RNA–Protein interactions for RNA: ENST00000563798.1

VPS9D1-203, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 459 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-203ENST00000563798 LANCL1O43813 399 aa13.53□□□□□ -0.24
VPS9D1-203ENST00000563798 GNAO1P09471 354 aa13.53□□□□□ -0.24
VPS9D1-203ENST00000563798 RCC1P18754 421 aaPredicted RBP13.53□□□□□ -0.24
VPS9D1-203ENST00000563798 MAPK3P27361 379 aaPredicted RBP13.53□□□□□ -0.24
VPS9D1-203ENST00000563798 LY6G6FQ5SQ64 297 aa13.53□□□□□ -0.24
VPS9D1-203ENST00000563798 RNLSQ5VYX0 342 aa13.53□□□□□ -0.24
VPS9D1-203ENST00000563798 OR1L1Q8NH94 360 aa13.53□□□□□ -0.24
VPS9D1-203ENST00000563798 SELENOIQ9C0D9 397 aa13.53□□□□□ -0.24
VPS9D1-203ENST00000563798 BANF2Q9H503 90 aa13.53□□□□□ -0.24
VPS9D1-203ENST00000563798 WI2-2373I1.2A0A1W2PRP0 233 aa13.52□□□□□ -0.25
VPS9D1-203ENST00000563798 ZNF736B4DX44 427 aaPredicted RBP13.52□□□□□ -0.25
VPS9D1-203ENST00000563798 MYL12BO14950 172 aa13.52□□□□□ -0.25
VPS9D1-203ENST00000563798 PDCD6O75340 191 aa13.52□□□□□ -0.25
VPS9D1-203ENST00000563798 IGF1P05019 195 aa13.52□□□□□ -0.25
VPS9D1-203ENST00000563798 ELANEP08246 267 aa13.52□□□□□ -0.25
VPS9D1-203ENST00000563798 CD37P11049 281 aa13.52□□□□□ -0.25
VPS9D1-203ENST00000563798 CDX1P47902 265 aaPredicted RBP13.52□□□□□ -0.25
VPS9D1-203ENST00000563798 CFHR3Q02985 330 aa13.52□□□□□ -0.25
VPS9D1-203ENST00000563798 FOXE3Q13461 319 aa13.52□□□□□ -0.25
VPS9D1-203ENST00000563798 MORN2Q502X0 79 aa13.52□□□□□ -0.25
VPS9D1-203ENST00000563798 C6orf141Q5SZD1 244 aa13.52□□□□□ -0.25
VPS9D1-203ENST00000563798 OGFRL1Q5TC84 451 aaPredicted RBP13.52□□□□□ -0.25
VPS9D1-203ENST00000563798 UNQ9370/PRO34162Q6UXP9 181 aa13.52□□□□□ -0.25
VPS9D1-203ENST00000563798 KLHL30-AS1Q8NEE0 82 aa13.52□□□□□ -0.25
VPS9D1-203ENST00000563798 DPF1Q92782 380 aa13.52□□□□□ -0.25
VPS9D1-203ENST00000563798 TAF9BQ9HBM6 251 aa13.52□□□□□ -0.25
VPS9D1-203ENST00000563798 NUDT19A8MXV4 375 aa13.51□□□□□ -0.25
VPS9D1-203ENST00000563798 CRTAPO75718 401 aaPredicted RBP13.51□□□□□ -0.25
VPS9D1-203ENST00000563798 UBBP0CG47 229 aa13.51□□□□□ -0.25
VPS9D1-203ENST00000563798 HOXD3P31249 432 aaPredicted RBP13.51□□□□□ -0.25
VPS9D1-203ENST00000563798 GP2P55259 537 aaKnown RBP13.51□□□□□ -0.25
VPS9D1-203ENST00000563798 HTD2P86397 168 aa13.51□□□□□ -0.25
VPS9D1-203ENST00000563798 GPR50Q13585 617 aa13.51□□□□□ -0.25
VPS9D1-203ENST00000563798 RCN1Q15293 331 aa13.51□□□□□ -0.25
VPS9D1-203ENST00000563798 AHSA2Q719I0 299 aa13.51□□□□□ -0.25
VPS9D1-203ENST00000563798 MRPL30Q8TCC3 161 aaKnown RBP13.51□□□□□ -0.25
VPS9D1-203ENST00000563798 RASL11BQ9BPW5 248 aa13.51□□□□□ -0.25
VPS9D1-203ENST00000563798 CHCHD6Q9BRQ6 235 aa13.51□□□□□ -0.25
VPS9D1-203ENST00000563798 CST11Q9H112 138 aa13.51□□□□□ -0.25
VPS9D1-203ENST00000563798 DCLRE1BQ9H816 532 aa13.51□□□□□ -0.25
VPS9D1-203ENST00000563798 OR2S2Q9NQN1 319 aa13.51□□□□□ -0.25
VPS9D1-203ENST00000563798 ZMAT5Q9UDW3 170 aaKnown RBP13.51□□□□□ -0.25
VPS9D1-203ENST00000563798 JPT1Q9UK76 154 aa13.51□□□□□ -0.25
VPS9D1-203ENST00000563798 LRRC42Q9Y546 428 aa13.51□□□□□ -0.25
VPS9D1-203ENST00000563798 PNMA8CA0A1B0GUJ8 204 aa13.5□□□□□ -0.25
VPS9D1-203ENST00000563798 RRP9O43818 475 aaKnown RBP13.5□□□□□ -0.25
VPS9D1-203ENST00000563798 IGHG4P01861 327 aa13.5□□□□□ -0.25
VPS9D1-203ENST00000563798 F2RL1P55085 397 aa13.5□□□□□ -0.25
VPS9D1-203ENST00000563798 LSAMPQ13449 338 aa13.5□□□□□ -0.25
VPS9D1-203ENST00000563798 KIR2DS1Q14954 304 aa13.5□□□□□ -0.25
VPS9D1-203ENST00000563798 CXorf66Q5JRM2 361 aaPredicted RBP13.5□□□□□ -0.25
VPS9D1-203ENST00000563798 C1orf100Q5SVJ3 147 aa13.5□□□□□ -0.25
VPS9D1-203ENST00000563798 MS4A15Q8N5U1 240 aa13.5□□□□□ -0.25
VPS9D1-203ENST00000563798 OR10V1Q8NGI7 309 aa13.5□□□□□ -0.25
VPS9D1-203ENST00000563798 PHYHIPQ92561 330 aa13.5□□□□□ -0.25
VPS9D1-203ENST00000563798 RAX2Q96IS3 184 aa13.5□□□□□ -0.25
VPS9D1-203ENST00000563798 KCNIP1Q9NZI2 227 aa13.5□□□□□ -0.25
VPS9D1-203ENST00000563798 ERGIC3Q9Y282 383 aa13.5□□□□□ -0.25
VPS9D1-203ENST00000563798 COL7A1Q02388 2944 aa13.5□□□□□ -0.25
VPS9D1-203ENST00000563798 CCL24O00175 119 aa13.49□□□□□ -0.25
VPS9D1-203ENST00000563798 YPEL1O60688 119 aa13.49□□□□□ -0.25
VPS9D1-203ENST00000563798 RPLP1P05386 114 aaKnown RBP13.49□□□□□ -0.25
VPS9D1-203ENST00000563798 CHATP28329 748 aa13.49□□□□□ -0.25
VPS9D1-203ENST00000563798 SOX6P35712 828 aa13.49□□□□□ -0.25
VPS9D1-203ENST00000563798 ODF3L1Q8IXM7 274 aa13.49□□□□□ -0.25
VPS9D1-203ENST00000563798 PRR18Q8N4B5 295 aa13.49□□□□□ -0.25
VPS9D1-203ENST00000563798 BPIFB6Q8NFQ5 453 aa13.49□□□□□ -0.25
VPS9D1-203ENST00000563798 OR8U1Q8NH10 309 aa13.49□□□□□ -0.25
VPS9D1-203ENST00000563798 TFAP2CQ92754 450 aa13.49□□□□□ -0.25
VPS9D1-203ENST00000563798 YPEL2Q96QA6 119 aa13.49□□□□□ -0.25
VPS9D1-203ENST00000563798 HSPB9Q9BQS6 159 aa13.49□□□□□ -0.25
VPS9D1-203ENST00000563798 UBE2QL1A1L167 161 aa13.48□□□□□ -0.25
VPS9D1-203ENST00000563798 CDK1P06493 297 aa13.48□□□□□ -0.25
VPS9D1-203ENST00000563798 DCTN2Q13561 401 aaKnown RBP13.48□□□□□ -0.25
VPS9D1-203ENST00000563798 ACSM3Q53FZ2 586 aa13.48□□□□□ -0.25
VPS9D1-203ENST00000563798 VAX1Q5SQQ9 334 aa13.48□□□□□ -0.25
VPS9D1-203ENST00000563798 LRRTM1Q86UE6 522 aa13.48□□□□□ -0.25
VPS9D1-203ENST00000563798 OR52L2PQ8NGH6 319 aa13.48□□□□□ -0.25
VPS9D1-203ENST00000563798 MYOZ3Q8TDC0 251 aa13.48□□□□□ -0.25
VPS9D1-203ENST00000563798 CYYR1Q96J86 154 aa13.48□□□□□ -0.25
VPS9D1-203ENST00000563798 ABHD14AQ9BUJ0 271 aa13.48□□□□□ -0.25
VPS9D1-203ENST00000563798 OR5H8P0DN80 308 aa13.47□□□□□ -0.25
VPS9D1-203ENST00000563798 VSIG8P0DPA2 414 aa13.47□□□□□ -0.25
VPS9D1-203ENST00000563798 VDAC1P21796 283 aa13.47□□□□□ -0.25
VPS9D1-203ENST00000563798 PSMB8P28062 276 aa13.47□□□□□ -0.25
VPS9D1-203ENST00000563798 RPS27AP62979 156 aaKnown RBP13.47□□□□□ -0.25
VPS9D1-203ENST00000563798 GNMTQ14749 295 aa13.47□□□□□ -0.25
VPS9D1-203ENST00000563798 HMGN3Q15651 99 aa13.47□□□□□ -0.25
VPS9D1-203ENST00000563798 DEFB121Q5J5C9 76 aa13.47□□□□□ -0.25
VPS9D1-203ENST00000563798 GLT8D1Q68CQ7 371 aa13.47□□□□□ -0.25
VPS9D1-203ENST00000563798 ZNF833PQ6ZTB9 187 aa13.47□□□□□ -0.25
VPS9D1-203ENST00000563798 FAM46BQ96A09 425 aa13.47□□□□□ -0.25
VPS9D1-203ENST00000563798 GALMQ96C23 342 aa13.47□□□□□ -0.25
VPS9D1-203ENST00000563798 NABP2Q9BQ15 211 aa13.47□□□□□ -0.25
VPS9D1-203ENST00000563798 MND1Q9BWT6 205 aa13.47□□□□□ -0.25
VPS9D1-203ENST00000563798 TM2D1Q9BX74 207 aa13.47□□□□□ -0.25
VPS9D1-203ENST00000563798 LSM2Q9Y333 95 aaKnown RBP13.47□□□□□ -0.25
VPS9D1-203ENST00000563798 DNAH9Q9NYC9 4486 aa13.47□□□□□ -0.25
VPS9D1-203ENST00000563798 RAMP3O60896 148 aa13.46□□□□□ -0.25
VPS9D1-203ENST00000563798 RGS11O94810 467 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms