.51
CMTM4-204ENST00000563952 M0QZK8 103 aa24.5■■□□□ 1.51
CMTM4-204ENST00000563952 SOCS1O15524 211 aa24.5■■□□□ 1.51
CMTM4-204ENST00000563952 PSMB9P28065 219 aa24.5■■□□□ 1.51
CMTM4-204ENST00000563952 PSMD7P51665 324 aa24.5■■□□□ 1.51
CMTM4-204ENST00000563952 ZNF134P52741 427 aa24.5■■□□□ 1.51
CMTM4-204ENST00000563952 GNMTQ14749 295 aa24.5■■□□□ 1.51
CMTM4-204ENST00000563952 CT45A1Q5HYN5 189 aa24.5■■□□□ 1.51
CMTM4-204ENST00000563952 UBE2UQ5VVX9 321 aa24.5■■□□□ 1.51
CMTM4-204ENST00000563952 SLC25A48Q6ZT89 311 aaKnown RBP24.5■■□□□ 1.51
CMTM4-204ENST00000563952 ZNF554Q86TJ5 538 aa24.5■■□□□ 1.51
CMTM4-204ENST00000563952 OR52L2PQ8NGH6 319 aa24.5■■□□□ 1.51
CMTM4-204ENST00000563952 CT45A3Q8NHU0 189 aa24.5■■□□□ 1.51
CMTM4-204ENST00000563952 FAM3DQ96BQ1 224 aa24.5■■□□□ 1.51
CMTM4-204ENST00000563952 YTHDF1Q9BYJ9 559 aaKnown RBP24.5■■□□□ 1.51
CMTM4-204ENST00000563952 PDCD5O14737 125 aa24.49■■□□□ 1.51
CMTM4-204ENST00000563952 MYL9P24844 172 aa24.49■■□□□ 1.51
CMTM4-204ENST00000563952 CD200R1LQ6Q8B3 271 aa24.49■■□□□ 1.51
CMTM4-204ENST00000563952 SETD6Q8TBK2 473 aa24.49■■□□□ 1.51
CMTM4-204ENST00000563952 RTN4IP1Q8WWV3 396 aaPredicted RBP24.49■■□□□ 1.51
CMTM4-204ENST00000563952 LRRC42Q9Y546 428 aa24.49■■□□□ 1.51
CMTM4-204ENST00000563952 TRDV1A0A1B0GX56 115 aa24.48■■□□□ 1.51
CMTM4-204ENST00000563952 OR10A3P58181 314 aa24.48■■□□□ 1.51
CMTM4-204ENST00000563952 NSUN5P1Q3KNT7 163 aa24.48■■□□□ 1.51
CMTM4-204ENST00000563952 C2orf76Q3KRA6 126 aa24.48■■□□□ 1.51
CMTM4-204ENST00000563952 MORN2Q502X0 79 aa24.48■■□□□ 1.51
CMTM4-204ENST00000563952 WIPF2Q8TF74 440 aaPredicted RBP24.48■■□□□ 1.51
CMTM4-204ENST00000563952 ST6GALNAC6Q969X2 333 aa24.48■■□□□ 1.51
CMTM4-204ENST00000563952 STEAP1Q9UHE8 339 aa24.48■■□□□ 1.51
CMTM4-204ENST00000563952 VWFP04275 2813 aa24.47■■□□□ 1.51
CMTM4-204ENST00000563952 TRAV1-2A0A0B4J238 106 aa24.47■■□□□ 1.51
CMTM4-204ENST00000563952 SHISA3A0PJX4 238 aa24.47■■□□□ 1.51
CMTM4-204ENST00000563952 PPP1CCP36873 323 aaKnown RBP24.47■■□□□ 1.51
CMTM4-204ENST00000563952 VEGFCP49767 419 aa24.47■■□□□ 1.51
CMTM4-204ENST00000563952 C22orf42Q6IC83 251 aa24.47■■□□□ 1.51
CMTM4-204ENST00000563952 FAM89BQ8N5H3 189 aa24.47■■□□□ 1.51
CMTM4-204ENST00000563952 GALMQ96C23 342 aa24.47■■□□□ 1.51
CMTM4-204ENST00000563952 ABRACLQ9P1F3 81 aa24.47■■□□□ 1.51
CMTM4-204ENST00000563952 JPT1Q9UK76 154 aa24.47■■□□□ 1.51
CMTM4-204ENST00000563952 NAPSAO96009 420 aa24.46■■□□□ 1.51
CMTM4-204ENST00000563952 RANBP1P43487 201 aa24.46■■□□□ 1.51
CMTM4-204ENST00000563952 HMGN3Q15651 99 aa24.46■■□□□ 1.51
CMTM4-204ENST00000563952 FCGR1BQ92637 280 aa24.46■■□□□ 1.51
CMTM4-204ENST00000563952 AK3Q9UIJ7 227 aa24.46■■□□□ 1.51
CMTM4-204ENST00000563952 HTD2P86397 168 aa24.45■■□□□ 1.5
CMTM4-204ENST00000563952 Q6ZPA2 131 aa24.45■■□□□ 1.5
CMTM4-204ENST00000563952 CENPVQ7Z7K6 275 aaPredicted RBP24.45■■□□□ 1.5
CMTM4-204ENST00000563952 TGIF2LXQ8IUE1 241 aa24.45■■□□□ 1.5
CMTM4-204ENST00000563952 OR5AU1Q8NGC0 362 aa24.45■■□□□ 1.5
CMTM4-204ENST00000563952 IL1F10Q8WWZ1 152 aa24.45■■□□□ 1.5
CMTM4-204ENST00000563952 CITED2Q99967 270 aaPredicted RBP24.45■■□□□ 1.5
CMTM4-204ENST00000563952 HDHD3Q9BSH5 251 aaPredicted RBP24.45■■□□□ 1.5
CMTM4-204ENST00000563952 TMEM272A0A1B0GTI8 110 aa24.44■■□□□ 1.5
CMTM4-204ENST00000563952 PLA2G7Q13093 441 aa24.44■■□□□ 1.5
CMTM4-204ENST00000563952 ZNF773Q6PK81 442 aa24.44■■□□□ 1.5
CMTM4-204ENST00000563952 IZUMO1Q8IYV9 350 aa24.44■■□□□ 1.5
CMTM4-204ENST00000563952 C5orf56Q8N8D9 126 aa24.44■■□□□ 1.5
CMTM4-204ENST00000563952 ARHGAP5-AS1Q96IT6 56 aa24.44■■□□□ 1.5
CMTM4-204ENST00000563952 EAF1Q96JC9 268 aaPredicted RBP24.44■■□□□ 1.5
CMTM4-204ENST00000563952 ABHD14AQ9BUJ0 271 aa24.44■■□□□ 1.5
CMTM4-204ENST00000563952 FOXI3A8MTJ6 420 aaPredicted RBP24.43■■□□□ 1.5
CMTM4-204ENST00000563952 RAB3BP20337 219 aa24.43■■□□□ 1.5
CMTM4-204ENST00000563952 GALP22466 123 aa24.43■■□□□ 1.5
CMTM4-204ENST00000563952 ZNF137PP52743 207 aa24.43■■□□□ 1.5
CMTM4-204ENST00000563952 STEAP3Q658P3 488 aa24.43■■□□□ 1.5
CMTM4-204ENST00000563952 MOB1BQ7L9L4 216 aa24.43■■□□□ 1.5
CMTM4-204ENST00000563952 OR56B1Q8NGI3 324 aa24.43■■□□□ 1.5
CMTM4-204ENST00000563952 OR2T10Q8NGZ9 312 aa24.43■■□□□ 1.5
CMTM4-204ENST00000563952 PECRQ9BY49 303 aa24.43■■□□□ 1.5
CMTM4-204ENST00000563952 RIMS4Q9H426 269 aaPredicted RBP24.43■■□□□ 1.5
CMTM4-204ENST00000563952 HSF4Q9ULV5 492 aa24.43■■□□□ 1.5
CMTM4-204ENST00000563952 IFITM5A6NNB3 132 aa24.42■■□□□ 1.5
CMTM4-204ENST00000563952 LDLRAD4O15165 306 aa24.42■■□□□ 1.5
CMTM4-204ENST00000563952 TXNL1O43396 289 aa24.42■■□□□ 1.5
CMTM4-204ENST00000563952 YPEL1O60688 119 aa24.42■■□□□ 1.5
CMTM4-204ENST00000563952 RGS11O94810 467 aa24.42■■□□□ 1.5
CMTM4-204ENST00000563952 TMEM50BP56557 158 aa24.42■■□□□ 1.5
CMTM4-204ENST00000563952 EBI3Q14213 229 aa24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms